GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:00:42

Sequence gi568815576r:36658314_36867865 : 209552 bp : 49.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  21566  22171  606  1  0   27  -68  1335 0.966 107.12
 1.02 Term +  22173  22610  438  2  0   49   48   639 0.997  51.28
 1.03 PlyA +  24062  24067    6                               1.05

 2.00 Prom +  26358  26397   40                              -6.36
 2.01 Init +  30976  30982    7  0  1   54   99     5 0.198  -0.98
 2.02 Intr +  31828  31913   86  2  2   43   76    74 0.200   1.24
 2.03 Intr +  32060  32235  176  1  2   86  111   -20 0.446  -1.16
 2.04 Intr +  32747  32890  144  2  0   94   75    88 0.673   7.50
 2.05 Intr +  35607  35739  133  0  1   67   95    13 0.514   0.55
 2.06 Term +  40177  40299  123  0  0  109   40    41 0.305  -0.22
 2.07 PlyA +  42082  42087    6                               1.05

 3.02 PlyA -  43357  43352    6                               1.05
 3.01 Sngl -  47978  47745  234  2  0   69   36   347 0.709  22.70
 3.00 Prom -  49524  49485   40                              -3.96

 4.00 Prom +  56117  56156   40                              -4.36
 4.01 Init +  70432  70463   32  0  2   82   94    44 0.210   1.69
 4.02 Intr +  72132  72241  110  0  2   90   64    76 0.296   5.33
 4.03 Term +  81523  81605   83  2  2   85   37    90 0.252   1.46
 4.04 PlyA +  82152  82157    6                               1.05

 5.05 PlyA -  82316  82311    6                              -0.45
 5.04 Term -  82437  82355   83  1  2  100   37    91 0.528   3.06
 5.03 Intr -  85923  85820  104  2  2   43   25    59 0.174  -5.08
 5.02 Intr -  86160  85975  186  2  0   96   97    41 0.432   4.60
 5.01 Init -  87480  87416   65  0  2   51  113    60 0.753   5.42
 5.00 Prom -  93222  93183   40                              -5.96

 6.09 PlyA -  95535  95530    6                               1.05
 6.08 Term - 100096  99998   99  1  0   58   49   132 0.870   4.43
 6.07 Intr - 104700 104591  110  1  2   39   89    60 0.808   1.20
 6.06 Intr - 105550 105440  111  2  0   41  109    85 0.932   6.25
 6.05 Intr - 105723 105606  118  0  1   79   96   128 0.998  12.74
 6.04 Intr - 109052 108993   60  2  0  114   89    73 0.995   8.93
 6.03 Intr - 109549 109470   80  2  2   89   93    86 0.974   8.47
 6.02 Intr - 117481 117361  121  1  1  113  109    66 0.897  11.27
 6.01 Init - 121641 121570   72  0  0   84   41    66 0.360   2.57
 6.00 Prom - 121690 121651   40                              -8.06

 7.14 PlyA - 122151 122146    6                               1.05
 7.13 Term - 123970 123659  312  1  0   -3   48   333 0.563  15.20
 7.12 Intr - 138122 138026   97  1  1   74   76    37 0.071   1.11
 7.11 Intr - 149800 149698  103  2  1   90   25    65 0.029  -0.37
 7.10 Intr - 154691 154674   18  0  0   91   94    29 0.381   0.38
 7.09 Intr - 155442 155333  110  2  2  139   76   165 0.938  20.33
 7.08 Intr - 156922 156790  133  2  1  134   86   268 0.999  30.90
 7.07 Intr - 157699 157661   39  2  0   99   75    23 0.550   0.30
 7.06 Intr - 158699 158632   68  1  2   50   89   114 0.332   6.25
 7.05 Intr - 163852 163755   98  1  2   92   63   102 0.325   6.91
 7.04 Intr - 169456 169407   50  2  2  112   92    11 0.821   2.30
 7.03 Intr - 170953 170798  156  2  0  -18   68   144 0.411   1.78
 7.02 Intr - 173530 173393  138  2  0  -19  -75   458 0.433  19.24
 7.01 Init - 173641 173584   58  1  1   24   70    46 0.554  -2.13
 7.00 Prom - 176289 176250   40                              -4.86

 8.00 Prom + 184289 184328   40                              -4.26
 8.01 Sngl + 184452 184877  426  2  0   63   42   217 0.774  10.89
 8.02 PlyA + 186439 186444    6                               1.05

 9.02 PlyA - 186671 186666    6                               1.05
 9.01 Sngl - 188560 188156  405  1  0   81   51   154 0.676   7.30
 9.00 Prom - 193694 193655   40                              -3.96

10.00 Prom + 196229 196268   40                              -6.06
10.01 Init + 202859 202890   32  1  2  111  105    77 0.998  10.99
10.02 Intr + 205732 205816   85  1  1   67   41   157 0.997   8.72
10.03 Intr + 206606 206759  154  1  1  124   96   321 0.999  36.15
10.04 Intr + 209079 209149   71  1  2   75   76   176 0.714  14.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_1|347_aa
MVVIRMITIPVIITSTISAATTFIITTCITIIIITITTTFMITTTCTMAIITTTTISITT
TTIIITTITATFRITATCIMAIITTTITTITTTTITVTTITTTITTTTITVTTTTTTIIT
TTITIINTTTITTITTTFMITATCIMAIITTAITIITTTIITIITITTTITATITTTIIT
IITTTTITTITITTFITTIFITSLLPPSIITTFMITATCIMVTITTTTISTTFMITTTCI
MAIITTTITTTNTTIIITTITTIFMITATTTTITTTTITITTTITITTTTTTTFITTIFI
TTVIVTINHHHLHDYCHLHHGYNYYHHHHHHYHHHHHHHHHHHQQHI

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_1|1044_bp
atggtagttattcggatgataacaatccctgttatcatcacaagcaccatctctgctgcc
accaccttcatcatcaccacctgcatcacaatcattatcatcaccatcaccaccaccttc
atgatcaccaccacctgcaccatggctataattactaccaccaccatcagcatcactacc
accaccatcattatcaccaccatcaccgccaccttcaggatcactgccacctgcatcatg
gctataattaccaccaccatcaccaccatcactaccaccaccatcaccgtcaccaccatt
accaccaccatcactaccaccaccatcactgtcaccaccactaccaccaccatcatcacc
accaccatcaccatcatcaacaccaccaccatcaccaccatcaccaccaccttcatgatc
actgccacctgcatcatggctataattaccaccgccatcaccatcatcactaccaccatc
atcaccatcatcaccattaccaccaccatcactgccaccatcactaccaccatcatcacc
atcatcaccaccaccaccatcaccaccatcaccatcaccactttcatcaccaccatcttt
atcacatcattattaccaccatcaatcatcaccaccttcatgatcactgccacctgcatc
atggttacaattactaccaccaccatcagcaccaccttcatgatcaccaccacctgcatc
atggctataattactaccaccatcaccaccactaacaccaccatcattatcaccaccatc
accaccatcttcatgatcactgccaccaccaccaccatcaccactaccaccatcaccatc
accactaccatcaccatcaccaccaccactaccaccactttcatcaccaccatctttatc
acaaccgttattgtcaccatcaatcaccaccaccttcatgattactgccacctgcatcat
ggttacaattactaccaccaccatcaccatcactatcaccaccaccaccatcaccatcat
caccaccaccagcagcacatctga

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_2|222_aa
MAGVEEDLQTSTPTEAGKRPRTVERSSHVSHEPKMWIFMGKFSICRTFEGQAQLACQSPF
ATASVINNKHTTGNDSTRHLSSAHCVPAPRTAPGNGSNLVNFVEEIDEGTHDLEEDTGME
TSNIKDIRCWDLEEADPRLNSLRAQIESFNSILESHTVPGKYSGTVVGKEQPSPFSSSSK
LLNKRAMAEPSVEHCITSQAIMTWKRFGTIERDTSCSKRTRM

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_2|669_bp
atggcaggcgtagaggaggatttgcaaacttcgacgcctacagaggccgggaaacggcca
cgcacggtggagcggagcagccatgtaagccacgaaccaaaaatgtggatttttatggga
aagttttcaatttgtagaacatttgagggccaagcacaactcgcttgccaatcacccttt
gcaactgctagcgtcataaataataaacacaccactggtaatgacagcacccgacatttg
tcaagtgctcactgtgtgccggcacctcggacagcacctggcaatggtagtaacttggta
aattttgttgaagaaatagatgagggaactcatgatctagaggaagacacaggaatggaa
acaagcaacataaaagatattagatgctgggatctggaggaagcagaccccagactgaat
tccttgagggcacagattgagtctttcaactctatcctagagtcccacacagtacctggc
aaatactcgggaacagttgttggaaaagagcaaccatcacccttttcctcctcaagcaag
ttgctgaataagagagccatggctgagccgagcgtggagcactgtatcacctcgcaggcc
atcatgacttggaaaagatttgggaccattgagagagacacttcttgctcaaagagaaca
aggatgtag

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_3|77_aa
MRKKRKKRKKEEEEEEEEEEEEEEKEEGEEEGGGGGGEEEEEKEEEANLDVKEGRRNERK
PTLIECILCVRHFTSTI

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_3|234_bp
atgaggaagaagaggaagaagaggaagaaagaagaagaagaagaagaagaagaagaagaa
gaagaggaagaaaaagaagaaggagaagaagaaggaggaggaggaggaggagaggaggag
gaggagaaggaggaggaggccaatttggatgtaaaagaggggaggagaaatgagagaaaa
cccacacttattgagtgcatactatgtgtcaggcacttcacgtctacaatttaa

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_4|74_aa
MLMVPDLGRGRGPSQEGLDSPSSPTGVMKYEDRYRSEHLLRARPFNDRLDEIPAGSLCRE
AAGPISKSAGFEAK

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_4|225_bp
atgctcatggtgcctgacctggggaggggcaggggccccagccaggaagggctggactcg
ccatcctccccaactggtgttatgaagtatgaagatcgttatcgttctgagcacctacta
cgtgcccggccctttaacgatagacttgatgaaatccctgctggctccctgtgcagagaa
gcagcaggacccatcagcaagagtgcaggctttgaggccaaatag

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_5|145_aa
MQDGPGTSPYRVAKAVQRPKESPASASPEPPGSVSPAPCMTGRLGHITPQFATPDCTAPL
ASQAGQHLQDSGQGSGTQQRWRRRPSARQCGELRALGQTVAPAQTRARLWGLAGCWSGGL
DEIPAGSMCREATGPISKSAGFEAK

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_5|438_bp
atgcaagacgggcccggcaccagcccctaccgggttgcaaaagcagtgcaaaggcccaaa
gaaagtcctgcctcagcttcaccagagcccccaggatccgtgtcccctgcaccctgcatg
actggacgcctgggtcatatcacaccacagtttgccacacctgactgcacggcgcccctg
gccagccaagctggtcaacacctccaggacagcggccaaggcagtggaacccagcagagg
tggaggagaaggccatctgctcggcagtgcggcgagctcagggcactggggcagacagtg
gcacccgcccagacacgtgctcgcctctggggcctggccggctgctggtcaggaggactt
gatgaaatccctgctggctccatgtgcagagaagcaacaggacccatcagcaagagtgca
ggctttgaggccaaatag

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_6|256_aa
MSLCRSHQEALWKQIVGSTSSVQLASPGPEAHPLASLAAALVLWVRLAGVLVTMVKLAAK
CILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVWESPNVLCL
VYDVTNEESFNNCSKWLEKARSQAPGISLPEHKGIAEVAVGGEGALGLDFDGLRRTLALP
LSSHANLGVLVGNKTDLAGRRAVDSAEARAWALGQGLECFETSVKEMENFEAPFHCLAKQ
FHQLYREKVEVFRALA

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_6|771_bp
atgagcttgtgtcggagtcaccaggaggccttatggaagcagattgtgggctccacctcc
agtgttcagctggccagcccagggcccgaagcccacccactcgcgtctctagcagccgct
cttgtcctctgggtacggctcgcgggagtgttggttaccatggtgaagctggcagccaaa
tgcatcctggcaggagacccagcagtgggcaagaccgccctggcacagatcttccgcagt
gatggagcccatttccagaaaagctacaccctgacaacaggaatggatttggtggtgaag
acagtgccagttcctgacacgggagacagtgtgtgggagagtcccaatgtcttatgtctc
gtctatgatgtgaccaatgaagaatccttcaacaactgcagcaagtggctggagaaggct
cggtcacaggctccaggcatctctctcccagagcacaagggcattgcagaggtagctgtg
ggtggagaaggggccctgggcttggactttgatggcctaaggcgtacactggccctgcca
cttagcagccatgccaacctcggtgttttagttgggaacaagacagacctggccggcaga
cgagcagtggactcagctgaggcccgggcatgggcgctgggccagggcctggaatgtttt
gaaacatccgtgaaagagatggaaaacttcgaagcccctttccactgccttgccaagcag
ttccaccagctgtaccgggagaaggtggaggttttccgggccctggcatga

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_7|459_aa
MSCAGSWEYSDAYDTLVTLKEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKKKKNHINK
KKKNHCQCGTEINAVSFPPCCERAPELDKLIVMLGEDSSMDNCSTAMITVNTGQYESDMS
CHPLRAQKSDPQAWDLDLKVCSIAGTAILPPSGVNQFERVAQGIAENCRMSMTDLLNAED
IKKAVGAFSGVLKQDPKIQKIAATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGF
IEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDGFNVSTEKIRMPRVHTC
LHAVLVTFFLKPIPGDGSTALCFKAIALRLDRAGCQICISLLLAGHFAYTICYGPKAAAN
KSKGGSPSALLQQTISRLLLPPADRIRTSRPPCPAEATAQASTLHSGRTEGESVPFPLPF
IEMATAKYCISGDINNRAHVNSGKKNSKGHYREKAVHQM

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_7|1380_bp
atgtcctgtgctggatcctgggagtacagcgatgcatatgacacacttgtcaccctcaaa
gaagaagaagaagaagaagaagaagaagaagaagaggaagaagaagaagagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaatcatattaacaag
aagaagaagaatcattgtcaatgtggcaccgaaatcaacgcagtttcctttccaccctgc
tgcgaaagggcccctgagctcgacaagctcatagtcatgttgggagaagacagttccatg
gataattgctccacagcaatgatcacagtaaacacaggtcaatatgagagtgacatgtcc
tgccatcctttgagggcccagaagtcagatccacaggcctgggacttggacctgaaagtt
tgtagcattgcagggacagccatcttgccaccctcaggggtcaaccagtttgagagagtg
gcacaaggtattgctgagaattgcaggatgtcgatgacagacttgctgaacgctgaggac
atcaagaaggcggtgggagcctttagcggtgttctaaaacaggaccccaagatacagaaa
attgcagctaccgactccttcgaccacaaaaagttcttccaaatggtcggcctgaagaaa
aagagtgcggatgatgtgaagaaggtgtttcacatgctggacaaggacaaaagtggcttc
atcgaggaggatgagctgggattcatcctaaaaggcttctccccagatgccagagacctg
tctgctaaagaaaccaagatgctgatggctgctggagacaaagatggggacggcaaaatt
ggggttgacggcttcaatgtcagcacagagaagatccgcatgccccgtgtgcacacgtgc
ctgcacgcagtcctagttacattcttcctgaaacccattcccggcgatggatccactgcc
ctctgctttaaggctatagctctgcggctggacagagctggatgccaaatctgcatctcc
ctccttcttgctggacactttgcatataccatctgctatggtccgaaggcggcagcaaat
aagtcaaaaggcggcagcccttctgccctcctgcagcagacaatttcccggctgctgctg
ccccctgctgacagaatcaggacatcgcggcctccgtgccccgccgaggccacagctcag
gcctccactttgcattccgggcgcacagaaggtgagtcagttccatttcctctgcccttt
attgagatggccaccgccaagtactgcatcagcggagacataaacaaccgggcccacgtg
aacagtggaaaaaagaacagcaaaggtcattaccgagagaaggcagtgcaccagatgtga

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_8|141_aa
MEYKEINVVFMPANTTILQPMNQGVISTFKSYYLRNTFYKATASINSDSSDGGGQNKLKT
FWKRLIVLNATQHIFDSWEEVTISTLSGVWKKLIPTLIDDFEEFKTSVEEGTADVVEIAR
ELELEVESEDMTALLQSHDQT

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_8|426_bp
atggagtacaaggagattaatgtcgttttcatgcctgctaacacaaccattctgcagccc
atgaatcaaggagtaatttcaactttcaagtcttattatttaagaaacacattttataag
gctacagcttccataaacagtgattcctctgatggaggtggacaaaataaattgaaaacc
ttctggaaacgactcattgttctaaatgccactcaacatatttttgattcatgggaggag
gtcacaatatcaacattatcaggagtttggaagaagttgattccaaccctcatagacgac
tttgaggagttcaagacttcagtggaagaaggaactgcagatgtggtagaaatagcaaga
gaactagaattagaagtagagtctgaagatatgactgcattgctgcaatctcatgatcaa
acctga

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_9|134_aa
MDTALDQTIILTMTPGKNHGMNCHGCSSGLQSIRFSASHTSQGLRSPGWLPGTVLGPGDS
DTKQVQHKVRQGSETQELVRLAQDEAGGEKQERRGQEISSGQTKEGLISQAMEFELYQAG
QERCGKDLNRGDTG

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_9|405_bp
atggacactgctctggatcagacaatcattttgactatgacccctggaaaaaatcatggc
atgaactgccacggatgcagcagtggcttacagagcattcgcttctcggcatcacacacc
agccaaggtttacggagccccggatggttgccaggcacagtgctaggccctggggattca
gacacaaagcaggtacagcacaaagtcaggcaaggctcagagacccaggagctggttcgt
ttggctcaagatgaagcaggaggggagaaacaggagaggagaggccaggagatcagcagc
ggacagaccaaggagggccttataagtcaagccatggaatttgaactttatcaggcaggc
caggagaggtgtgggaaggatctgaacagaggagatactgggtga

>gi568815576r:36658314_36867865|GENSCAN_predicted_peptide_10|114_aa
MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYR
QFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMK

>gi568815576r:36658314_36867865|GENSCAN_predicted_CDS_10|342_bp
atggctgtggcccagcagctgcgggccgagagtgactttgaacagcttccggatgatgtt
gccatctcggccaacattgctgacatcgaggagaagagaggcttcaccagccactttgtt
ttcgtcatcgaggtgaagacaaaaggaggatccaagtacctcatctaccgccgctaccgc
cagttccatgctttgcagagcaagctggaggagcgcttcgggccagacagcaagagcagt
gccctggcctgtaccctgcccacactcccagccaaagtctacgtgggtgtgaaacaggag
atcgccgagatgcggatacctgccctcaacgcctacatgaag