GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:56:11

Sequence gi568815586r:88405199_88645865 : 240667 bp : 36.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  22355  22529  175  2  1   25   44   182 0.051   6.52
 1.02 Intr +  48905  49044  140  1  2    4   77   178 0.779   6.64
 1.03 Term +  51369  51513  145  0  1   84   54    56 0.437  -1.80
 1.04 PlyA +  52002  52007    6                               1.05

 2.13 PlyA -  52704  52699    6                               1.05
 2.12 Term -  61085  60762  324  2  0   37   54   342 0.472  19.48
 2.11 Intr -  75744  75577  168  0  0  100   20   108 0.039   4.42
 2.10 Intr -  84325  84227   99  1  0   48   93    70 0.218   2.89
 2.09 Intr -  85111  85027   85  0  1  102   16    80 0.121   1.10
 2.08 Intr - 101180 100996  185  2  2  101   81    35 0.247   1.76
 2.07 Intr - 101939 101830  110  0  2   66  115    44 0.626   3.98
 2.06 Intr - 110419 110336   84  2  0   82   92    58 0.947   4.47
 2.05 Intr - 111292 111136  157  1  1   97  116    55 0.957   7.86
 2.04 Intr - 113669 113499  171  2  0   89   88    90 0.113   8.32
 2.03 Intr - 127305 127243   63  0  0   86   76    57 0.171   2.30
 2.02 Intr - 140667 140554  114  0  0   70  111    66 0.443   6.82
 2.01 Init - 142173 142168    6  0  0   78   79     4 0.454  -0.71
 2.00 Prom - 142413 142374   40                              -5.65

 3.00 Prom + 147681 147720   40                              -6.65
 3.01 Init + 151697 151862  166  1  1   67   70   111 0.513   7.05
 3.02 Intr + 163952 164068  117  0  0  101   65    47 0.193   3.22
 3.03 Intr + 175239 175412  174  1  0  114   51    31 0.002   0.99
 3.04 Intr + 199852 200149  298  2  1   12   83   270 0.199  13.91
 3.05 Term + 201810 202320  511  0  1   31   48   186 0.466   1.76
 3.06 PlyA + 202401 202406    6                               1.05

 4.04 PlyA - 204920 204915    6                               1.05
 4.03 Term - 210862 210777   86  2  2  119   43    89 0.740   4.34
 4.02 Intr - 215001 214877  125  2  2  104   25   167 0.354  11.31
 4.01 Intr - 240038 239930  109  0  1   53  106    97 0.746   6.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  75744  75496  249  0  0  100   47   162 0.882   8.02
S.002 Init - 113645 113499  147  2  0   69   88   121 0.886  10.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:88405199_88645865|GENSCAN_predicted_peptide_1|153_aa
XTCKKEILQICGGTTQQKGAGEQLLELAKAQEKLVFPTASVENVAIHSTSGNQKCIALMA
LCKLEIHDAGSVAQSKSECPGTSNAVTQFEAKDPRTRVWRSTEVQRSKIKVLAGLCFSLE
TLGQNPLLLIRSVSRIQSCSSMTEVMVFFLAVS

>gi568815586r:88405199_88645865|GENSCAN_predicted_CDS_1|462_bp
nncacatgtaagaaggaaattcttcaaatttgtggaggcaccacccaacaaaaaggagca
ggggaacaactcttggaacttgcaaaggcccaggaaaagcttgtcttcccaacagccagt
gtggaaaatgtcgcaattcacagcacatcaggaaatcagaagtgtattgccttaatggcc
ctctgcaagctggagatccacgatgctggtagcgtggctcagtccaagtctgaatgccct
ggaacaagcaatgctgtaactcagtttgaggccaaagacccaagaacccgagtatggaga
agcactgaagtccaaaggtccaaaatcaaggtgttggcagggctgtgtttctctcttgag
accctaggacagaatcctctcttacttattcggagtgttagcagaattcagtcttgcagt
tctatgactgaagtaatggttttcttcctggctgtcagctga

>gi568815586r:88405199_88645865|GENSCAN_predicted_peptide_2|521_aa
MVTWILTCIYLQLLLFNPLVKTEGICRNRVTNNVKDVTKLVANLPKDYMITLKYVPGMDV
LPSHCWISEMVVQLSDSLTDLLDKFSNISEGLSNYSIIDKLVNIVDDLVECVKENSSKDL
KKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFVVASETSDCVVSSTLSPEKDSRVSVTKPF
MLPPVAASSLRNDSSSSNRKAKNPPGDSSLHWAAMALPALFSLIIGFAFGALYWKKRQPS
LTRAVENIQINEEDNEIRYFVLLNVCPIKHDIAISHTVYLPIMSLRSPSLMTVAPNQKLA
FNTILTDRSHGLPTHLAVAINCNPFRLLFISGCSRVGMAFSNTPTDHGNSSPGHHDPKTE
EPLPMTTTTKGPREVLPGYCQCSFKSQGLLSQLVVNAARPETHLSGSWGPLWPRERSSSP
ATEQSWTKNDFDGLREEGFRQSNYSELQEEIQTKGNEVKNFEKNLDEYVTRITNTEKCLR
ELMELKAKARELHEECRSLRSRCDQLEERVSVMEDETNEMK

>gi568815586r:88405199_88645865|GENSCAN_predicted_CDS_2|1566_bp
atggtgacttggattctcacttgcatttatcttcagctgctcctatttaatcctctcgtc
aaaactgaagggatctgcaggaatcgtgtgactaataatgtaaaagacgtcactaaattg
gtggcaaatcttccaaaagactacatgataaccctcaaatatgtccccgggatggatgtt
ttgccaagtcattgttggataagcgagatggtagtacaattgtcagacagcttgactgat
cttctggacaagttttcaaatatttctgaaggcttgagtaattattccatcatagacaaa
cttgtgaatatagtggatgaccttgtggagtgcgtgaaagaaaactcatctaaggatcta
aaaaaatcattcaagagcccagaacccaggctctttactcctgaagaattctttagaatt
tttaatagatccattgatgccttcaaggactttgtagtggcatctgaaactagtgattgt
gtggtttcttcaacattaagtcctgagaaagattccagagtcagtgtcacaaaaccattt
atgttaccccctgttgcagccagctcccttaggaatgacagcagtagcagtaataggaag
gccaaaaatccccctggagactccagcctacactgggcagccatggcattgccagcattg
ttttctcttataattggctttgcttttggagccttatactggaagaagagacagccaagt
cttacaagggcagttgaaaatatacaaattaatgaagaggataatgagataaggtatttt
gttttgctaaatgtgtgcccaatcaagcatgacattgccatttcacacactgtgtacctg
cccataatgtctttaagaagtccttcactcatgacagtagctcctaaccagaaacttgcc
ttcaacactattctaaccgatcggtctcatggtcttcctacacaccttgctgttgccatt
aactgcaacccattccgacttctatttatcagtggctgttctcgtgtgggaatggctttc
agcaacactcctactgatcatggcaacagctcaccagggcatcatgacccaaagacagag
gagcctcttcccatgaccaccaccaccaaaggcccaagggaagtactgccaggctactgt
cagtgttcatttaagtcccaagggctcctcagtcagcttgtggtgaatgctgccaggcct
gagactcacctttcagggtcatggggtcccctatggcccagagaacgcagttcctcacca
gcaacggaacaaagctggacgaagaatgactttgacgggttgagagaagaaggcttcaga
caatcaaattactctgagctacaggaggaaattcaaaccaaaggcaacgaagttaaaaac
tttgaaaaaaatttagacgaatatgtaactagaataaccaacacagagaagtgcttaagg
gagctgatggagctgaaagccaaggctcgagaactgcatgaagaatgtagaagcctcagg
agccgatgcgatcaactggaagaaagggtatcagtgatggaagatgaaacgaatgaaatg
aagtga

>gi568815586r:88405199_88645865|GENSCAN_predicted_peptide_3|421_aa
MMFTKEYLMELTLMRAVAIELMELKVNHSGWTTGVNEYEGISRVYYYSLPKKKEESKAKS
LGMRALNPNLFHKPATTYWCRDLGHMIERSNFALALLVSARGGERSPAAEPPALLYSSRP
PAPDTPPSLPEPGVGEKQARARREESGGRPEHGVDRHLVQESSSWYLVDAAVGRSFQRKK
QAAIITDLQPLLVIPRQTGSGVALQQNPADQQQRGLTVRGKTNKQKGIASTSTTRTSTQN
PHLNVTNGKEQRTLHPKSTEYTFFSAPHNTYSKTDHIIGCKTLLSKRKRTEIITNSLSDQ
SVIKLEIRIKNLPQNCPTTWKLNNLLLNDDWVNNEIKAEINKFIENNENKDTACWNLWDT
PEAMFRGKFVALNAHRGKQETSKIDTLTSQLKELEEQEQTNSKTRRQEIIKIRAELKEIE
T

>gi568815586r:88405199_88645865|GENSCAN_predicted_CDS_3|1266_bp
atgatgtttactaaagagtacttaatggagctgaccttaatgagggcagttgccattgag
ttgatggaactaaaagtcaatcacagtggatggactacaggagtgaatgagtatgaggga
atttcaagggtatattactacagtttgccaaaaaagaaagaagagagtaaagcaaagagc
ttgggaatgcgagctctgaatccgaatctgtttcataagccagccaccacatattggtgc
cgcgatcttgggcacatgatagaaagaagtaactttgctctagcgcttctagtctcggcg
cgaggcggcgagcgaagcccggctgctgagccgccggcgcttttatacagttcccgcccg
cctgctccggacacgcctccttcccttccggagcccggggtaggcgagaagcaggcaagg
gcgcggagggaagaatcgggagggcggccagagcacggggttgacagacacctcgtacag
gagagctccagctggtacttggtggatgctgctgtgggacgaagtttccagaggaagaaa
caggcagcaattattactgatctgcagcctctgctggtgatacccaggcaaacagggtct
ggagtggcccttcagcaaaatccagcagaccagcagcagaggggcctgactgttagaggg
aaaactaataaacagaaaggaatagcatcaacatcaacaacaaggacgtccacacaaaat
ccccatctgaacgtcaccaatggcaaagaacaaagaaccctccaccccaaatcaacagaa
tatacattcttctcagcaccacataacacttattctaaaactgaccacataattggatgt
aaaacactcctcagcaaacgtaaaagaacagaaatcataacaaacagtctctcagaccaa
agtgtaatcaaattagaaatcaggattaagaacctccctcaaaactgcccaactacatgg
aaactgaacaacctgctcctgaatgacgactgggtaaataacgaaattaaggcagaaata
aataagttcattgaaaacaatgagaacaaggacacagcatgctggaatctctgggacaca
cctgaagccatgtttagagggaaatttgtagcactaaatgcccacaggggaaagcaggaa
acatctaaaatcgataccctgacatcacaattaaaagaactagaggagcaggagcaaaca
aattcaaaaactagaagacaagaaataattaagatcagagcagaattgaaggagatagag
acatga

>gi568815586r:88405199_88645865|GENSCAN_predicted_peptide_4|106_aa
XSPWVTLGSGIVKKKSTPIDKTNRKVGNETCDSEQCGESCLGEWDLGICTATEFPVIRAT
LGKWKGHLAAEEGIDFAPGAGLGMKLQIKEKKQAPDNDPETQHITQ

>gi568815586r:88405199_88645865|GENSCAN_predicted_CDS_4|321_bp
ngcagtccctgggttacactgggtagtggaattgtaaagaagaaatccactcctatagac
aaaaccaatcggaaggtaggaaatgaaacctgtgactcagagcaatgtggagaatcctgt
ttgggagagtgggacctgggaatctgtactgctactgagttcccagtgattcgagcaaca
ctggggaagtggaaagggcatctggctgctgaagagggcatcgattttgctcccggtgca
ggtttgggaatgaagcttcagatcaaagagaagaagcaagcccctgacaatgatccagaa
acccagcatatcactcagtag