GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:50:54

Sequence gi568815584f:49793737_49994261 : 200525 bp : 42.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.19 Intr -   2208   2055  154  2  1   66   92   145 0.881  11.85
 1.18 Intr -   6960   6684  277  1  1   70   86   368 0.967  30.45
 1.17 Intr -   8837   8717  121  2  1   56   36   104 0.593   1.15
 1.16 Intr -  12397  12285  113  2  2   49   90    55 0.366   0.98
 1.15 Intr -  18935  18813  123  0  0   22   43   115 0.015   0.04
 1.14 Intr -  21121  21018  104  0  2   66   96    35 0.020   1.00
 1.13 Intr -  32219  32131   89  2  2   52  111    35 0.075   0.05
 1.12 Intr -  34618  34555   64  0  1   72   79    74 0.617   2.70
 1.11 Intr -  35071  34880  192  0  0   20  106   243 0.975  16.99
 1.10 Intr -  35526  35318  209  0  2   59  115   134 0.989  10.15
 1.09 Intr -  39760  39687   74  2  2   68   64    54 0.877  -0.79
 1.08 Intr -  40713  40627   87  1  0   49   95    85 0.594   4.32
 1.07 Intr -  44470  44403   68  0  2   70   69    48 0.802  -1.27
 1.06 Intr -  47130  46982  149  0  2   71   98   189 0.981  16.31
 1.05 Intr -  50723  50661   63  2  0   62   83    57 0.571   0.60
 1.04 Intr -  52529  52404  126  2  0   93  110   114 0.999  14.06
 1.03 Intr -  57929  57827  103  1  1   89   92   115 0.999  11.26
 1.02 Intr -  58139  58071   69  1  0   95   69    67 0.268   2.88
 1.01 Init -  59017  58959   59  1  2   91   60    94 0.275   8.00
 1.00 Prom -  62412  62373   40                              -2.75

 2.04 PlyA -  65244  65239    6                               1.05
 2.03 Term -  68580  68307  274  2  1   80   43   260 0.961  14.66
 2.02 Intr -  74249  74151   99  1  0  134   85    -4 0.279   2.21
 2.01 Init -  83338  83310   29  1  2   69  106    21 0.182   1.12
 2.00 Prom -  85092  85053   40                              -7.45

 3.00 Prom +  93352  93391   40                              -6.65
 3.01 Init + 100001 100446  446  1  2   94   84   752 0.694  70.93
 3.02 Term + 117156 117288  133  0  1   50   48   129 0.693   1.68
 3.03 PlyA + 117455 117460    6                               1.05

 4.00 Prom + 117782 117821   40                              -6.55
 4.01 Init + 142993 143340  348  0  0   49   57   217 0.068  11.93
 4.02 Intr + 149759 149960  202  1  1   46   71    79 0.021  -0.06
 4.03 Intr + 158744 158882  139  0  1   87   45   100 0.035   4.20
 4.04 Intr + 164180 164234   55  2  1   77   94    -3 0.014  -2.74
 4.05 Intr + 170117 170335  219  1  0  101   69   167 0.176  13.68
 4.06 Intr + 172653 172685   33  2  0   87   80    39 0.013   0.50
 4.07 Intr + 185864 185945   82  1  1   63   78    81 0.052   2.89
 4.08 Term + 186671 186942  272  0  2   81   43   119 0.335   1.36
 4.09 PlyA + 187500 187505    6                               1.05

 5.06 PlyA - 187960 187955    6                               1.05
 5.05 Term - 188568 188469  100  2  1  119   55   113 0.505   7.72
 5.04 Intr - 194850 194617  234  2  0   91   52   117 0.452   4.28
 5.03 Intr - 196597 196398  200  1  2   93   62    98 0.563   4.93
 5.02 Intr - 198028 197900  129  1  0   29   12   146 0.388   1.07
 5.01 Intr - 199137 199042   96  0  0   99   95    73 0.258   8.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:49793737_49994261|GENSCAN_predicted_peptide_1|748_aa
MKSRFSTIDLRAVLAELNASLLGMRVNNVYDVDNKTYLIRLQKPDFKATLLLESGIRIHT
TEFEWPKNMMPSSFAMKCRKHLKSRRLVSAKQLGVDRIVDFQFGSDEAAYHLIIELYDRG
SSTPVPQTGTGLWNQATRQEGNIVLTDYEYVILNILRFRTDEADDVKFAVRERYPLDHAR
AAEPLLTLERLTEIVASAPKGELLKRVLNPLLPYGPALIEHCLLENGFSGNVKVDEKLET
KDIEKVLVSLQKAEDYMKTTSNFSGKEIDKLKGELIEMNLQIVDRAIQVVRSALANQIDW
TEIGLIVKEAQAQGDPVASAIKELKLQTNHVTMLLRNPYLLSEEEDDDVDGDVNVEKNET
EPPKGKKKKQKNKQLQKPQKNKPLLVDVDLSLSAYANAKKYYDHKRYAAKKTQKTVEAAE
KAFKSAEKKTKQTLKEVQTVTSIQKARKVYWFEKFLWFISSENYLIIGGRDQQQNEIIVK
RYLTPVINKQWNKEEITKDATKHFEMNEMKIQCVKTYEMQEEQPLGGEPIPPRTLTEAGT
MALCYSAAWDARVITSAWWVYHHQVDESCVWRHQGERKVRVQDEDMETLASCTSELISEE
MEQLDGGDTSSDEDKEEHETPVEVELMTQVDQEDITLQSGRDELNEELIQEESSEDEGEY
EEVRKDQDSVGEMKDEGEETLNYPDTTIDLSHLQPQREMKKKKLPSDSGDLEALEGKDKE
KESTVHIETHQNTSKNVAAVQPMKRGQK

>gi568815584f:49793737_49994261|GENSCAN_predicted_CDS_1|2244_bp
atgaagagccgctttagcaccattgacctccgcgccgtactcgcggagctgaatgctagc
ttgctaggaatgagagtaaacaatgtttatgatgtggataataagacataccttattcgt
cttcaaaaaccggactttaaagctacacttttacttgaatctggcatacgaattcataca
acagaatttgagtggcctaagaatatgatgccgtctagttttgccatgaagtgccgaaaa
catttgaagagtcggagattagtcagtgcaaaacagcttggtgtggatagaattgtagat
tttcaatttggaagtgatgaagctgcttaccatttaatcattgagctctatgatagggga
tcttcaacccctgtgccgcagactggaactggtctgtggaaccaggccacacggcaggag
gggaacattgttcttacagattatgagtacgtaattttaaatattctaaggtttcgaact
gatgaggcagatgatgttaaatttgctgttcgtgaacgctatccacttgatcatgctaga
gctgctgaacctttgcttactttggaaaggttgactgaaatagtagccagcgcacctaag
ggtgaactactgaagagggtgcttaacccattacttccctatggaccagctctcattgaa
cactgtcttttagaaaatggattctcgggtaatgtcaaagtggatgaaaaacttgaaact
aaagatattgaaaaagtacttgtttctctgcagaaagcagaagactatatgaaaacaaca
tccaacttcagtgggaaggaaatagacaaactgaaaggagagctcatagaaatgaaccta
caaatagttgacagagccattcaggtagttcgaagtgctttagctaaccagatagattgg
acagaaattgggttaattgtgaaagaagcccaggctcaaggagaccctgttgcaagtgca
atcaaagaattaaaactacaaacaaaccatgttacaatgctgctaagaaatccatacttg
ttatcagaggaggaagatgatgatgttgatggtgacgtcaatgttgagaaaaatgaaact
gaaccaccaaaaggaaaaaagaaaaaacaaaagaataaacagctgcagaagcctcagaaa
aataagcccttacttgtagatgttgatctcagcttgtcagcatatgccaatgccaaaaag
tattatgatcacaagagatatgctgctaagaaaacacaaaagactgttgaagctgctgag
aaggcattcaagtcagcagaaaagaaaacaaagcaaacattaaaagaagttcagactgtt
acctctattcaaaaagcaagaaaagtatattggtttgagaaatttctgtggttcattagc
tcagagaactatctaattataggtggacgagatcagcaacagaatgaaataattgtgaaa
agatacttgacaccagttataaataagcaatggaacaaagaggaaatcacaaaagatgcc
acaaaacactttgagatgaacgaaatgaaaatacagtgtgtcaaaacttatgagatgcaa
gaagagcagcccttagggggagaacccatccccccacggaccttgactgaagctggcaca
atggcactttgctacagtgctgcttgggatgcacgagttatcactagtgcttggtgggtg
taccatcatcaggtagatgagtcttgtgtttggagacatcagggtgaacgaaaagtcaga
gtacaggatgaagacatggagacactggcaagttgtacaagtgaactcatatcagaagaa
atggaacaattagatggaggtgacacgagcagtgatgaggataaagaagaacatgaaact
cctgtggaagtagaactcatgactcaggttgaccaagaggatatcactcttcagagtggc
agagatgaactaaatgaggagctcattcaggaagaaagctctgaagacgaaggagaatat
gaagaggttagaaaagatcaggattctgttggtgaaatgaaggatgaaggggaagagaca
ttaaattatcctgatactaccattgacttgtctcaccttcaaccccaaagggaaatgaaa
aagaaaaaacttccaagtgactcaggagatttagaagcgttagagggaaaggataaagaa
aaagaaagtactgtacacattgaaactcatcagaacacaagcaaaaatgttgcggctgtg
cagccaatgaaacgaggacaaaag

>gi568815584f:49793737_49994261|GENSCAN_predicted_peptide_2|133_aa
MLLNNPWAKKCVGPPPRVFSHGPAIRACAAQVQPQLCLVPLPCAKAHQLTGCLGICNRLI
AAPYRRIFKTSLRKAVITFGANRGCSFTHRQSEKNGRRITESKKYVLLKNFQVLPAAVQD
AACSYQHYSPALS

>gi568815584f:49793737_49994261|GENSCAN_predicted_CDS_2|402_bp
atgcttctgaataatccatgggccaaaaagtgcgttgggccccctcctcgggtgttctct
cacggcccagcaatcagggcctgtgcggctcaagttcagcctcagctttgtctggtaccc
cttccctgcgcgaaagctcaccagttgacgggatgcttggggatttgcaaccgcctcatc
gctgccccctaccggcgcatattcaaaacgtctctgcgaaaagctgttattaccttcgga
gccaacaggggctgctcgtttacccacagacagtcggaaaaaaatggccgccggatcaca
gagagcaaaaagtacgttctcttaaagaatttccaagttcttcccgcggccgttcaggat
gctgcttgcagttaccaacattattcccctgcactgagctga

>gi568815584f:49793737_49994261|GENSCAN_predicted_peptide_3|192_aa
MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFN
VWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIF
ANKQDLPDAMKPHEIQEKLGLTRIRDRNCNKDAVGGHYPKRINTETENLMPHILTYKWEL
NTGYTQTQRWEQ

>gi568815584f:49793737_49994261|GENSCAN_predicted_CDS_3|579_bp
atggggaaggtgctatccaaaatcttcgggaacaaggaaatgcggatcctcatgttgggc
ctggacgcggccggcaagacaacaatcctgtacaagttgaagctgggccagtcggtgacc
accattcccactgtgggtttcaacgtggagacggtgacttacaaaaatgtcaagttcaac
gtatgggatgtgggcggccaggacaagatccggccgctctggcggcattactacactggg
acccaaggtctcatcttcgtagtggactgcgccgaccgcgaccgcatcgatgaggctcgc
caggagctgcaccgcattatcaatgaccgggagatgagggacgccataatcctcatcttc
gccaacaagcaggacctgcccgatgccatgaaaccccacgagatccaggagaaactgggc
ctgacccggattcgggacaggaactgcaacaaggatgcagttggaggccattatcctaag
cgaattaacacagaaacagaaaacctaatgccgcacattcttacttataagtgggagcta
aacactgggtacacacagacacaaagatgggaacagtag

>gi568815584f:49793737_49994261|GENSCAN_predicted_peptide_4|449_aa
MWKQLWNWVIGRGWYRLESSEADRKMWESLELPREMLNGFDKNADSDMNNKVQAEMVSDG
DEELVGNWSKGDSCYVLAKRLAAFCPCPRDLWNFELERDDLAYLMEEISKQQRIQKLSLG
DRVKTLSLKNNNNNNNNNNKKPKKTGRLHLSIKRYVTHYEVLYIRHDLLVRCISYHLGKS
QNEGTSREWCRTQAQPVRASFLDLEYQGKKQRVKNSSEDASGGSVICGQQRGNQGTERLR
NSSRITKLTKDLPRTLVVTDQALWLEELAQQRQLRSGEGWKPHTRAPLLLQGCQRSSHTQ
RLARPCVLSFLPAGTSGAGSVMLEEHDRGEVEDGFFANNRNMQRLLRAVLVGSEVGGCGA
LEHEPTQIAGQPFPSQDSSGNLLTALFWLPYLEHLMFLDVPSSSDNHPYDVPMATMLTLG
LPFWDGNPAQGPPSVLILSQVLIASQWDQ

>gi568815584f:49793737_49994261|GENSCAN_predicted_CDS_4|1350_bp
atgtggaagcaactttggaactgggtaataggcagaggttggtaccgtttggagagctca
gaagcagacaggaaaatgtgggaaagtttggaacttcctagagagatgttgaatggcttt
gacaaaaatgctgatagtgatatgaacaataaggtccaggccgagatggtctcagatgga
gatgaagaactggttgggaattggagcaaaggtgactcttgttatgttttagcaaagaga
ctggcagcattttgtccctgccctagagatttgtggaactttgaactcgagagagatgac
ttagcgtatctgatggaagaaatttctaaacagcaaaggattcaaaagcttagcctgggt
gacagagtgaagacactgtctcttaaaaacaacaacaacaacaacaacaacaacaacaaa
aaacccaaaaaaacaggacgtttgcatttgagcatcaagcgctatgtaacacattatgaa
gtcctatatattagacatgatttactagtcagatgtattagttaccacctagggaagagc
caaaatgaagggacctccagggaatggtgcaggactcaagctcagccagtcagagcctcc
tttctggaccttgaatatcaagggaagaagcagagggtgaaaaatagttcagaggacgct
agtggtggcagtgtcatctgtgggcagcaaaggggaaaccaaggcacagagagattaaga
aactcatccaggattacaaagctaactaaggacttgcccagaactctggtggttacagac
caagcactatggttggaggagctagcccaacagaggcagctgcgatcaggggaagggtgg
aagccgcacaccagagcacccttgctgctccagggctgtcaacgatcttctcatactcag
agactcgctcgcccctgtgtcctttcattccttcctgcaggcacttctggagcgggtagc
gtgatgctggaggagcatgacagaggagaggtggaggatgggttttttgccaataacagg
aacatgcagaggctgctcagagcagttttggttggtagtgaagttggaggatgtggagcc
cttgaacatgagccaactcagatagcagggcagccattcccttcccaggactcctctgga
aacctgctcactgctttgttttggttgccttatcttgagcatctgatgtttcttgatgta
ccttctagctctgataaccacccctatgatgtccccatggccaccatgcttactctggga
ttgcccttctgggatggtaaccctgcccaaggccctccttctgtccttattctgagccag
gtgttaatagccagccaatgggatcaataa

>gi568815584f:49793737_49994261|GENSCAN_predicted_peptide_5|252_aa
EKELCHEKWKTPEKLFQRQESSRQAGLGKILPPSCDHLARQPKNKAVTMETKKRQKDTGS
SLSRPAVHEALSEAHNFVFATWVHSSIVSFSLPSGINFLNLVDKALVAQGNKNYGWLATA
AEWGWSSPNHHEGQGIILPGDRAEAPLRAVEQHDSGSEETLDGPLRLGSLTSTSLMGNCT
VLGDIVLVVALRAFLCSFSPSIPQLDFLPAFHNSILHTGSKYLCTLTRHWLLVVTVLRAV
GNMKSNETRSLL

>gi568815584f:49793737_49994261|GENSCAN_predicted_CDS_5|759_bp
gagaaagaattgtgccatgaaaaatggaaaactcctgagaagctgttccagcgtcaggag
agcagcagacaagctggactggggaagattcttcctccatcttgtgatcatctggcaaga
cagcccaagaataaagccgtcaccatggagactaagaagagacagaaagacactgggtct
tcattgtctcgtccagctgttcatgaggccttatctgaagcccacaactttgtttttgca
acatgggtccactcttccatagttagtttctcacttccctctggcattaactttctcaat
ctagtggataaggcacttgtggcccagggtaacaagaactatggttggttggcaacagca
gctgagtggggctggtcttctccgaatcatcatgaaggacagggaattattttgcctgga
gacagggctgaagcacccctacgagcagttgaacagcatgactctggcagcgaagaaacc
ctggatgggcctctgaggctggggagcctgaccagtacctcactgatgggaaattgcact
gtccttggagacattgtccttgttgtcgccttaagagctttcctttgttctttctctccc
agtataccgcagcttgattttctccctgctttccacaatagcattctgcacacaggatcg
aaatacctctgtacactcaccagacactggctgctggttgtcacggtgctaagagctgtg
ggaaacatgaagagcaatgagaccaggtccctgctctga