Result of GENSCAN for pF1KB4054
GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:50:17

Sequence gi568815596f:111023746_111264228 : 240483 bp : 43.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    127    136   10  0  1   83   98     2 0.474   1.46
 1.02 Term +    624    784  161  1  2   44   34   136 0.511   1.90
 1.03 PlyA +   1527   1532    6                               1.05

 2.06 PlyA -   1841   1836    6                               1.05
 2.05 Term -   6870   6833   38  1  2  109   38    57 0.650   0.30
 2.04 Intr -   8039   7966   74  1  2  104  109    28 0.651   5.55
 2.03 Intr -  12441  12344   98  0  2  121   13    35 0.207  -1.89
 2.02 Intr -  22552  22429  124  0  1  119   73    31 0.289   5.29
 2.01 Init -  30933  30632  302  0  2   84   64   111 0.111   3.03
 2.00 Prom -  43655  43616   40                              -2.16

 3.00 Prom +  44668  44707   40                              -2.96
 3.01 Sngl +  57505  58017  513  0  0   58   38   195 0.652   7.54
 3.02 PlyA +  58193  58198    6                               1.05

 4.00 Prom +  58964  59003   40                              -2.56
 4.01 Init +  65769  65819   51  2  0   55  102     0 0.292  -0.74
 4.02 Intr +  69120  69221  102  2  0   59  110    39 0.491   3.57
 4.03 Term +  93871  94071  201  0  0  101   43   184 0.990  12.59
 4.04 PlyA +  94779  94784    6                               1.05

 5.05 PlyA -  96357  96352    6                              -0.45
 5.04 Term -  97841  97087  755  0  2  -28   42   538 0.752  31.21
 5.03 Intr -  98115  98024   92  2  2   60  101    34 0.989   1.54
 5.02 Intr -  99159  98207  953  0  2   81   53   699 0.924  55.61
 5.01 Init - 115740 115678   63  0  0   70  102    35 0.337   4.25
 5.00 Prom - 130364 130325   40                              -1.86

 6.11 PlyA - 130413 130408    6                               1.05
 6.10 Term - 159672 159278  395  1  2   72   45   206 0.389   9.90
 6.09 Intr - 164757 164624  134  2  2   26   61    69 0.024  -1.71
 6.08 Intr - 168414 168303  112  1  1   55   44   107 0.232   2.44
 6.07 Intr - 175244 175132  113  1  2   86   57    74 0.155   4.12
 6.06 Intr - 177040 176914  127  2  1   60   83    55 0.094   1.94
 6.05 Intr - 198991 198943   49  1  1   91   76    17 0.261  -0.95
 6.04 Intr - 201518 199445 2074  1  1   68   29  1815 0.698 160.94
 6.03 Intr - 209994 209937   58  1  1   60   81    83 0.733   2.74
 6.02 Intr - 224496 224403   94  0  1  125   67    68 0.673   7.94
 6.01 Init - 227838 227755   84  0  0   67   19   146 0.140   4.83
 6.00 Prom - 231183 231144   40                              -1.86

 7.02 PlyA - 231975 231970    6                               1.05
 7.01 Term - 239995 239790  206  2  2   83   38   143 0.714   6.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  99530  99480   51  2  0   67   86    37 0.811   1.18
S.002 Sngl + 181446 181640  195  2  0   54   47   203 0.828   7.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:111023746_111264228|GENSCAN_predicted_peptide_1|56_aa
MVEEEQRLMEEGFMLVEAAMGVKQLQAKECWRPLATTRSQKRKERTFRGGMELLTP

>gi568815596f:111023746_111264228|GENSCAN_predicted_CDS_1|171_bp
atggtggaagaagagcagagactcatggaagaaggctttatgctggtggaggcagcaatg
ggagtgaagcagctgcaagccaaggaatgttggagaccactggcaaccaccagaagccag
aagaggaaagaaagaaccttcagaggtggcatggaactgctgacaccttga

>gi568815596f:111023746_111264228|GENSCAN_predicted_peptide_2|211_aa
MVAGDVEGGLASLLPHAPRRLCAFGGSIHTWLVRNPKEASSSIQPPHLPSVEPSWGAVSA
GLLNLGCSSWQLYPPTLMGPCMSHWVDSSYEYCSTCLLRSSCVSLDKSHSLAEPRFLISD
VWSPEPTCWSRCEAVCKETVLAASTSSSNRKTLQKPNSQRMRSVVLQLLVLPQVGAVSPG
TRRPLSHSITNIQQEPTDLALRFLRGLEIHM

>gi568815596f:111023746_111264228|GENSCAN_predicted_CDS_2|636_bp
atggtggcaggggacgtggagggaggcctggcgtccctccttccacacgctcccaggcgt
ctctgtgcatttgggggcagcattcatacttggctggtaagaaatcctaaggaagcttcc
agcagcattcagcccccacacctcccatcagtggagccttcctggggagctgtctctgca
ggcttgctcaacctgggctgcagctcttggcagctgtacccaccgaccctgatgggcccc
tgcatgtcccactgggtagacagcagctatgaatactgttctacatgtctgcttagatca
agctgtgtgtccttagacaagtcacacagccttgctgagcctcgcttcctcatcagtgac
gtgtggagcccggagcccacttgctggagcaggtgtgaggctgtgtgtaaagaaacggtg
ctggcagcctccacctccagtagtaacagaaaaacactgcagaaacccaacagtcaaaga
atgagaagtgttgtcttacaacttctggttctaccccaagtcggagctgtgtctccaggg
acccgtagacccctgagtcactcaattacaaatattcaacaggagccaactgacctcgct
ctgcggtttctgcggggcctggagatccacatgtaa

>gi568815596f:111023746_111264228|GENSCAN_predicted_peptide_3|170_aa
MIVYLENPIVSAQNLLKRISNFSKVSGYKINVQKSQTFLYTNNIQTESQIMSELPFKIAT
KRIKYLGIQLTRDVKDIFKENYKLLLNEIREDTNKWKNIPCSWIGRINIMKMAILPEVIY
RFNAIPTKLPLTFFTELEKNYFKFHMEPKKSPYSQYNPKQKEQSWRHHTT

>gi568815596f:111023746_111264228|GENSCAN_predicted_CDS_3|513_bp
atgattgtatatttagaaaaccccatcgtctcagcccagaatctccttaagcgtataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaaacattcctatac
accaataacatacaaacagagagccaaatcatgagtgaactcccatttaaaattgctaca
aagagaataaaatatctaggaatacaacttacaagggatgtgaaggacatcttcaaggag
aactacaagctgctgctcaacgaaataagagaggacacaaacaaatggaaaaacattcca
tgctcctggataggaagaatcaatatcatgaaaatggccatactgcctgaagtaatttat
agattcaatgctatccccaccaagctaccattgactttcttcacagaattagaaaaaaac
tactttaaatttcatatggaaccaaaaaagagcccgtatagccaatacaatcctaagcaa
aaggaacaaagctggaggcatcacactacctga

>gi568815596f:111023746_111264228|GENSCAN_predicted_peptide_4|117_aa
MSGDLTKSHKELLGEFKFCLLYGTKLVFQERAWYLEHKYLTPMASTRIRNQLLDLCDSVK
DDARRVISTFNIPHTYLHAPIAGISNPRAAWAFYPAPLQPRPREEARSRRPKLGAKL

>gi568815596f:111023746_111264228|GENSCAN_predicted_CDS_4|354_bp
atgtcaggtgacttaaccaagagtcataaagaactccttggggagttcaagttttgtctg
ttgtatggaaccaagctggtgtttcaggagcgggcctggtatttagaacataaatacttg
actcccatggccagcacgaggatcaggaatcagttgctggatttgtgcgactcggtgaag
gatgatgcccggagggtgatctcgacctttaacattccacacacctacctccacgcacca
atcgccggaatctccaacccgcgggccgcgtgggctttctaccctgcaccgctgcagccg
cggccacgggaagaggcgcgctcccggcggcccaagctgggagccaagctctaa

>gi568815596f:111023746_111264228|GENSCAN_predicted_peptide_5|620_aa
MNTPNVKSTSNQCIPYFGKKYSAASGPGTKPRGVRPAPFADRAPPDRHHESSAGDKARDS
GSESPAQRKARAFPPARRRAPPGSRGLRTPRLWPALPRPQPPGTSSASSRSSPRALRPPP
PAPPTSPRRWRRVPAFPIGPRAVAPRRSQSAAAVGAAPTGQAAKGEAIVDKLASERCSGR
GRGGCRFVGGFEGRLARPPCPSLCSFRTQALAAPAVLDSQSPGDKAGLAPRPDPQGHPQA
QSSPLVLVLARRGQTLTAVTALAVATILLQQLPLSPGAPQTRVKAEEPPLAADAHVRDHR
VNSHPPPWRPSGPPPAAPTLGQQVPEGTAPPACTANRVGWSGEDLDFSLPGNRADGTGRR
TPAEQAGAPGRRSRRRDFPAGRTARYYEQVLSSRAGAERHALPLLLPGPTTLHQARAQHP
VPSRTSAKSLQVPRERLFFKENLPEREPDPHGSPPPAGDKRRRCKRLRSHVHGKRAVGGA
VRAPALVFLRCQARAPGFGGIYLAFLSPRVRVRHLGEQGPRKGAEAVAAGTQRTEYRDDA
IAVWQGSQGGCKNQVVVVAAAAAAAAAAAAAAAAAALDAELQQTADQAAARSEVKPARPC
SPALAGGPAPTPNHCGPRPR

>gi568815596f:111023746_111264228|GENSCAN_predicted_CDS_5|1863_bp
atgaacactcctaatgttaaatccacgagcaaccaatgtatcccttattttgggaaaaag
tacagcgcagcgtccgggccagggaccaagccccgcggcgtccggcccgcgcccttcgcc
gaccgggcgccccctgaccgtcaccacgaaagcagcgcaggagacaaagcccgggactcg
ggttcagagtccccggcgcagcgcaaagcccgcgccttcccgccagcccgccgccgcgct
ccgccgggcagccgagggctccgcacgccgcgcctctggcccgcgctgccccggccgcag
ccgccgggaacatcctccgcctcctcccgctcctcccctcgcgctctgcgcccgccgccg
ccggcaccgccgacctccccgcgccgctggcgccgggtgcccgcgttcccaattggtccg
cgcgcggtcgctccgcgccgcagccaatcggcagccgcggtgggggcggcgcctacgggt
caggccgccaaaggcgaggcgattgttgacaaactcgcctccgagcgctgctctggccgt
ggtcgtggcggctgccgcttcgtcggaggatttgagggccggctggcccggccaccctgc
ccatccctgtgctccttccggacacaagccttagcagctcccgccgtcctggacagccag
tcacctggagacaaagcaggacttgcgccgcgcccggacccgcagggccatccccaggcc
cagtcctcgccacttgtccttgttttggcccgtcgggggcagaccctaacggccgtcacc
gccctggctgtggcaactattctcctccaacaacttcctctctctcctggtgcgccgcag
acacgagtcaaagccgaagagccacccctggccgcggacgcgcacgtccgcgaccatcga
gtaaattcacaccctccgccctggcgtccgtcgggccctccaccagcagcgccaaccctg
gggcaacaggtcccagagggcacggcgccgccagcctgcaccgcgaaccgggtcgggtgg
tcaggggaggacctagatttctcgctgccagggaatcgtgcggatggcacaggccgcagg
actcctgcagagcaagcaggggccccagggcgccggagccggcggcgagactttccagct
gggcgcacagcccgatactacgagcaggtcctcagctcccgggccggcgccgaaaggcac
gcgctgcctctcctcctgcccggacctacgacccttcaccaggcccgcgcgcagcatccc
gtcccaagccgcacttcggccaagagcctgcaggttccgcgtgaacgacttttctttaaa
gagaacctgcccgagagggaacccgatccacacggatccccacctcccgccggcgacaag
cggcgccgatgcaagcgtctccgctcgcacgtgcacgggaagcgggcagtaggtggtgcc
gttcgggctccagcgctagtcttccttcggtgccaggcccgcgccccgggatttggaggt
atttaccttgcgtttctcagtccgagagtcagagtcagacatttgggggaacaagggcca
agaaagggcgccgaggcggtggcggcgggaacgcagcgaaccgaataccgcgatgatgcg
atcgcagtgtggcagggttcgcagggtggctgcaagaatcaagtggtggtagtggcggcg
gcggcggcggcggcggcggcggcggcggcggcggcagcggcagcggcgctggacgcagag
ctccaacaaactgcagaccaggcggctgcgcggagcgaagtgaaacctgcgcggccctgc
agcccagctctggctggcggccccgctcctacgcccaatcactgcggaccccgcccccgc
tag

>gi568815596f:111023746_111264228|GENSCAN_predicted_peptide_6|1079_aa
MVMVVVVMVMVEVVMVAVVVVMVVVAVMAGQKADPGRIAHVFGYTGEGIVPAPQHIFIQV
LDEPEDVYKWKKRSHWSRRCPEYAICKTELVLFPQNVSPGCPEYAICKTELVLFPQNVSP
GCPEYAICKTELVLFPPNVSSPRCPEYAICKTELVLFPPNVSPRCPEYAICKTELILFPQ
NVSPGCREYAICKTELVLFPPNVSPRCPEYAICKTELVLFPPNVSSPRCPEYAICKTELI
LFPQNVSRGCPEYAICKTELVLFPPNVSPGCPEYAICKTELVLFPQNVSPGCPEYAICKT
ELVLFPPNVSPGCPEYTICKTELVLFPPNVSPGCPEYAICKTELVLFPPNVSPGCPEYAI
CKTELVLFPPNVSPGCPEYAICKTELVLFPPNVSPGCPEYAICKTELVLFPQNVSPGCPE
YSICKTELILFPPNVSPGCPEYAICKTELVLFPPNVSPGCTEYAICKTELVLFPPNVSPG
CPEYAICKTELVLFPQNVSPGCPEYAICKTELVLFPPNVSPGCPEYAICKTELVLFPPNV
SPGCPEYAICKTELVLFPPNVSPGCPEYAICKTELVLFPQNVSPGCPEYSICKTELVLFP
PNVSPGCPEYSICKTELVLFPQNVSPGCPEYAICKTELVLFLPNVSPGCPEYAICKTELV
LFPPNVSPGCPEYAICKTELVLFPPNVSPGCPEYAIGKTELVLFPQNVSPGCPEYAICKT
ELVLFPPNVSPGCPEYAIGKTELVLFPPNVSPGCPEYAICKTELVLFPPNLAKFLADITL
IMNFVASREEQSQKESKATHAERLPVSIQTPTSQTGSQAPEPGYCSPKWAELIQREVEMV
LAVVIFPPLEGLKLGCPTAPGSWLALVLKAEESEINVLAAVGVLFLVRGQPSSHCVLTWQ
KRQEREDVGLVLSKLMQTYLTDNILVLFGKDGIAQALKMVCAWVSECVRMAKVELGGWKV
CSECASLEISEISKWKCQQAIESASQKEAQRSPGWGYRFRMIGIRIVFKSMEFHELTCEV
KKEDPRGPKGDQGGVRKRRRTCKGGPASEERGEPGEQNVVETERQEFAEKGVNIVTGLR

>gi568815596f:111023746_111264228|GENSCAN_predicted_CDS_6|3240_bp
atggtgatggtggtggtggtgatggtgatggtggaggtggtgatggtggcagtggtggtg
gtgatggtggtggtggcggtgatggcaggccagaaagcagacccagggaggatagcacat
gtcttcggctacactggtgaaggcatcgtgcctgctccacagcacatttttattcaagtc
ttggacgagcctgaggatgtctacaagtggaagaaaagaagccactggagcagaagatgt
ccagaatacgccatctgcaaaactgaactcgtcctctttccccagaatgtatctcccgga
tgtccagaatacgccatctgcaaaactgaactcgtcctctttccccagaatgtatctccc
ggatgtccagaatacgccatctgcaaaactgaactcgtcctctttcccccgaatgtatca
tctcccagatgtccagaatacgccatctgcaaaactgaactcgtcctctttcccccgaat
gtatctcccagatgtccagaatacgccatctgcaaaactgaactcatcctctttccccag
aatgtatctcccggatgtcgagaatacgccatctgcaaaactgaactcgtcctctttccc
ccgaatgtatctcccagatgtccagaatacgccatctgcaaaactgaactcgtcctcttt
cccccgaatgtatcatctcccagatgtccagaatacgccatctgcaaaactgaactcatc
ctctttccccagaatgtatctcgcggatgtccagaatacgccatctgcaaaactgaactc
gtcctctttcccccgaatgtatctcccggatgtccagaatacgccatctgcaaaactgaa
ctcgtcctctttccccagaatgtatctcccggatgtccagaatacgccatctgcaaaact
gaactcgtcctctttcccccgaatgtatctcccggatgtccagaatacaccatctgcaaa
actgaactcgtcctctttcccccgaatgtatctcccggatgtccagaatacgccatctgc
aaaactgaactcgtcctctttcccccgaatgtatctcccggatgtccagaatacgccatc
tgcaaaactgaactcgtcctctttcccccgaatgtatctcccggatgtccagaatacgcc
atctgcaaaactgaactcgtcctgtttcccccgaatgtatctcccggatgtccagaatac
gccatctgcaaaactgaactcgtcctctttccccagaatgtatctcccggatgtccagaa
tactccatctgcaaaactgaactcatcctctttcccccgaatgtatctcccggatgtcca
gaatacgccatctgcaaaactgaactcgtcctctttcccccgaatgtatctcccggatgt
acagaatacgccatctgcaaaactgaactcgtcctctttcccccgaatgtatctcccgga
tgtccagaatacgccatctgcaaaactgaactcgtcctctttccccagaatgtatctccc
ggatgtccagaatacgccatctgcaaaactgaactcgtcctctttcccccgaatgtatct
cccggatgtccagaatacgccatctgcaaaactgaactcgtcctctttcccccgaatgta
tctcccggatgtccagaatacgccatctgcaaaactgaactcgtcctgtttcccccgaat
gtatctcccggatgtccagaatacgccatctgcaaaactgaactcgtcctctttccccag
aatgtatctcccggatgtccagaatactccatctgcaaaactgaactcgtcctctttccc
ccgaatgtatctcccggatgtccagaatactccatctgcaaaactgaactcgtcctcttt
ccccagaatgtatctcccggatgtccagaatacgccatctgcaaaactgaactcgtcctc
tttctcccgaatgtatctcccggatgtccagaatacgccatctgcaaaactgaactcgtc
ctctttcccccgaatgtatctcccggatgtccagaatacgccatctgcaaaactgaactc
gtcctctttcccccgaatgtatctcccggatgtccagaatacgccatcggcaaaactgaa
ctcgtcctctttccccagaatgtatctcccggatgtccagaatatgccatctgcaaaact
gaactcgtcctctttcccccgaatgtatctcccggatgtccagaatacgccatcggcaaa
actgaactcgtcctgtttcccccgaatgtatctcccggatgtccagaatacgccatctgc
aaaacagaacttgtcctctttcccccaaatctagcaaaattcttagctgacattactttg
atcatgaactttgttgcctccagggaagagcagagtcaaaaagaaagcaaagccacgcat
gcagagaggttaccagtgtccatccagacgcccacttcacagacaggtagccaagcgcca
gagcccggctattgtagccctaagtgggctgaactcatccagagggaagtggagatggtg
ctggctgtggttatctttcctccactcgagggattgaagctaggctgtcccacggcaccg
ggctcgtggctggccctggttctgaaagctgaggagtctgagatcaatgtgctagcagcc
gtgggggtcctcttcctggttcgtggtcagccgtcttctcactgtgtcctcacatggcag
aagaggcaagagagagaggatgtaggtttggtcttgtctaagctcatgcagacatacctc
acagataacatcttggttctttttggcaaagatggaatagcccaggcgttgaagatggta
tgtgcatgggtgagtgagtgtgtgagaatggcaaaggtggagttgggaggatggaaagtc
tgctctgaatgtgctagtttggagatatctgagatctccaagtggaaatgtcagcaggca
atagaatctgcaagtcagaaggaagctcaaagaagtccaggttggggatatagatttaga
atgatcggcataagaatagtatttaaatccatggaatttcacgaactcacctgtgaagtg
aagaaagaggacccaagagggcctaagggagaccaaggaggagtcagaaaaaggaggagg
acctgcaaaggaggaccagccagtgaagaacgaggagagcctggagagcagaatgtggta
gaaacagagaggcaagagtttgcagaaaaaggggtcaatattgtcacaggactaagatga

>gi568815596f:111023746_111264228|GENSCAN_predicted_peptide_7|68_aa
XVGFHVLNSIIQRSSAQSRLRQSFDDPPVSHTKGPAMNKASVTEDPVPLCHKLSDLTASH
QAEPTRLL

>gi568815596f:111023746_111264228|GENSCAN_predicted_CDS_7|207_bp
nctgtaggcttccatgttctcaactctattattcagaggagttcagctcagtcacgtctg
cgccagagctttgatgacccacctgtcagccacactaagggccctgccatgaataaggcc
tccgtcactgaggatcctgtacccctctgccataaactcagtgacctgactgccagccac
caggcagaacctactagacttctctaa
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