GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:42:35

Sequence gi568815597f:203383185_203586878 : 203694 bp : 47.30% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  10299  10338   40                              -2.46
 1.01 Init +  18454  18572  119  0  2   75   52   107 0.322   5.47
 1.02 Intr +  22950  23016   67  0  1   77   40    76 0.229   0.61
 1.03 Term +  29381  29614  234  1  0   85   54   168 0.258   9.42
 1.04 PlyA +  30185  30190    6                               1.05

 2.00 Prom +  30720  30759   40                              -6.36
 2.01 Sngl +  32189  33565 1377  1  0   68   43   488 0.994  38.42
 2.02 PlyA +  33698  33703    6                               1.05

 3.09 PlyA -  34496  34491    6                               1.05
 3.08 Term -  39525  39355  171  0  0  101   44    49 0.197  -0.37
 3.07 Intr -  40059  39939  121  2  1   73   56    36 0.048  -0.60
 3.06 Intr -  46117  45894  224  1  2   77   92   122 0.251   8.43
 3.05 Intr -  47370  47322   49  2  1   61  100    15 0.329  -1.32
 3.04 Intr -  55047  54876  172  1  1  140   96    45 0.440   9.50
 3.03 Intr -  56759  56723   37  2  1   70   77    10 0.121  -4.06
 3.02 Intr -  61101  60985  117  0  0   92   84    46 0.376   5.26
 3.01 Init -  64220  64176   45  2  0   97   83    12 0.172   2.28
 3.00 Prom -  69622  69583   40                              -1.66

 4.03 PlyA -  72901  72896    6                               1.05
 4.02 Term -  73697  73584  114  2  0  105   42    29 0.048  -1.43
 4.01 Init -  82220  82071  150  2  0   97   22   111 0.080   5.44
 4.00 Prom -  89762  89723   40                              -3.06

 5.00 Prom +  96578  96617   40                              -6.66
 5.01 Init +  97791  97848   58  2  1   69   42    82 0.661   1.17
 5.02 Intr + 100194 100973  780  1  0  107   70  1154 0.867 106.95
 5.03 Term + 103522 103697  176  2  2  120   47   385 0.830  35.52
 5.04 PlyA + 105181 105186    6                              -0.45

 6.00 Prom + 106227 106266   40                              -2.96
 6.01 Init + 112822 113052  231  0  0   63   78   269 0.997  19.67
 6.02 Intr + 113793 113931  139  2  1   70  115    35 0.858   4.44
 6.03 Intr + 115497 115655  159  1  0   51   27   208 0.989  10.96
 6.04 Intr + 116465 116667  203  0  2   77   96   281 0.999  26.80
 6.05 Intr + 119730 119825   96  2  0  108  110   107 0.963  15.11
 6.06 Intr + 120366 120532  167  2  2   74   22   220 0.064  12.76
 6.07 Intr + 128788 128891  104  1  2  122   -6    62 0.067   0.02
 6.08 Intr + 130459 130542   84  2  0  119   95    -2 0.213   3.39
 6.09 Intr + 133426 133477   52  2  1  107   62     0 0.092  -2.73
 6.10 Term + 134272 134500  229  1  1  109   47    89 0.380   3.00
 6.11 PlyA + 134569 134574    6                               1.05

 7.02 PlyA - 137831 137826    6                               1.05
 7.01 Sngl - 146527 145934  594  1  0   40   54   356 0.976  23.60
 7.00 Prom - 161539 161500   40                              -3.66

 8.00 Prom + 163107 163146   40                              -6.16
 8.01 Init + 165484 165571   88  0  1   77  110    37 0.376   5.60
 8.02 Intr + 172477 172665  189  2  0  122   28    69 0.396   3.86
 8.03 Term + 178728 178903  176  1  2   19   55   455 0.993  33.22
 8.04 PlyA + 181627 181632    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   6638   6410  229  1  1   46   47   136 0.837   1.40
S.002 Intr -   7236   7178   59  0  2  147   82    27 0.848   5.68
S.003 Term + 120366 120536  171  2  0   74   36   245 0.935  15.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_1|139_aa
MEAKREDSFTRTAETPAVPAESSREAPAMEGGNVPREFDQLPASQCKLKRCFYNICRHQS
GWERSSFPAMEQSWTENVFDELREGFRRSVITNFSELREDVRTHRKEAKNLEKRLDKWLT
RINSVEKTLNDLMELKTMA

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_1|420_bp
atggaagccaaaagggaagacagcttcaccaggacagcggagacgccagcggtgcctgca
gagtcctccagagaggcccctgccatggagggtggaaacgtgcctcgtgaatttgatcag
ttaccagcaagccagtgtaaacttaagcgctgcttctacaacatctgcagacaccagtca
gggtgggaacgcagctcctttccagcaatggaacaaagctggacggagaatgtctttgac
gagttgagagaaggcttcagacgatcagtaataacaaacttttccgagctaagggaggat
gttcgaacccatcgcaaagaagctaaaaaccttgaaaaaagattagacaaatggctaact
agaataaacagtgtagagaagaccttaaatgacttgatggagctgaaaaccatggcatga

>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_2|458_aa
MGEFLDTHTLPRLNQEEAESLNRPITGSEIEAIINSLSTKKSPGPDRFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASFILIPKPGGDTTEKENFIPISLMNIDAKILSKILV
NQIQEHIKKLIHHDQVGFIPGMQGWFNICKSINAIHHINRTKDKNHMIISIDAEKAFDKI
QQPFMLQTLNKIGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPFLF
NIVLEVLARAIRQEKEITCIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSEV
SGYKINVQKSQAFLYTNNRPTESRMSEFPFTITTKRIKYLGIQLTRDVKDLFKENYKPLL
NEIKEDRNKWKNIPCSWIGRINIVKMTILPKVIYRFNAIPIKLPMTFFTELEKTTVKFIW
NQKRGGIAKTILSQKNKAGGIMLPDFKLYYKATVTKTA

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_2|1377_bp
atgggtgaattcctggacacacacaccctcccaagactaaaccaggaagaagctgaatcc
ctgaatagaccaataacaggctctgaaattgaggcaataattaatagcctatcgaccaaa
aaaagtccaggaccagaccgattcacagccgaattctaccagaggtacaaagaggagctg
gtaccattccttctgaagctattccaatcaatagaaaaagaaggaatcctccctaactca
ttttatgaggccagcttcatcctgataccaaagcctggcggagacacaacagaaaaagag
aattttataccaatatccctgatgaacatcgatgcaaaaatcctcagtaaaatactggta
aaccaaatccaggagcacatcaaaaagcttatccaccacgatcaagttggcttcatccct
gggatgcaaggctggttcaacatatgcaaatcaataaatgcaatccatcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacagcccttcatgctacaaactctcaataaaataggtattgatgggacatacctcaaa
ataataagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccattcctattc
aacatagtgttggaagttctggccagggcaatcaggcaggagaaagaaataacgtgtatt
caattaggaaaagaagaagtcaaattgtccctgtttgcagatgacatgattgtatattta
gagaatcccattgtctcagcccaaaatctcctcaagctgataagcaacttcagcgaagtc
tcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaataacagacca
acagagagccgaatgagtgaattcccattcacaattactacaaagagaataaaataccta
ggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctc
aatgaaataaaagaggacagaaacaaatggaagaacattccatgctcatggataggaaga
atcaatattgtgaaaatgactatactgcccaaggtaatttatagattcaatgccatcccc
atcaagctaccaatgactttcttcacagaattagaaaaaactactgtaaagttcatatgg
aaccaaaaaagaggcggcattgccaagacaatcctcagccaaaagaacaaagctggaggc
atcatgctacctgacttcaaactatactacaaggctacggtaaccaaaacagcatga

>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_3|311_aa
MEVMAAKSWWKREVGMLTFGTQPLCCKEAHATWRDTLEEEPKPSPNSQCQLASHWSLLRG
PHLLKSDGQRTDDIPHIRVAPPTSHSRPDISALLNARLWRRPYLCPPHRSSSCRPGQTET
KQLGGHLAMSGDNFGCHNWKVFGIVPALNKSKQLQFSGLNSGHLSCSYTVYLCLSTQFIH
QSGSVGQTRQVVPRVRSSAVDHDGTLENEREVTAQLLEQTVSSGSVSSLQPGKFYSFQSR
QRRLSISSTIKMGQTALTRTIPPLLLLPALLHVKAEFIIPFSNGILDIPLQPLINWIDSL
CLFLFTNSQGC

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_3|936_bp
atggaggtcatggctgcaaaaagctggtggaaaagggaagttggaatgctcacctttgga
acccagccactatgttgcaaggaggcccatgccacatggagagatacacttgaagaggaa
ccaaagccttctcccaacagccagtgccaacttgccagccattggtctctcctgcgagga
cctcaccttctgaagtcagatgggcagcggactgatgatatcccgcatattagggtggcc
cctcccacatcccattcccgcccagacatctcagccctgctcaatgcccgcctctggcgg
agaccttatctctgcccaccacaccgcagctccagctgccgtcctgggcagactgaaacc
aaacagctaggagggcatttggcaatgtctggagacaattttggttgtcacaactggaag
gtttttggcattgtgcctgcactgaataaaagcaagcagctccagttctcggggctgaac
tccggccacttgagctgctcttacactgtatacctgtgtctgagtactcagttcatccac
cagtcagggtctgtgggacagactaggcaggtggtgccccgtgtgaggagcagcgcagtg
gatcatgatggaaccctcgaaaatgaacgtgaagtgactgcgcaactcttggagcagaca
gtgtcatctggctcagtctccagccttcagccaggaaaattctacagctttcagagcaga
cagagaagactcagtatctcttcaaccatcaagatgggacagactgccctaactcggaca
atacctcctcttttacttctccctgcccttttgcatgtcaaagcagaattcatcattccg
ttctccaatggaatattggatattccattacagcctttaatcaactggattgatagtctc
tgcctcttcctcttcaccaatagtcagggatgctag

>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_4|87_aa
MEDPEHCHEVSMPRDTVFPSSVYAGFGVINNGFSQESSRPRLRAREVIYWSQHSSKNNPV
TPVASNLRGKPKALGPLASPSPLLLLL

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_4|264_bp
atggaggatccagagcactgtcatgaggtgtccatgccaagagacactgtgtttccttct
agtgtttatgctggctttggcgtcatcaacaatggatttagccaagagagctccaggccg
aggctacgagctcgggaagtaatttactggtctcaacacagcagcaagaacaatcctgtt
actccagtggcttccaatctcagaggaaaacccaaggctctgggccctttggcttccccg
tccccactcctcttacttctctga

>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_5|337_aa
MKTRAALALSQGNPAPPSTGPPSIFPDCPRECYCPPDFPSALYCDSRNLRKVPVIPPRIH
YLYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKNQLEEV
PSALPRNLEQLRLSQNHISRIPPGVFSKLENLLLLDLQHNRLSDGVFKPDTFHGLKNLMQ
LNLAHNILRKMPPRVPTAIHQLYLDSNKIETIPNGYFKSFPNLAFIRLNYNKLTDRGLPK
NSFNISNLLVLHLSHNRISSVPAINNRLEHLYLNNNSIEKINGTQICPNDLVAFHDFSSD
LENVPHLRYLRLDGNYLKPPIPLDLMMCFRLLQSVVI

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_5|1014_bp
atgaagaccagggctgccctggcactgagccaaggaaaccccgccccgcccagcacaggc
cctccatctatcttccctgactgtccccgcgaatgctactgcccccctgatttcccatct
gccctctactgtgatagccgcaacctgcgaaaggtccctgtcatcccgccccgcatccat
tacctctatctccagaacaacttcatcactgagctcccggtggagtccttccagaatgcc
acaggcctgcgatggattaacctggacaacaaccgaatccgcaagatagaccagagggtg
ctggagaaactgcccggcctggtgttcctctacatggagaagaaccagttggaagaggtc
ccctcggccctgccccggaacctggagcagctgaggctgagccagaaccacatctccaga
atcccgcctggtgtcttcagcaagctggagaacctgctgctcctggatctccagcacaac
aggctgagcgacggcgtcttcaagcccgacaccttccatggcctcaagaacctcatgcag
ctcaacctggcccacaacatcctgagaaagatgccgcccagggtccccaccgccattcac
cagctctacctggacagtaacaagattgagaccatccctaacggatacttcaagagcttt
cccaatcttgccttcattcggcttaactacaacaagctgacagacaggggactccccaag
aactcctttaatatctccaacctgcttgtgctccacctgtcccacaacaggatcagcagt
gtgcccgccatcaacaacaggctggaacacctgtacctcaacaacaatagcatcgagaaa
atcaacggaacccagatttgccccaacgacctagtggcgttccatgacttctcctcggac
ctggagaacgtgccacacctgcgctacctgcggctggatggaaactacttgaagccgccc
atcccgctggacctcatgatgtgcttccgcctcctgcagtccgtggtcatctag

>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_6|487_aa
MRLLAFLSLLALVLQETGTASLPRKERKRREEQMPREGDSFEVLPLRNDVLNPDNYGEVI
DLSNYEELTDYGDQLPEVKVTSLAPATSISPAKSTTAPGTPSSNPTMTRPTTAGLLLSSQ
PNHGLPTCLVCVCLGSSVYCDDIDLEDIPPLPRRTAYLYARFNRISRIRAEDFKGLTKLK
RIDLSNNLISSIDNDAFRLLHALQDLILPENQLEALPVLPSGIEFLDVRLNRLQSSGIQP
AAFRAMEKLQFLYLSDNLLDSIPGPLPLSLRSVHLQNNLIETMQRDVFCDPEEHKHTRRQ
LEDIRLDGNPINLSLFPSAYFCLPRLPIGRFTALQFERVQHQTYCLITSMKSRNCPLTSC
LEYRKRRRLLREGSPQGMRDKLPNPVADGSASLHGPQFCGTDDRLGTAERERYGSWGGYT
WGAVTVGNNANSDRHGARDRKGALGWGGLEDSSEEAAGELTLPLLIRLMSLPSGQAAMEG
VPTLTAA

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_6|1464_bp
atgaggctcctggctttcctgagtctgctggccttggtgctgcaggagacagggacagct
tctctcccaaggaaggagaggaagaggagagaggagcagatgcccagggaaggcgattcc
tttgaagttctgcctctgcggaatgatgtcctgaacccagacaactatggtgaagtcatt
gacctgagcaactatgaggagctcacagattatggggaccaactccccgaggttaaggtg
actagcctcgctcctgcaaccagcatcagtcccgccaagagcactacggctccagggaca
ccctcgtcaaaccccacgatgaccagacctactacagcagggctgctactgagttcccag
cccaaccatggtctgcccacctgcctggtctgcgtgtgcctcggttcctctgtgtattgc
gatgacattgacctagaggacattcctcctcttcctcggaggactgcctacctgtatgca
cgcttcaaccgcatcagccgtatcagggccgaagacttcaaagggctgacaaagttgaag
aggattgacctctccaacaacctcatttcctccatcgataatgatgccttccgcctgcta
catgccctccaggacctcatcctcccagagaaccagttggaagctctgcccgtgctgccc
agtggcattgagttcctggatgtccgcctaaatcggctccagagctcggggatacagcct
gcagccttcagggcaatggagaagctgcagttcctttacctgtcagacaacctgctggat
tctatcccggggcctttgcccctgagcctgcgctctgtacacctgcagaataacctgata
gagaccatgcagagagacgtcttctgtgaccccgaggagcacaaacacacccgcaggcag
ctggaagacatccgcctggatggcaaccccatcaacctcagcctcttccccagcgcctac
ttctgcctgcctcggctccccatcggccgcttcacagcattacagtttgagagggtacag
caccaaacttactgcctcattacttccatgaagtccaggaactgcccacttacctcctgt
ctggaataccggaagagaagaaggctactcagagaggggtccccacaagggatgagggac
aagttgcctaaccctgtggcagacggctctgcttctcttcatggtcctcagttctgtggc
acagatgacaggttggggacagcagagagggaaaggtatgggtcctggggaggttatact
tggggggcagtaactgtaggcaataatgctaacagtgacagacatggtgctcgggacagg
aagggagccttgggctggggtgggctggaagattcctcggaggaggcagccggtgaactg
acactgcccctcctcattcgcttaatgagcctgccctcaggccaggcagccatggagggc
gtgcccacactgacagctgcctaa

>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_7|197_aa
MVKEHPTAWGQQGNRNWGDSTLLHGSSKETGNGDSILLHGGAGKQELGAQHPTAWGQQGN
RNWGHSILLHGGSKETGTGGTASYCMGAAGKHELGDSILLHGGSKETGNGYSILLHGGSR
EMGTGQTASYCMGAAGKQELGGTASYCMGAAGKRELGGQHPTAQKEENPRGCVGGGSFSE
NKQFSEFRHIPEARKET

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_7|594_bp
atggtaaaagagcatcctactgcgtgggggcagcagggaaacaggaactggggggacagc
accctactgcatgggagcagcaaggaaacaggaaatggggacagcatcctactgcatggg
ggcgcagggaaacaggaactgggggcacagcatcctactgcatgggggcagcaaggaaac
aggaactgggggcacagcatcctactgcatgggggcagcaaggaaacaggaactgggggc
acagcatcctactgcatgggggcagcagggaaacatgaactgggggacagcatcctactg
catgggggcagcaaggaaacaggaaatgggtacagcatcctactgcatgggggcagcagg
gaaatgggaactgggcagacagcatcctactgcatgggggcagcagggaaacaggaactg
ggggggacagcatcctactgcatgggggcagcagggaaacgagaactggggggacagcat
cctactgcacagaaagaggagaaccccaggggatgtgtgggtggtggcagcttttcagag
aacaagcagttctctgagtttcggcacattcctgaggctagaaaggagacctga

>gi568815597f:203383185_203586878|GENSCAN_predicted_peptide_8|150_aa
MSVNDQVIIQGTEDKKTHSLGSPSKNIHAGAPSWATPPAPSHCGKIQVSKMASQIFLRWR
GSCPLEKRQPPSATERKLYSPAAGPSRPLTDAEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEEERRKKKNKNKNKKKKRKRKKKKCCL

>gi568815597f:203383185_203586878|GENSCAN_predicted_CDS_8|453_bp
atgtcagtaaatgatcaggttattattcaaggaacagaagacaagaagacacactcccta
ggaagtcccagcaagaatattcatgcaggtgcaccttcctgggccacacccccagccccc
tcacactgtgggaaaatccaggtatccaaaatggcaagccagattttcctgcggtggcgt
ggcagctgccccttggaaaagaggcagcccccttcagctactgagagaaagctgtactcc
ccagcagctggtcccagcaggcccctcacagatgcagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaggaggaagaggaagag
gaagaggaagaagaagaaagaaggaagaagaagaacaagaacaagaacaagaaaaagaag
aggaagaggaagaagaagaaatgctgcctttga