Result of FASTA (ccds) for pF1KB3501
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3501, 380 aa
  1>>>pF1KB3501 380 - 380 aa - 380 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2012+/-0.00101; mu= 17.2386+/- 0.061
 mean_var=64.4598+/-13.118, 0's: 0 Z-trim(103.1): 48  B-trim: 0 in 0/51
 Lambda= 0.159746
 statistics sampled from 7202 (7246) to 7202 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.588), E-opt: 0.2 (0.223), width:  16
 Scan time:  1.820

The best scores are:                                      opt bits E(32554)
CCDS32834.1 ST8SIA3 gene_id:51046|Hs108|chr18      ( 380) 2567 600.6 7.2e-172
CCDS81919.1 ST8SIA2 gene_id:8128|Hs108|chr15       ( 354)  817 197.3 1.7e-50
CCDS10372.1 ST8SIA2 gene_id:8128|Hs108|chr15       ( 375)  817 197.3 1.8e-50
CCDS4091.1 ST8SIA4 gene_id:7903|Hs108|chr5         ( 359)  765 185.3 7.2e-47
CCDS31158.1 ST8SIA6 gene_id:338596|Hs108|chr10     ( 398)  651 159.1 6.3e-39
CCDS8697.1 ST8SIA1 gene_id:6489|Hs108|chr12        ( 356)  599 147.1 2.3e-35
CCDS77183.1 ST8SIA5 gene_id:29906|Hs108|chr18      ( 345)  497 123.6 2.7e-28
CCDS11930.1 ST8SIA5 gene_id:29906|Hs108|chr18      ( 376)  497 123.6 2.9e-28
CCDS77184.1 ST8SIA5 gene_id:29906|Hs108|chr18      ( 412)  497 123.6 3.1e-28
CCDS47252.1 ST8SIA4 gene_id:7903|Hs108|chr5        ( 168)  300 78.0 6.9e-15
CCDS673.1 ST6GALNAC5 gene_id:81849|Hs108|chr1      ( 336)  256 68.0 1.4e-11
CCDS6883.1 ST6GALNAC4 gene_id:27090|Hs108|chr9     ( 302)  252 67.1 2.4e-11


>>CCDS32834.1 ST8SIA3 gene_id:51046|Hs108|chr18           (380 aa)
 initn: 2567 init1: 2567 opt: 2567  Z-score: 3199.0  bits: 600.6 E(32554): 7.2e-172
Smith-Waterman score: 2567; 100.0% identity (100.0% similar) in 380 aa overlap (1-380:1-380)

               10        20        30        40        50        60
pF1KB3 MRNCKMARVASVLGLVMLSVALLILSLISYVSLKKENIFTTPKYASPGAPRMYMFHAGFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MRNCKMARVASVLGLVMLSVALLILSLISYVSLKKENIFTTPKYASPGAPRMYMFHAGFR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 SQFALKFLDPSFVPITNSLTQELQEKPSKWKFNRTAFLHQRQEILQHVDVIKNFSLTKNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SQFALKFLDPSFVPITNSLTQELQEKPSKWKFNRTAFLHQRQEILQHVDVIKNFSLTKNS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 VRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKHYNICAVVGNSGILTGSQCGQEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKHYNICAVVGNSGILTGSQCGQEI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 DKSDFVFRCNFAPTEAFQRDVGRKTNLTTFNPSILEKYYNNLLTIQDRNNFFLSLKKLDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DKSDFVFRCNFAPTEAFQRDVGRKTNLTTFNPSILEKYYNNLLTIQDRNNFFLSLKKLDG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 AILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPGNIMQHVNRYWKNKHLSPKRLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPGNIMQHVNRYWKNKHLSPKRLS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 TGILMYTLASAICEEIHLYGFWPFGFDPNTREDLPYHYYDKKGTKFTTKWQESHQLPAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TGILMYTLASAICEEIHLYGFWPFGFDPNTREDLPYHYYDKKGTKFTTKWQESHQLPAEF
              310       320       330       340       350       360

              370       380
pF1KB3 QLLYRMHGEGLTKLTLSHCA
       ::::::::::::::::::::
CCDS32 QLLYRMHGEGLTKLTLSHCA
              370       380

>>CCDS81919.1 ST8SIA2 gene_id:8128|Hs108|chr15            (354 aa)
 initn: 716 init1: 410 opt: 817  Z-score: 1019.8  bits: 197.3 E(32554): 1.7e-50
Smith-Waterman score: 817; 39.1% identity (74.7% similar) in 312 aa overlap (70-379:44-350)

      40        50        60        70         80        90        
pF1KB3 TTPKYASPGAPRMYMFHAGFRSQFALKFLDPSFVPITN-SLTQELQEKPSKWKFNRTAFL
                                     :. :  .: :. ...:   :::. :.:  :
CCDS81 TLLVVFLIFADISEIEEEIGAEVVINGSSSPAVVDRSNESIKHNIQPASSKWRHNQTLSL
            20        30        40        50        60        70   

      100       110       120       130       140       150        
pF1KB3 HQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKH
       . :..::. .:. :..:. :.... :...:: ..  . ....:.:.  ::: .::. :::
CCDS81 RIRKQILKFLDAEKDISVLKGTLKPGDIIHYIFDRDS-TMNVSQNLYELLPRTSPLKNKH
            80        90       100       110        120       130  

      160       170       180       190       200       210        
pF1KB3 YNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTEAFQRDVGRKTNLTTFNPSILEKY
       .. ::.:::::.: .: ::::::  .::.:::.::.. . :::: ::.:.:.:::.... 
CCDS81 FGTCAIVGNSGVLLNSGCGQEIDAHSFVIRCNLAPVQEYARDVGLKTDLVTMNPSVIQRA
            140       150       160       170       180       190  

      220       230       240       250       260       270        
pF1KB3 YNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWP
       ...:..   :....  :..:.:.:::::::. . .   .. . .....:  ...:. :.:
CCDS81 FEDLVNATWREKLLQRLHSLNGSILWIPAFMARGGKERVEWVNELILKH--HVNVRTAYP
            200       210       220       230       240         250

      280        290       300       310       320       330       
pF1KB3 GNIMQHVNR-YWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTREDLPYH
       .  . :. : :: ....  :: .::.::::::. .:..:.::::::: .: : .. . ::
CCDS81 SLRLLHAVRGYWLTNKVHIKRPTTGLLMYTLATRFCKQIYLYGFWPFPLDQN-QNPVKYH
              260       270       280       290       300          

       340       350       360       370       380   
pF1KB3 YYDKKGTKFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA   
       :::.    .:..    : .: ::. :  .: .:  :::...:    
CCDS81 YYDSLKYGYTSQ-ASPHTMPLEFKALKSLHEQGALKLTVGQCDGAT
     310       320        330       340       350    

>>CCDS10372.1 ST8SIA2 gene_id:8128|Hs108|chr15            (375 aa)
 initn: 716 init1: 410 opt: 817  Z-score: 1019.4  bits: 197.3 E(32554): 1.8e-50
Smith-Waterman score: 817; 39.1% identity (74.7% similar) in 312 aa overlap (70-379:65-371)

      40        50        60        70         80        90        
pF1KB3 TTPKYASPGAPRMYMFHAGFRSQFALKFLDPSFVPITN-SLTQELQEKPSKWKFNRTAFL
                                     :. :  .: :. ...:   :::. :.:  :
CCDS10 SGGRGTIRSAVNSLHSKSNRAEVVINGSSSPAVVDRSNESIKHNIQPASSKWRHNQTLSL
           40        50        60        70        80        90    

      100       110       120       130       140       150        
pF1KB3 HQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKH
       . :..::. .:. :..:. :.... :...:: ..  . ....:.:.  ::: .::. :::
CCDS10 RIRKQILKFLDAEKDISVLKGTLKPGDIIHYIFDRDS-TMNVSQNLYELLPRTSPLKNKH
          100       110       120       130        140       150   

      160       170       180       190       200       210        
pF1KB3 YNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAPTEAFQRDVGRKTNLTTFNPSILEKY
       .. ::.:::::.: .: ::::::  .::.:::.::.. . :::: ::.:.:.:::.... 
CCDS10 FGTCAIVGNSGVLLNSGCGQEIDAHSFVIRCNLAPVQEYARDVGLKTDLVTMNPSVIQRA
           160       170       180       190       200       210   

      220       230       240       250       260       270        
pF1KB3 YNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWP
       ...:..   :....  :..:.:.:::::::. . .   .. . .....:  ...:. :.:
CCDS10 FEDLVNATWREKLLQRLHSLNGSILWIPAFMARGGKERVEWVNELILKH--HVNVRTAYP
           220       230       240       250       260         270 

      280        290       300       310       320       330       
pF1KB3 GNIMQHVNR-YWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTREDLPYH
       .  . :. : :: ....  :: .::.::::::. .:..:.::::::: .: : .. . ::
CCDS10 SLRLLHAVRGYWLTNKVHIKRPTTGLLMYTLATRFCKQIYLYGFWPFPLDQN-QNPVKYH
             280       290       300       310       320        330

       340       350       360       370       380   
pF1KB3 YYDKKGTKFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA   
       :::.    .:..    : .: ::. :  .: .:  :::...:    
CCDS10 YYDSLKYGYTSQ-ASPHTMPLEFKALKSLHEQGALKLTVGQCDGAT
              340        350       360       370     

>>CCDS4091.1 ST8SIA4 gene_id:7903|Hs108|chr5              (359 aa)
 initn: 677 init1: 392 opt: 765  Z-score: 955.0  bits: 185.3 E(32554): 7.2e-47
Smith-Waterman score: 765; 39.3% identity (73.5% similar) in 298 aa overlap (83-379:64-356)

             60        70        80        90       100       110  
pF1KB3 YMFHAGFRSQFALKFLDPSFVPITNSLTQELQEKPSKWKFNRTAFLHQRQEILQHVDVIK
                                     .:..   ::.: .  :. :..::. .:. .
CCDS40 TQLIGDGELSLSRSLVNSSDKIIRKAGSSIFQHNVEGWKINSSLVLEIRKNILRFLDAER
            40        50        60        70        80        90   

            120       130       140       150       160       170  
pF1KB3 NFSLTKNSVRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKHYNICAVVGNSGILT
       . :..:.: . :...::   ... ...::....::::.:::. :.... :::::::::: 
CCDS40 DVSVVKSSFKPGDVIHY-VLDRRRTLNISHDLHSLLPEVSPMKNRRFKTCAVVGNSGILL
           100       110        120       130       140       150  

            180       190       200       210       220       230  
pF1KB3 GSQCGQEIDKSDFVFRCNFAPTEAFQRDVGRKTNLTTFNPSILEKYYNNLLTIQDRNNFF
        :.::.:::. .::.:::.::.  :  ::: :... :.:::.... .... . .::..: 
CCDS40 DSECGKEIDSHNFVIRCNLAPVVEFAADVGTKSDFITMNPSVVQRAFGGFRNESDREKFV
            160       170       180       190       200       210  

            240       250       260       270       280        290 
pF1KB3 LSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPGNIMQHVNR-YWKN
         :. :. ..::::::. . .   .. .  ...  ...:::. :.:.  . :. : :: .
CCDS40 HRLSMLNDSVLWIPAFMVKGGEKHVEWVNALIL--KNKLKVRTAYPSLRLIHAVRGYWLT
            220       230       240         250       260       270

             300       310       320       330       340       350 
pF1KB3 KHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTREDLPYHYYDKKGTKFTTKWQ
       ...  :: :::.::::::. .:.::::::::::  : : .  . :::::    .. ..  
CCDS40 NKVPIKRPSTGLLMYTLATRFCDEIHLYGFWPFPKDLNGKA-VKYHYYDDLKYRYFSN-A
              280       290       300       310        320         

             360       370       380  
pF1KB3 ESHQLPAEFQLLYRMHGEGLTKLTLSHCA  
         :..: ::. :  .:..:  ::: ..:   
CCDS40 SPHRMPLEFKTLNVLHNRGALKLTTGKCVKQ
      330       340       350         

>>CCDS31158.1 ST8SIA6 gene_id:338596|Hs108|chr10          (398 aa)
 initn: 445 init1: 204 opt: 651  Z-score: 812.3  bits: 159.1 E(32554): 6.3e-39
Smith-Waterman score: 651; 35.8% identity (67.5% similar) in 302 aa overlap (82-379:109-395)

              60        70        80        90       100       110 
pF1KB3 MYMFHAGFRSQFALKFLDPSFVPITNSLTQELQEKPSKWKFNRTAFLHQRQEILQHVDVI
                                     ..:  :  :: .   . . : .. .  :..
CCDS31 EKCKNLQYGIESFSNKTKGYSENDYLQIITDIQSCP--WKRQAEEYANFRAKLASCCDAV
       80        90       100       110         120       130      

             120       130       140       150       160       170 
pF1KB3 KNFSLTKNSVRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKHYNICAVVGNSGIL
       .:: ...:.. .:  : :.  :.: .  :..:.  ..:  .:...  :: ::::::.:::
CCDS31 QNFVVSQNNTPVGTNMSYEVESKKEI-PIKKNIFHMFPVSQPFVDYPYNQCAVVGNGGIL
        140       150       160        170       180       190     

             180       190        200       210       220       230
pF1KB3 TGSQCGQEIDKSDFVFRCNFAPTEA-FQRDVGRKTNLTTFNPSILEKYYNNLLTIQDRNN
       . : :: ::::::::::::. :: .  ..::: ::::.:.::::.   :.::   .... 
CCDS31 NKSLCGTEIDKSDFVFRCNLPPTTGDVSKDVGSKTNLVTINPSIITLKYGNL---KEKKA
         200       210       220       230       240          250  

               240       250       260       270       280         
pF1KB3 FFL-SLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPGNIMQHVNRYW
       .:: ..     :.. .::: :.... ..  .   . : ... :: .  : . .. .  .:
CCDS31 LFLEDIATYGDAFFLLPAFSFRANTGTSFKVYYTLEESKARQKVLFFHP-KYLKDLALFW
            260       270       280       290       300        310 

     290       300       310       320       330         340       
pF1KB3 KNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTREDLP--YHYYDKKGTKFT
       ..: ..  :::::... ..:  .:....:::::::.   .: ::.:  .::::.:  :  
CCDS31 RTKGVTAYRLSTGLMITSVAVELCKNVKLYGFWPFS---KTVEDIPVSHHYYDNKLPK--
             320       330       340          350       360        

       350       360       370       380  
pF1KB3 TKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA  
          .  ::.: :.. . ..: .:. :: .:.:   
CCDS31 ---HGFHQMPKEYSQILQLHMKGILKLQFSKCEVA
           370       380       390        

>>CCDS8697.1 ST8SIA1 gene_id:6489|Hs108|chr12             (356 aa)
 initn: 420 init1: 155 opt: 599  Z-score: 748.3  bits: 147.1 E(32554): 2.3e-35
Smith-Waterman score: 599; 31.4% identity (66.0% similar) in 315 aa overlap (67-379:44-347)

         40        50        60        70         80        90     
pF1KB3 NIFTTPKYASPGAPRMYMFHAGFRSQFALKFLDPSF-VPITNSLTQELQEKPSKWKFNRT
                                     .. : . .:  . ..: . .. . :. :.:
CCDS86 GAMAVLAWKFPRTRLPMGASALCVVVLCWLYIFPVYRLPNEKEIVQGVLQQGTAWRRNQT
            20        30        40        50        60        70   

         100       110       120       130       140       150     
pF1KB3 AFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIM
       :    :... .  :  . :..:: .  .:. : :: .   : :.:.:.  ::.:...:..
CCDS86 AARAFRKQMEDCCDPAHLFAMTKMNSPMGKSMWYD-GEFLYSFTIDNSTYSLFPQATPFQ
            80        90       100        110       120       130  

         160       170       180       190        200       210    
pF1KB3 NKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAP-TEAFQRDVGRKTNLTTFNPSI
           . ::::::.:::  : ::..::...::.:::. : .  . .::: :..:.: ::::
CCDS86 -LPLKKCAVVGNGGILKKSGCGRQIDEANFVMRCNLPPLSSEYTKDVGSKSQLVTANPSI
             140       150       160       170       180       190 

          220       230       240       250       260       270    
pF1KB3 LEKYYNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQ
       ... ..:::   .:..:  ..:  . . ...::: ..:..  .  .   . .  ..  : 
CCDS86 IRQRFQNLL--WSRKTFVDNMKIYNHSYIYMPAFSMKTGTEPSLRVYYTLSDVGANQTVL
             200         210       220       230       240         

          280       290       300       310       320       330    
pF1KB3 LAWPGNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFWPFGFDPNTREDL
       .: : :... ....::.. .  ::::::... . : ..:::. .::::::. . . .. .
CCDS86 FANP-NFLRSIGKFWKSRGIHAKRLSTGLFLVSAALGLCEEVAIYGFWPFSVNMH-EQPI
     250        260       270       280       290       300        

          340       350       360       370       380        
pF1KB3 PYHYYDKKGTKFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA        
        .::::.     .  ..  : .: ::  :. .:  :  .. :. :         
CCDS86 SHHYYDN-----VLPFSGFHAMPEEFLQLWYLHKIGALRMQLDPCEDTSLQPTS
       310            320       330       340       350      

>>CCDS77183.1 ST8SIA5 gene_id:29906|Hs108|chr18           (345 aa)
 initn: 401 init1: 168 opt: 497  Z-score: 621.4  bits: 123.6 E(32554): 2.7e-28
Smith-Waterman score: 497; 31.0% identity (64.2% similar) in 268 aa overlap (114-380:87-343)

            90       100       110       120       130       140   
pF1KB3 QEKPSKWKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKYVFSISNN
                                     :.  ::.  .:  ..:. ..   .. :...
CCDS77 LQMCKWAMNISEANQFKSTLSRCCNAPAFLFTTQKNTP-LGTKLKYEVDTSG-IYHINQE
         60        70        80        90        100        110    

           150       160       170       180       190        200  
pF1KB3 FRSLLPDVSPIMNKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAP-TEAFQRDVG
       .  ..:   : . .... ::::::.::: .:.::.::...:::::::. : .: .  :::
CCDS77 IFRMFPKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRCNLPPISEKYTMDVG
          120       130       140       150       160       170    

            210       220       230       240       250       260  
pF1KB3 RKTNLTTFNPSILEKYYNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVD
        ::...: ::::. . ...:   . :  :.  :.  ..: . .:::. .:  : .   : 
CCDS77 VKTDVVTVNPSIITERFHKLE--KWRRPFYRVLQVYENASVLLPAFY-NTRNTDVSIRVK
          180       190         200       210        220       230 

            270       280       290       300       310       320  
pF1KB3 FFVEHRGQLKVQLAWPGNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFW
       . ..   . ..   .  . . .:.::: .  .  ::.:::... : :  .:::.::.:::
CCDS77 YVLDDFESPQAVYYFHPQYLVNVSRYWLSLGVRAKRISTGLILVTAALELCEEVHLFGFW
             240       250       260       270       280       290 

            330       340       350       360       370       380  
pF1KB3 PFGFDPNTREDLPYHYYDKKGTKFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA  
        : ..:.    . .::::.   .        : .:.:.  . ..:..:. ..  . :.  
CCDS77 AFPMNPSGLY-ITHHYYDNVKPR-----PGFHAMPSEIFNFLHLHSRGILRVHTGTCSCC
             300        310            320       330       340     

>>CCDS11930.1 ST8SIA5 gene_id:29906|Hs108|chr18           (376 aa)
 initn: 401 init1: 168 opt: 497  Z-score: 620.9  bits: 123.6 E(32554): 2.9e-28
Smith-Waterman score: 497; 31.0% identity (64.2% similar) in 268 aa overlap (114-380:118-374)

            90       100       110       120       130       140   
pF1KB3 QEKPSKWKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKYVFSISNN
                                     :.  ::.  .:  ..:. ..   .. :...
CCDS11 LQMCKWAMNISEANQFKSTLSRCCNAPAFLFTTQKNTP-LGTKLKYEVDTSG-IYHINQE
        90       100       110       120        130        140     

           150       160       170       180       190        200  
pF1KB3 FRSLLPDVSPIMNKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAP-TEAFQRDVG
       .  ..:   : . .... ::::::.::: .:.::.::...:::::::. : .: .  :::
CCDS11 IFRMFPKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRCNLPPISEKYTMDVG
         150       160       170       180       190       200     

            210       220       230       240       250       260  
pF1KB3 RKTNLTTFNPSILEKYYNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVD
        ::...: ::::. . ...:   . :  :.  :.  ..: . .:::. .:  : .   : 
CCDS11 VKTDVVTVNPSIITERFHKLE--KWRRPFYRVLQVYENASVLLPAFY-NTRNTDVSIRVK
         210       220         230       240       250        260  

            270       280       290       300       310       320  
pF1KB3 FFVEHRGQLKVQLAWPGNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFW
       . ..   . ..   .  . . .:.::: .  .  ::.:::... : :  .:::.::.:::
CCDS11 YVLDDFESPQAVYYFHPQYLVNVSRYWLSLGVRAKRISTGLILVTAALELCEEVHLFGFW
            270       280       290       300       310       320  

            330       340       350       360       370       380  
pF1KB3 PFGFDPNTREDLPYHYYDKKGTKFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA  
        : ..:.    . .::::.   .        : .:.:.  . ..:..:. ..  . :.  
CCDS11 AFPMNPSGLY-ITHHYYDNVKPR-----PGFHAMPSEIFNFLHLHSRGILRVHTGTCSCC
            330        340            350       360       370      

>>CCDS77184.1 ST8SIA5 gene_id:29906|Hs108|chr18           (412 aa)
 initn: 401 init1: 168 opt: 497  Z-score: 620.3  bits: 123.6 E(32554): 3.1e-28
Smith-Waterman score: 497; 31.0% identity (64.2% similar) in 268 aa overlap (114-380:154-410)

            90       100       110       120       130       140   
pF1KB3 QEKPSKWKFNRTAFLHQRQEILQHVDVIKNFSLTKNSVRIGQLMHYDYSSHKYVFSISNN
                                     :.  ::.  .:  ..:. ..   .. :...
CCDS77 LQMCKWAMNISEANQFKSTLSRCCNAPAFLFTTQKNTP-LGTKLKYEVDTSG-IYHINQE
           130       140       150       160        170        180 

           150       160       170       180       190        200  
pF1KB3 FRSLLPDVSPIMNKHYNICAVVGNSGILTGSQCGQEIDKSDFVFRCNFAP-TEAFQRDVG
       .  ..:   : . .... ::::::.::: .:.::.::...:::::::. : .: .  :::
CCDS77 IFRMFPKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRCNLPPISEKYTMDVG
             190       200       210       220       230       240 

            210       220       230       240       250       260  
pF1KB3 RKTNLTTFNPSILEKYYNNLLTIQDRNNFFLSLKKLDGAILWIPAFFFHTSATVTRTLVD
        ::...: ::::. . ...:   . :  :.  :.  ..: . .:::. .:  : .   : 
CCDS77 VKTDVVTVNPSIITERFHKLE--KWRRPFYRVLQVYENASVLLPAFY-NTRNTDVSIRVK
             250       260         270       280        290        

            270       280       290       300       310       320  
pF1KB3 FFVEHRGQLKVQLAWPGNIMQHVNRYWKNKHLSPKRLSTGILMYTLASAICEEIHLYGFW
       . ..   . ..   .  . . .:.::: .  .  ::.:::... : :  .:::.::.:::
CCDS77 YVLDDFESPQAVYYFHPQYLVNVSRYWLSLGVRAKRISTGLILVTAALELCEEVHLFGFW
      300       310       320       330       340       350        

            330       340       350       360       370       380  
pF1KB3 PFGFDPNTREDLPYHYYDKKGTKFTTKWQESHQLPAEFQLLYRMHGEGLTKLTLSHCA  
        : ..:.    . .::::.   .        : .:.:.  . ..:..:. ..  . :.  
CCDS77 AFPMNPSGLY-ITHHYYDNVKPR-----PGFHAMPSEIFNFLHLHSRGILRVHTGTCSCC
      360        370       380            390       400       410  

>>CCDS47252.1 ST8SIA4 gene_id:7903|Hs108|chr5             (168 aa)
 initn: 296 init1: 208 opt: 300  Z-score: 380.7  bits: 78.0 E(32554): 6.9e-15
Smith-Waterman score: 300; 41.5% identity (80.2% similar) in 106 aa overlap (83-188:64-168)

             60        70        80        90       100       110  
pF1KB3 YMFHAGFRSQFALKFLDPSFVPITNSLTQELQEKPSKWKFNRTAFLHQRQEILQHVDVIK
                                     .:..   ::.: .  :. :..::. .:. .
CCDS47 TQLIGDGELSLSRSLVNSSDKIIRKAGSSIFQHNVEGWKINSSLVLEIRKNILRFLDAER
            40        50        60        70        80        90   

            120       130       140       150       160       170  
pF1KB3 NFSLTKNSVRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKHYNICAVVGNSGILT
       . :..:.: . :...::   ... ...::....::::.:::. :.... :::::::::: 
CCDS47 DVSVVKSSFKPGDVIHY-VLDRRRTLNISHDLHSLLPEVSPMKNRRFKTCAVVGNSGILL
           100       110        120       130       140       150  

            180       190       200       210       220       230  
pF1KB3 GSQCGQEIDKSDFVFRCNFAPTEAFQRDVGRKTNLTTFNPSILEKYYNNLLTIQDRNNFF
        :.::.:::. .::.:                                            
CCDS47 DSECGKEIDSHNFVIR                                            
            160                                                    




380 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:32:51 2016 done: Fri Nov  4 02:32:51 2016
 Total Scan time:  1.820 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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