GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:32:16

Sequence gi568815586f:117916828_118131275 : 214448 bp : 45.71% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6078   6154   77  2  2   51   94    93 0.676   6.76
 1.02 Intr +   9804   9962  159  0  0   68   68    50 0.038   0.10
 1.03 Intr +  40341  40416   76  0  1  140   69   -13 0.015   1.52
 1.04 Intr +  48245  48291   47  1  2   94  100    13 0.003   0.31
 1.05 Term +  49893  50163  271  0  1  115   39   105 0.008   3.26
 1.06 PlyA +  50977  50982    6                               1.05

 2.04 PlyA -  51622  51617    6                               1.05
 2.03 Term -  52154  51985  170  0  2   80   42   220 0.147  14.64
 2.02 Intr -  61841  61605  237  0  0   50   57   105 0.020   1.19
 2.01 Init -  70601  70511   91  2  1   85   84   103 0.980  10.25
 2.00 Prom -  76296  76257   40                              -2.56

 3.00 Prom +  91421  91460   40                              -3.76
 3.01 Init + 100001 100065   65  1  2  110   62    53 0.982   5.54
 3.02 Intr + 100183 100327  145  1  1  125   21    52 0.893   2.48
 3.03 Intr + 101168 101226   59  1  2  101  103    25 0.941   2.98
 3.04 Intr + 102245 102309   65  2  2   65  100    37 0.976   0.96
 3.05 Intr + 102805 102941  137  2  2   71   84    87 0.932   6.89
 3.06 Intr + 104079 104158   80  2  2   53   60    86 0.928   0.65
 3.07 Intr + 105459 105532   74  0  2   59   99    98 0.920   7.05
 3.08 Intr + 106816 106935  120  2  0   36   67    73 0.552   0.47
 3.09 Intr + 108024 108183  160  1  1   63   81    59 0.946   1.75
 3.10 Intr + 108920 109001   82  2  1   99   80    33 0.990   3.24
 3.11 Term + 110062 110229  168  0  0  101   49   214 0.867  16.68
 3.12 PlyA + 110959 110964    6                               1.05

 4.16 PlyA - 111759 111754    6                               1.05
 4.15 Term - 117531 117369  163  2  1   90   47    87 0.990   2.21
 4.14 Intr - 118497 118387  111  2  0  102   97    67 0.995   8.49
 4.13 Intr - 119683 119511  173  1  2  111   72    90 0.674   8.44
 4.12 Intr - 121561 121461  101  2  2  107  109    36 0.968   7.43
 4.11 Intr - 126145 126014  132  2  0   95   68    94 0.989   8.72
 4.10 Intr - 126550 126306  245  0  2   45   96   131 0.559   6.74
 4.09 Intr - 135651 135483  169  1  1   65   81   116 0.433   7.60
 4.08 Intr - 151770 151550  221  2  2   32  121   301 0.177  25.75
 4.07 Intr - 154240 154225   16  2  1   83  109     0 0.177  -3.80
 4.06 Intr - 154642 154532  111  2  0   50  116    26 0.715   1.95
 4.05 Intr - 157165 156872  294  2  0   59  113   263 0.704  22.88
 4.04 Intr - 162779 162519  261  0  0  118   70   118 0.613  10.46
 4.03 Intr - 165602 165300  303  0  0  116   36   409 0.644  35.06
 4.02 Intr - 178987 178706  282  2  0   63  100   222 0.960  18.29
 4.01 Init - 186844 186766   79  1  1  103   82   163 0.991  16.45
 4.00 Prom - 188298 188259   40                              -6.76

 5.00 Prom + 198291 198330   40                              -2.16
 5.01 Init + 207252 207300   49  2  1   96   89    40 0.563   4.01
 5.02 Term + 211649 212265  617  0  2   66   48   126 0.490   1.03
 5.03 PlyA + 213079 213084    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  52149  51985  165  0  0   87   42   280 0.847  16.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:117916828_118131275|GENSCAN_predicted_peptide_1|209_aa
MVFSRSSGDIRTYSEKHELPDVHDARRKITQQPPAVTAPDGLVLGRDGPMTFTTHLCPCN
VEAQLKLSKGGLARPPFSRRFHLWGVHRRAVNLCLFLCLRLPYSLGLSSGQEDIIKSSAR
DDLLHVDIQPNLKITEKKEIPKANPRKAPIQATTGAGGPQDSLRTDEFRPWELMCQDQDE
RLSTAHAHSTTEGTPVLSAPLPPPSADAS

>gi568815586f:117916828_118131275|GENSCAN_predicted_CDS_1|630_bp
atggtcttttcacggtcatctggggacatacgaacatacagtgaaaaacatgagctgccc
gatgtacatgatgccaggagaaaaatcacccagcagccaccagcggtgacagccccagat
ggccttgttcttggcagagacggcccaatgaccttcaccacccacctctgtccctgcaat
gtggaggcacaattaaaactctccaagggtggccttgctagaccgcctttcagcaggaga
tttcacctttggggagtccacaggagagcagtaaacctctgtctgttcctgtgtctgcgg
ctgccttactcgctaggactcagttctggccaagaagatataatcaaatcatctgcaagg
gatgacctcctgcatgttgacatccagccaaatttaaaaatcacggaaaaaaaagaaata
cccaaagcgaatccgagaaaagcacccatccaggctacaacaggggcaggagggccacaa
gattcactacggactgacgagttcaggccttgggaactcatgtgccaggaccaagatgaa
cgtctcagtactgctcatgcccactccaccacagagggaacccctgttctctcagcccca
ctgcccccaccctcggcggatgccagctaa

>gi568815586f:117916828_118131275|GENSCAN_predicted_peptide_2|165_aa
MAKKEGEYGKLFEICPNDKKVTMEAFKNDNRQCKLIVQFMLELMGDCIPDRVAQHSAVIL
VTSRKKPPKNDANNKIVLRDADRKETYLSRVRVIFKLLDYVSYFLLPKLGKMSVWSEAGA
IAATVTPGARRRQQQQQQQRGEETAASRSSRRSRGSNADSTLRTR

>gi568815586f:117916828_118131275|GENSCAN_predicted_CDS_2|498_bp
atggccaagaaggagggcgaatatgggaagttgtttgaaatatgtccaaatgacaagaaa
gtgactatggaagcattcaaaaatgataaccgtcagtgcaagttaatcgtgcaatttatg
ctagaactaatgggagactgtatccctgatagggttgctcagcattctgcggtcatcctt
gttacatctaggaaaaagccacctaaaaatgatgccaacaacaaaatagtgctgagagat
gcagacagaaaagaaacgtacctatccagagtaagagtcatctttaaacttcttgattat
gtgagttactttcttttgcctaaactgggcaagatgtcggtgtggagcgaggcaggagcg
attgcagcaaccgtcacccccggagcccggcggcggcagcagcagcagcagcagcagcgc
ggggaggagacagcagccagccgcagtagccgccgcagccgcgggagcaatgcagacagc
accttgagaacgcgctaa

>gi568815586f:117916828_118131275|GENSCAN_predicted_peptide_3|384_aa
METSALKQQEQPAATKIRNLPWPAAGTDLQRFPPTPPSYPDSSVLFRAFASSHPFTPSSI
CRRRRRLSHLPLATTNLLSIYGFAYSGHFMVEKYRPQTLNDLISHQDILSTIQKFINEDR
LPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTR
TIFKKGFKLVILDEADAMTQDAQNALRREWNRCHKQLFVRVIAPLSALRPPDSLHGKVCK
KPPSLPIEVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEE
EKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILD
WMLNQDFTTAYRSILSHDLLATET

>gi568815586f:117916828_118131275|GENSCAN_predicted_CDS_3|1155_bp
atggagacctcagcactcaagcagcaggagcagcccgcggcgaccaagatcaggaacctg
ccctggcctgcagccgggaccgacctgcagaggtttcccccgacaccccccagctaccca
gactcgtccgttctgtttagggcttttgccagttctcaccctttcacccccagctccatt
tgccgaagaagaaggcggctttcgcacctgcccctggcaaccactaatctgctttctatc
tatggatttgcctattctggacatttcatggttgaaaaataccggccacagaccctgaat
gatctcatttctcatcaggacattctgagtaccattcagaagtttatcaatgaagaccga
ctgccacacttgcttctctacggtcccccagggacaggcaagacatctaccatcctagcc
tgtgcgaaacagctatataaagacaaagaatttggctccatggtcttggagctgaatgct
tcagatgaccgaggaatagacatcattcgaggaccgatcctgagctttgctagcacaagg
acaatatttaagaaaggctttaagctagtgatcttggatgaagcagacgccatgactcag
gacgcccagaatgccttgagaagagaatggaaccggtgtcataagcaactctttgttcgg
gttattgctcccttgagtgctctaaggcctccagacagtctccatggaaaagtctgcaaa
aagccgccctccctgcccatagaagtaattgagaaattcacagaaaataccagattctgc
ctcatctgtaactatctgtcaaagatcatccctgccttgcagtcccgctgcacgaggttt
cggttcggtcccctgactcctgaactcatggttccccgcctggaacatgtcgtggaagaa
gagaaagttgatataagtgaagatggaatgaaagcactagtcactctttccagtggagac
atgcgtagggctctgaacattttgcagagcaccaatatggcctttgggaaggtgacagag
gagactgtctacacctgcaccgggcacccgctcaagtcagacattgccaacatcctggac
tggatgttgaatcaagatttcaccacagcctacagaagtatcctttctcatgacctcctg
gccaccgagacctga

>gi568815586f:117916828_118131275|GENSCAN_predicted_peptide_4|886_aa
MAAGGSAPEPRVLVCLGALLAGWVAVGLEAVVIGEVHENVTLHCGNISGLRGQVTWYRNN
SEPVFLLSSNSSLRPAEPRFSLVDATSLHIESLSLGDEGIYTCQEILNVTQWFQVWLQVA
SGPYQIEVHIVATGTLPNGTLYAARGSQVDFSCNSSSRPPPVVEWWFQALNSSSESFGHN
LTVNFFSLLLISPNLQGNYTCLALNQLSKRHRKVTTELLVYYPPPSAPQCWAQMASGSFM
LQLTCRWDGGYPDPDFLWIEEPGGVIVGKSKLGVEMLSESQLSDGKKFKCVTSHIVGPES
GASCMVQIRGPSLLSEPMKTCFTGGNVTLTCQVSGAYPPAKILWLRNLTQPEVIIQPSSR
HLITQDGQNSTLTIHNCSQDLDEGYYICRADSPVGVREMEIWLSVKEPLNIGGIVGTIVS
LLLLGLAIISGLLLHYSPVFCWKVGNTSRGQNMDDVMVLVDSEEEEEEEEEEEEDAAVGE
QEGAREREELPKEIPKQDHIHRVTALVNGNIEQMGNGFQDLQEEPLLLAELKPGRPHQFD
WKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKNETKGRGS
PKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQT
GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYC
CSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTN
VIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRTRDGHVQ
FWTAPRVLSSLKHLCRKALRSFLTTYQVLALPIPKKMKEFLTYRTF

>gi568815586f:117916828_118131275|GENSCAN_predicted_CDS_4|2661_bp
atggccgcaggcggcagtgcgcccgagccccgcgtcctcgtctgcctcggggcgctcctg
gccggctgggtcgccgtaggattggaggctgttgtcattggagaagttcatgagaatgtt
actctgcactgtggcaacatctcgggactgaggggccaggtgacctggtaccggaacaac
tcggagcctgtcttccttctctcgtccaactctagcctccggccagctgagcctcgcttc
tctctagtggatgccacctccctgcacattgaatcgctgagcctgggagatgagggaatc
tacacctgccaggagatcctgaatgtgactcagtggttccaagtgtggctgcaggtggcc
agcggcccctatcagattgaggtccacatcgtggccaccggcacactccccaacggcacc
ctctacgcagccaggggctcccaggtggacttcagctgcaacagcagctccaggccacca
cccgtggttgaatggtggttccaggccctgaattccagcagcgagtcctttggccacaac
ctgacagtcaactttttctcactgttactgatatcgccaaacctccaagggaactacacc
tgtttagccttgaatcagctcagcaagagacatcgaaaggtgaccaccgagctcctggtc
tactatccccctccatcagctccccagtgctgggcacagatggcatcaggatcgttcatg
ttgcagcttacctgtcgctgggatgggggataccctgaccctgacttcctgtggatagaa
gagccaggaggtgtaatcgtggggaagtcaaagctgggggtggaaatgctgagcgagtcc
cagctgtcggatggcaagaagttcaagtgtgttacaagccacatagttgggccagagtcg
ggcgccagctgcatggtgcagatcaggggtccctcccttctctctgagcccatgaagact
tgcttcactgggggcaatgtgacgcttacatgccaggtgtctggggcctacccccctgcc
aagatcctgtggctgaggaaccttacccagcccgaggtgatcatccagcctagcagccgc
catctcattacccaggatggccagaactccaccctcactatccacaactgctcccaggac
ctggatgagggctactacatctgccgagctgacagccctgtaggggtgagggagatggaa
atctggctgagtgtgaaagaacctttaaatatcggggggattgtgggaaccattgtgagc
ctccttctgctgggactggccattatctcagggcttctgttgcattatagccctgtgttc
tgctggaaagtaggaaacacttccaggggacaaaacatggatgatgtcatggttttggtg
gattcagaagaggaagaggaggaggaggaggaggaggaggaagatgctgcagtaggggaa
caggagggagcacgtgagagagaggagttgccaaaagaaatacctaagcaggaccacatt
cacagagtgaccgccttggtgaatgggaacatagaacagatgggaaatggattccaggat
cttcaagaggaaccgctgctgctggccgaactcaagcccgggcgcccccaccagtttgat
tggaagtccagctgtgaaacctggagcgtcgccttctccccagatggctcctggtttgct
tggtctcaaggacactgcatcgtcaaactgatcccctggccgttggaggagcagttcatc
cctaaagggtttgaagccaaaagccgaagtagcaaaaatgagacgaaagggcggggcagc
ccaaaagagaagacgctggactgtggtcagattgtctgggggctggccttcagcccgtgg
ccttccccacccagcaggaagctctgggcacgccaccacccccaagtgcccgatgtctct
tgcctggttcttgctacgggactcaacgatgggcagatcaagatctgggaggtgcagaca
gggctcctgcttttgaatctttccggccaccaagatgtcgtgagagatctgagcttcaca
cccagtggcagtttgattttggtctccgcgtcacgggataagactcttcgcatctgggac
ctgaataaacacggtaaacagattcaagtgttatcgggccacctgcagtgggtttactgc
tgttccatctccccagactgcagcatgctgtgctctgcagctggagagaagtcggtcttt
ctatggagcatgaggtcctacacgttaattcggaagctagagggccatcaaagcagtgtt
gtctcttgtgacttctcccccgactctgccctgcttgtcacggcttcttacgataccaat
gtgattatgtgggacccctacaccggcgaaaggctgaggtcactccaccacacccaggtt
gaccccgccatggatgacagtgacgtccacattagctcactgagatctgtgtgcttctct
ccagaaggcttgtaccttgccacggtggcagatgacaggacaagagatggccacgtccag
ttctggacagctcctagggtcctgtcctcactgaagcacttatgccggaaagcccttcga
agtttcctaacaacttaccaagtcctagcactgccaatccccaagaaaatgaaagagttc
ctcacatacaggactttttaa

>gi568815586f:117916828_118131275|GENSCAN_predicted_peptide_5|221_aa
MGFLHVGQAGLELLTSELEKTTLKFIWNQKRACIAKTILSKKNKAGGITLPDFKLYYKAT
VTKTAWYWYQNRDIDQWNRTEPSEITPHIYNHLIFDKPIKNKKWGKDFLFNKWCWENWLT
ICRKLKLDPFLTPHTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMSKTPKAM
ATKAKIEKWDLIKELLHSKRNYHQSEQATYRMGENFCHLPI

>gi568815586f:117916828_118131275|GENSCAN_predicted_CDS_5|666_bp
atggggtttctccatgttggtcaggctggtctcgaactcctgacctcagaattggaaaaa
actactttaaagttcatatggaaccaaaaaagagcctgcattgccaagacaatcttaagc
aaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaaca
gagccctcagaaataacaccacacatctacaaccatctgatctttgacaaacctatcaaa
aacaagaaatggggaaaggatttcctatttaataaatggtgctgggaaaactggctaacc
atatgtagaaagctgaaactggatcccttccttacacctcatacaaaaattaattcaaga
tggattaaagacttaaatgttagacctaaaaccataaaaaccctagaagaaaacttaggc
aataccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatg
gcaacaaaagccaaaatagaaaaatgggatctaattaaagagcttctgcacagcaaaaga
aactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgccatctaccc
atctga