GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:30:16

Sequence gi568815584r:64976479_65202339 : 225861 bp : 44.40% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    347    473  127  2  1   76   29   120 0.427   5.58
 1.02 Intr +  10395  10619  225  2  0   71   94   136 0.453  10.68
 1.03 Intr +  13542  13631   90  2  0  -23   99   104 0.141   0.59
 1.04 Intr +  27771  27835   65  2  2   80  121    77 0.420   7.72
 1.05 Intr +  32641  32659   19  1  1   75  105   -21 0.262  -5.09
 1.06 Intr +  35138  35319  182  1  2  101   29   177 0.307  11.77
 1.07 Intr +  35839  35911   73  1  1   68   82    46 0.565   1.41
 1.08 Intr +  39147  39238   92  2  2   97   70    70 0.696   4.89
 1.09 Intr +  50975  51121  147  2  0   69   92   192 0.998  17.05
 1.10 Intr +  51220  51303   84  1  0  111  105    61 0.989   9.04
 1.11 Intr +  56132  56218   87  2  0  102  100   100 0.992  11.69
 1.12 Intr +  64312  64441  130  1  1  105   83    86 0.977  10.50
 1.13 Intr +  67833  67965  133  2  1   88  105   113 0.999  13.22
 1.14 Intr +  76760  76871  112  0  1  105   89   102 0.987  11.44
 1.15 Intr +  78097  78211  115  1  1   92   99   103 0.995  12.25
 1.16 Term +  84703  84834  132  0  0  117   44   128 0.959   9.39
 1.17 PlyA +  85834  85839    6                               1.05

 2.00 Prom +  87579  87618   40                              -5.86
 2.01 Init +  88790  88854   65  1  2   97   82    -1 0.513   0.34
 2.02 Intr +  89385  89555  171  0  0   29  100    89 0.450   3.26
 2.03 Term +  93523  93631  109  1  1   70   42   123 0.529   3.88
 2.04 PlyA +  97136  97141    6                               1.05

 3.09 PlyA -  98670  98665    6                               1.05
 3.08 Term - 100185  99998  188  1  2   68   46   266 0.993  18.05
 3.07 Intr - 101558 101435  124  2  1   80  105   151 0.923  16.16
 3.06 Intr - 117337 117230  108  1  0  115  113    58 0.941  11.48
 3.05 Intr - 125864 125826   39  2  0   42   86    90 0.192   2.62
 3.04 Intr - 133496 133361  136  1  1   48   75    32 0.166  -1.53
 3.03 Intr - 142143 142032  112  1  1   89   82    46 0.608   3.54
 3.02 Intr - 149068 148951  118  1  1   77   58    61 0.665   2.04
 3.01 Init - 154274 154158  117  2  0  110   87    45 0.562   4.85
 3.00 Prom - 157054 157015   40                              -6.66

 4.04 PlyA - 157623 157618    6                               1.05
 4.03 Term - 158579 158410  170  0  2  134   53   112 0.962  10.34
 4.02 Intr - 159400 159368   33  2  0  109   82    40 0.679   3.69
 4.01 Init - 173122 173053   70  1  1  101   35    42 0.255   1.41
 4.00 Prom - 183883 183844   40                              -1.66

 5.05 PlyA - 183943 183938    6                               1.05
 5.04 Term - 186892 186656  237  1  0   88   49   130 0.497   5.27
 5.03 Intr - 194680 194600   81  1  0   76   50    76 0.236   2.43
 5.02 Intr - 206729 206581  149  0  2   49   58    90 0.306   2.05
 5.01 Init - 209342 209294   49  2  1   31   72    77 0.267   1.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 204411 204253  159  0  0   77   47    84 0.817   1.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:64976479_65202339|GENSCAN_predicted_peptide_1|604_aa
XHTEHAPKGTTVGPAIATAEQLESCTNRQSITKTQRGWTMGLPRFSPLEFQCALLLNEAE
SYTLSAALLIMASPSSFTYYCPPSSSPVWSEPLYSLRPEHARERLQDDSVETVTSIEQMR
EEAIMDLVQEYSGQRKQQAQRTKAAECQAKVEEKIQEVFSSYKFNHLVPRKDFWIESHRL
FCQTKKEVQPLCFARPVQVAMGGTFHLKASIADLKAKDSDWLQNTVLWPGLWVTRGRLVL
QREKHFHYLKRGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELC
QSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM
HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTF
CGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR
ALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIA
QHFGSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYFLQKPVPGFEELKDETSAE
PATD

>gi568815584r:64976479_65202339|GENSCAN_predicted_CDS_1|1815_bp
nnccacactgagcatgcacccaaaggcaccactgtgggacctgccatagcaacagctgaa
cagctggagagttgcaccaataggcagtccatcaccaagactcaacgcggctggaccatg
gggctcccccgctttagcccgctcgagtttcaatgcgcgttgttgcttaacgaagcagag
tcctacacactgtctgctgctctcctgatcatggcttctccgagttctttcacctactat
tgccctccatcttcctcccccgtctggtcagagccgctgtacagtctgaggcccgagcac
gcgcgagagcggttgcaggacgactcggtggaaacagtcacgtccatagaacagatgagg
gaggaagccatcatggatctggtgcaagagtattctgggcagagaaagcagcaagcacaa
aggaccaaggcagcagaatgccaggcaaaagtagaagaaaagatccaagaggtcttcagt
tcttacaagttcaaccaccttgtaccaagaaaagatttttggatagagtcacacaggctc
ttctgccagaccaagaaagaagtgcagcctctgtgctttgcccggcctgtgcaggtggcc
atgggcggcacattccatcttaaagccagtattgctgacttgaaagccaaggacagcgac
tggctgcagaacacggtcctctggccagggctgtgggtcacacgtgggaggcttgttttg
cagagggagaagcacttccattatctgaaaagaggccttcgacaactgacagatgcctat
gagtgtctggatgccagccgcccatggctctgctattggatcctgcacagcttggaactg
ctagatgaacccatcccccagatagtggctacagatgtgtgtcagttcctggagctgtgt
cagagcccagaaggtggctttggaggaggacccggtcagtatccacaccttgcacccaca
tatgcagcagtcaatgcattgtgcatcattggcaccgaggaggcctatgacatcattaac
agagagaagcttcttcagtatttgtactccctgaagcaacctgacggctcctttctcatg
catgtcggaggtgaggtggatgtgagaagcgcatactgtgctgcctccgtagcctcgctg
accaacatcatcactccagacctctttgagggcactgctgaatggatagcaaggtgtcag
aactgggaaggtggcattggcggggtaccagggatggaagcccatggtggctataccttc
tgtggcctggccgcgctggtaatcctcaagagggaacgttccttgaacttgaagagctta
ttacaatgggtgacaagccggcagatgcgatttgaaggaggatttcagggccgctgcaac
aagctggtggatggctgctactccttctggcaggcggggctcctgcccctgctccaccgc
gcactgcacgcccaaggtgaccctgcccttagcatgagccactggatgttccatcagcag
gccctgcaggagtacatcctgatgtgctgccagtgccctgcgggggggcttctggataaa
cctggcaagtcgcgtgatttctaccacacctgctactgcctgagcggcctgtccatagcc
cagcacttcggcagcggagccatgttgcatgatgtggtcctgggtgtgcccgaaaacgct
ctgcagcccactcacccagtgtacaacattggaccagacaaggtgatccaggccactaca
tactttctacagaagccagtcccaggttttgaggagcttaaggatgagacatcggcagag
cctgcaaccgactag

>gi568815584r:64976479_65202339|GENSCAN_predicted_peptide_2|114_aa
MALITWLPRPTWPLDFQLYETMWVKQAYYLPFTTGETGWRAYVNHPRFPSCQVVVPEPEP
VSAASKAHALPPPQASEGRAVDGTSRQETMKLSSTVHGSHGLPGCQAASRIPDE

>gi568815584r:64976479_65202339|GENSCAN_predicted_CDS_2|345_bp
atggccctgatcacatggctcccgaggcccacgtggcctctggattttcagttatatgag
acaatgtgggtgaagcaggcgtattacctgccttttacaactggagaaacaggttggaga
gcttacgtaaatcacccaaggtttcccagctgtcaagtggtggtgcctgagcccgagccc
gtatctgctgcctccaaagcccatgcccttccaccaccgcaggcctctgaaggaagagct
gttgatggcaccagcagacaggaaacaatgaagctctcaagcactgtgcatgggagccat
gggctgccgggctgccaggctgccagccggattccggatgagtga

>gi568815584r:64976479_65202339|GENSCAN_predicted_peptide_3|313_aa
MPGRNLMVLKCGALPLLLSRSLLLPSKTCFAYPLPLAIILWLCDVPPPPLPSTMIVFPEA
SPEAQQMPASRVLYSLQNRQLAREGRPDRLEEQTSSSSCQRPKDTVFLGPLTKPARRYQV
LWMNGGLQGRSELDDHQHIHDSGHEHLEERTEPQISPATNQEMSDNDDIEVESDADKRAH
HNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDD
LKRQNALLEQQVRALEKARSSAQLQTNYPSSDNSLYTNAKGSTISAFDGGSDSSSESEPE
EPQSRKKLRMEAS

>gi568815584r:64976479_65202339|GENSCAN_predicted_CDS_3|942_bp
atgcctggcagaaatctgatggttttaaagtgtggggcacttcccctcttgctgtctcgc
tccctcctgctgccctctaagacatgctttgcctaccctttaccattggccattattctc
tggctatgcgatgtgcctcctcctcctttgccttccactatgattgtgtttcctgaggcc
tctccagaagcccagcagatgccagcatcacgtgtcctgtacagcttgcagaaccgtcag
ctagccagagagggtcggcctgaccgactagaagaacagacatcttccagcagctgtcag
cgtccaaaggacactgtgttccttggacctcttaccaaaccagccaggagatatcaagtg
ctatggatgaatggagggcttcaaggaaggtctgagctagatgaccatcaacatatacat
gacagtggacatgaacatctagaggaaagaactgaaccccaaatatctccagcaaccaat
caggaaatgagcgataacgatgacatcgaggtggagagcgacgctgacaaacgggctcat
cataatgcactggaacgaaaacgtagggaccacatcaaagacagctttcacagtttgcgg
gactcagtcccatcactccaaggagagaaggcatcccgggcccaaatcctagacaaagcc
acagaatatatccagtatatgcgaaggaaaaaccacacacaccagcaagatattgacgac
ctcaagcggcagaatgctcttctggagcagcaagtccgtgcactggagaaggcgaggtca
agtgcccaactgcagaccaactacccctcctcagacaacagcctctacaccaacgccaag
ggcagcaccatctctgccttcgatgggggctcggactccagctcggagtctgagcctgaa
gagccccaaagcaggaagaagctccggatggaggccagctaa

>gi568815584r:64976479_65202339|GENSCAN_predicted_peptide_4|90_aa
MRAAYTVYCTNPEVAMCMHFSVNENLLSVLEEMGDHVVLDPETTSAYLQEAECNLSVMNT
GMKMSVPSNPQRFSYFSVLGTVGFSSGRHD

>gi568815584r:64976479_65202339|GENSCAN_predicted_CDS_4|273_bp
atgagggctgcatatactgtgtactgcacaaatccagaagttgccatgtgcatgcacttc
agtgtaaatgagaacctgctgagtgtcctggaggaaatgggagaccatgtggtcctggac
ccagaaactaccagtgcttacctccaagaagcagaatgtaatctgagtgtaatgaacaca
ggcatgaagatgtctgtgccttccaacccacagaggttctcctacttcagtgtgctgggg
actgtgggattctcatcaggcagacacgactga

>gi568815584r:64976479_65202339|GENSCAN_predicted_peptide_5|171_aa
MGIRSNRYWMVTTDIEGVENIFDKIQHPFMMKTLNKLGIEGMNLNTIYIKPIAIIILNSE
KLKAFPPHCPLLEVSALLPLAFTSCRQDAALSEKKYTFSSSFPINWILEFSKLVHIYGQG
QISFTPERSTPNRKWGMLAGSSPTHRQVALVKGLLHLSFSPFFQSFSYRTN

>gi568815584r:64976479_65202339|GENSCAN_predicted_CDS_5|516_bp
atgggaatcagatcgaacaggtactggatggtaaccaccgacatcgagggtgtggaaaac
atatttgacaaaattcaacatcctttcatgatgaaaactctcaacaaattaggtatagaa
ggaatgaacctcaacacaatatacattaaacccatagctatcattatactcaacagtgaa
aaattgaaagcctttcctccccactgccccctcctggaagtcagcgcactgctgccgctg
gcattcacatcgtgtcggcaggacgccgcgttgtcagagaaaaaatataccttctcatct
tccttcccaatcaactggattctggaattctccaagttggtgcacatctacgggcaggga
cagatcagcttcaccccagaaagatcaaccccaaacaggaaatggggaatgctggctggg
tcttcccctacacatcgtcaggtggctctggtcaaaggtctacttcacctttccttctct
cccttcttccagtccttctcctatcgaaccaactga