GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:27:33

Sequence gi568815597f:92733388_92941862 : 208475 bp : 40.14% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   3028   3151  124  1  1   84   42   105 0.245   2.38
 1.02 PlyA +   3252   3257    6                               1.05

 2.00 Prom +   9413   9452   40                              -2.45
 2.01 Init +  22444  22569  126  0  0   96   42    97 0.788   6.11
 2.02 Intr +  44208  44316  109  2  1   78  100    52 0.044   4.34
 2.03 Intr +  44883  45017  135  1  0   37   61   111 0.280   2.92
 2.04 Term +  45156  45325  170  1  2   44   42    99 0.823  -2.04
 2.05 PlyA +  46373  46378    6                               1.05

 3.04 PlyA -  46576  46571    6                               1.05
 3.03 Term -  51296  50917  380  0  2   31   41   228 0.566   6.37
 3.02 Intr -  52216  52077  140  0  2   76   -4   166 0.881   5.39
 3.01 Init -  59900  59863   38  2  2   39  115    65 0.407   3.84
 3.00 Prom -  60015  59976   40                             -11.34

 4.00 Prom +  60135  60174   40                              -5.85
 4.01 Init +  61443  61700  258  2  0   90   33   191 0.785  10.98
 4.02 Intr +  85118  85166   49  1  1   95  105    51 0.027   4.83
 4.03 Intr + 100158 100273  116  1  2   76  111    86 0.956   8.95
 4.04 Intr + 101392 101526  135  0  0   67   75    97 0.973   6.14
 4.05 Intr + 102803 103005  203  1  2   40  110   265 0.990  21.06
 4.06 Intr + 104069 104246  178  2  1   17   53   226 0.980  11.00
 4.07 Intr + 107164 107252   89  0  2   91   87   168 0.743  14.85
 4.08 Intr + 107283 107384  102  0  0   57   41   122 0.634   2.77
 4.09 Term + 108379 108478  100  1  1   87   40   174 0.981   9.12
 4.10 PlyA + 108515 108520    6                               1.05

 5.05 PlyA - 108800 108795    6                               1.05
 5.04 Term - 110808 109996  813  0  0   39   32   504 0.989  32.07
 5.03 Intr - 113972 113796  177  2  0   81  121    17 0.847   3.49
 5.02 Intr - 117568 117461  108  1  0   85   80    68 0.644   5.26
 5.01 Init - 120084 120043   42  0  0   74   46    10 0.144  -4.13
 5.00 Prom - 124256 124217   40                              -2.95

 6.00 Prom + 125495 125534   40                              -6.85
 6.01 Init + 137407 137450   44  0  2   57   42    65 0.481  -1.26
 6.02 Intr + 139525 139699  175  1  1   64   60   141 0.724   7.92
 6.03 Intr + 142952 143045   94  1  1   61   76    54 0.207   0.12
 6.04 Term + 159447 160174  728  1  2  -19   43   416 0.006  19.05
 6.05 PlyA + 160440 160445    6                               1.05

 7.00 Prom + 160571 160610   40                              -6.15
 7.01 Sngl + 160664 161374  711  1  0   49   42   287 0.878  16.17
 7.02 PlyA + 161377 161382    6                               1.05

 8.00 Prom + 163796 163835   40                              -3.65
 8.01 Init + 168404 168478   75  1  0   74   41    57 0.452   0.74
 8.02 Intr + 169452 169593  142  2  1   61   89    83 0.233   4.71
 8.03 Intr + 187866 188019  154  1  1   67   47   108 0.541   2.81
 8.04 Intr + 188150 188289  140  2  2   11   82   109 0.818   1.79
 8.05 Term + 191043 191182  140  1  2   63   49    96 0.696   0.34
 8.06 PlyA + 196592 196597    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  84229  84117  113  2  2   83   43   105 0.865   3.24
S.002 Intr -  85060  84932  129  2  0   46  109    91 0.853   6.75
S.003 Sngl + 159518 160174  657  1  0   59   43   328 0.832  21.32


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_1|41_aa
XLARSSKSSGLNCDGEDGERAGVDSVVDEDVVCNEVDGLAT

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_1|126_bp
nntttagccaggagttctaagtcgtctggactcaactgtgatggggaagatggtgaaagg
gctggtgttgatagtgtggtagatgaggatgtggtatgtaatgaagtagatggacttgcc
acctga

>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_2|179_aa
MARRAGCQYSPSTWYKELKLPSYKGQSPQLSLSQYFADLTAITTMKKFKRYNPIRRRQQW
RTGGNKFLYNGKQTVDFQDSSKGSGTARTKSGRGTKRKEQVNAEQLESQISSKLLSGPTL
NVADTDNQTSTLQAENWKILSGKYDWDKRKDKYSGDSLKQSTQINYFNLGYTLELSWQL

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_2|540_bp
atggcgaggagagctggctgccaatattcaccgagcacttggtacaaagagctgaagttg
ccctcatacaaaggccagtcccctcaactgagtctcagccagtattttgctgacttgact
gccattacaactatgaagaaatttaaaaggtataaccccataaggaggagacaacaatgg
aggacaggtggcaacaagtttctgtataatggaaagcagacagtggacttccaagattcc
tcaaaaggctcaggaactgccagaacaaagagtggaagggggactaaaagaaaggagcaa
gtgaatgctgaacagttagaatcccagatttcttccaagctgctgagtggccccaccctc
aatgtggcagatactgacaaccagacctcaactctccaagcagaaaactggaagatactc
tctggaaaatatgactgggacaaaaggaaagataaatacagtggagacagcctcaaacaa
tccacccagatcaattatttcaatcttggctacacactggaattatcttggcagctttaa

>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_3|185_aa
MIDEKRFHSAQLCSLHKPNAKTRVRVHYNYKCHLRVDYCFCECPKATSGGARGCLPKHAR
PKFPALASSPVAAAAARSPPSRGRWGRNSSAGLTVASQGGGGTEQLRGHVLVNPVEDTDP
APHPRGQKSVPFGDLRGESTRPPDLQSWRLYLASGILRMACLQAADGQDRCARSRMNLRR
VCSHS

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_3|558_bp
atgatagatgaaaagcgcttccacagtgcccagctatgtagtctgcataaacccaatgcg
aagacacgtgtaagagtacattacaattacaagtgtcatttacgcgttgattattgtttt
tgcgagtgccctaaggccacctctgggggagctcggggctgccttccgaagcatgcgcgg
cctaagttccctgcactcgcttcctcgcctgtcgccgccgccgccgcccgcagccctcct
tctcgtgggcgctggggaagaaactcgtcggcgggtctaactgtggcgtcccagggcggt
ggagggacggagcagcttcgggggcacgtcctcgtaaatcccgtggaggacactgaccct
gcaccccaccctcgaggccagaagtcggttccctttggggacctgaggggcgagagcact
cgcccccctgacttgcaaagttggcgtctttacttggcctccgggattctgcgcatggcg
tgtctccaggctgctgatgggcaagacagatgtgccaggtccagaatgaacttgagaaga
gtttgtagccattcctga

>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_4|409_aa
MCEQLCEGKELRPPINIQDQLDSHANEPPQKQIFQPQSSLQITSVPAHIRLNLMKNQKSE
PVSKLLLNSYYIETVNAPLHSSLGNRKYSFIFWQLAGHTPPSEGKTDYYARKRLVIQDKN
KYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG
LLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGA
LKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQ
FSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVKKKRKQVGNGSHVGQTVGVIV
QTRSLALRDVAEAKGTRWNRPKMSLAQKKDRVAQKKASFLRAQERAAES

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_4|1230_bp
atgtgtgaacagctctgtgaaggaaaagaactaaggcctcccatcaacattcaggaccaa
cttgacagccatgccaatgagccacctcaaaagcaaatctttcagccccagtcaagcctt
cagattacttcagtaccagctcacatcagactgaatctcatgaaaaaccaaaagtcagaa
ccagtcagcaagctgctgctaaattcctattacatagaaactgtgaatgcaccattgcat
tctagcctaggcaacagaaaatacagcttcatcttctggcagcttgctggccacactcct
ccttctgagggtaaaactgattattatgctcggaaacgcttggtgatacaagataaaaat
aaatacaacacacccaaatacaggatgatagttcgtgtgacaaacagagatatcatttgt
cagattgcttatgcccgtatagagggggatatgatagtctgcgcagcgtatgcacacgaa
ctgccaaaatatggtgtgaaggttggcctgacaaattatgctgcagcatattgtactggc
ctgctgctggcccgcaggcttctcaataggtttggcatggacaagatctatgaaggccaa
gtggaggtgactggtgatgaatacaatgtggaaagcattgatggtcagccaggtgccttc
acctgctatttggatgcaggccttgccagaactaccactggcaataaagtttttggtgcc
ctgaagggagctgtggatggaggcttgtctatccctcacagtaccaaacgattccctggt
tatgattctgaaagcaaggaatttaatgcagaagtacatcggaagcacatcatgggccag
aatgttgcagattacatgcgctacttaatggaagaagatgaagatgcttacaagaaacag
ttctctcaatacataaagaacagcgtaactccagacatgatggaggagatgtataagaaa
gctcatgctgctatacgagagaatccagtctatgaaaagaagcccaagaaagaagttaaa
aagaagagaaaacaggttgggaatggttcccacgtggggcagactgttggtgtaattgtg
caaactcgatcactagctctgcgtgatgtggcagaagcgaagggaaccaggtggaaccgt
cccaaaatgtcccttgctcagaagaaggatcgggtagctcaaaagaaggcaagcttcctc
agagctcaggagcgggctgctgagagctaa

>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_5|379_aa
MEKSGANLIGFPLKCDKYKTGVIDGPACNSLCVTETLYFGKCLSTKPNNQMYLGIWDNLP
GVVKCQMEQALHLDFGTELEPRKEIVLFDKPTRGTTVQKFKEMVYSLFKAKLGDQGNLSE
LVNLILTVADGDKDGQVSLGEAKSAWALLQLNEFLLMVILQDKEHTPKLMGFCGDLYVME
SVEYTSLYGISLPWVIELFIPSGFRRSMDQLFTPSWPRKAKIAIGLLEFVEDVFHGPYGN
FLMCDTSAKNLGYNDKYDLKMVDMRKIVPETNLKELIKDRHCESDLDCVYGTDCRTSCDQ
STMKCTSEVIQPNLAKACQLLKDYLLRGAPSEIREELEKQLYSCIALKVTANQMEMEHSL
ILNNLKTLLWKKISYTNDS

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_5|1140_bp
atggagaaatctggggccaatctgattggtttccccttaaagtgtgacaagtacaagact
ggagttattgatgggcctgcatgtaacagcctttgtgttacagaaactctttactttgga
aaatgtttatccaccaagcccaacaatcagatgtatttagggatttgggataatctacca
ggtgttgtgaaatgtcaaatggaacaagcgcttcatcttgattttggaactgaattggaa
ccaagaaaagaaatagtgctatttgataagccaactagaggaactactgtacaaaaattt
aaagaaatggtctatagtctctttaaggcaaaattgggtgaccaaggaaacctctctgaa
ctggttaatctcatcttgacggtggctgatggagacaaagatggccaggtttccttggga
gaagcaaagtcggcatgggcacttcttcaactgaatgaatttcttctcatggtgatactt
caagataaagaacatacccccaaattaatgggattctgtggtgacctctatgtgatggaa
agtgttgaatatacctctctttatggaataagccttccttgggtcattgaactttttatt
ccatctgggttcagaagaagcatggatcagctgttcacaccatcatggccaagaaaggcc
aaaatagccataggacttctagaatttgtggaagatgttttccatggcccctacggaaat
ttcctcatgtgcgatactagtgccaaaaacctaggatataatgataagtatgatttgaaa
atggtggatatgagaaaaattgtgccagagacaaacctgaaagaacttattaaggatcgt
cactgtgagtctgatttggactgtgtctatggcacagattgtagaactagctgtgatcag
agtacaatgaagtgtacttcagaagtgatacaaccaaacttggcaaaagcttgtcagtta
ctcaaagactacctactgcgtggtgctccaagtgaaattcgtgaagaattagaaaagcag
ctttattcttgtattgctctcaaagtcacagcaaatcaaatggaaatggaacattctttg
atactaaataacctaaaaacattattgtggaagaaaatttcctacactaatgactcttag

>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_6|346_aa
MDRGKGGNLLPLTGQAPGIGKYPNRITGCMHEVPLVFHKASADFLSPVGAFRQHKVSASQ
IPAHAQNQQIPPRVEYCTYIIQLPTKTTNQEKKRYFIRTYEKRASRELCDECTSLSSRFD
QLEERVSVMEDQMNEMKPGETFREKRIERNEQSLQEICDYVKRPNLHLIGVTESDGENGT
KLENTLQDIIEENFPKLARQANIQIQEIQRTPQRYSSRRATPRHIIVRVTKVEMKEKMLR
AAREKGQVTHKGKPIRLTADLSAETLQARREWGPIFNMLKEKNFQPRISYPAKLSFISEG
EIKSFTDKQMLRDFVTIRPALKELLKEALNMERNNRYQPLQKHAKL

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_6|1041_bp
atggatcggggtaaaggtgggaatctgcttccactgactggtcaagccccgggaattggc
aaatatcccaacaggataactggctgtatgcatgaggttcccctggttttccacaaagcc
tctgctgatttcttgtccccagtaggggctttccgccaacataaggtttctgcttctcag
atccctgcccatgcccagaatcagcaaattccccccagggtagaatactgcacatatata
atccagcttccaacaaaaaccactaaccaggaaaagaaaagatatttcatccgcacatat
gagaagcgagcctcacgagaactatgtgatgaatgcacaagtctcagtagccgattcgat
caactggaagaaagggtatcagtgatggaagatcaaatgaatgaaatgaagccaggagag
acgtttagagaaaaaagaatagaaagaaatgaacaaagcctccaagaaatatgtgactat
gtgaaaagaccaaatctacatctgattggtgtaactgaaagtgacggggagaatggaacc
aagttggaaaacactctgcaggatattatcgaggagaacttccccaagctagcaaggcag
gccaacattcagattcaggaaatacagagaacgccacaaagatactcctcgagaagagca
actccaagacacataattgtcagagtgaccaaagttgaaatgaaggaaaaaatgttaagg
gcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcggat
ctctcggcagaaactctacaagccagaagagagtgggggccaatattcaacatgcttaaa
gaaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaagga
gaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccatcaggcctgcc
ctaaaagagctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactg
caaaaacatgccaaactgtaa

>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_7|236_aa
MGDFNTPLSTLDRSMRQKVNKDIQELNSALHQADLIGIYRTLHPKSTEYTFFSAPHHTYS
KTDHVVGSKALLIKWKTTEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLNNLFLNDYWV
HNEMKAEIKMFFETNKNKDTTYQNLWNTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKLEQTHSKASRRQEITKITAELKEIETQKTLQKFNESRSWFFEKINKIDRPLA

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_7|711_bp
atgggagactttaacaccccactgtcaacattagacagatcaatgagacagaaagtcaac
aaggatatccaggaattgaactcagctctgcaccaagcggacctaataggcatctacaga
actctccaccccaaatcaacagaatatacattcttttcagcaccacaccacacctattcc
aaaactgaccacgtagttggaagtaaagcactcctcatcaaatggaaaacaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaaccgctcaactacatggaaactgaacaatctgttcctgaatgactactgggta
cataatgaaatgaaggcagaaataaagatgttctttgaaaccaacaagaacaaagataca
acataccagaatctctggaacacattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagagaagctagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcacagcagagctgaaggaaatagagacacaaaaaacccttcaaaaattcaatgaatcc
aggagctggttttttgaaaagatcaacaaaatagatagaccgctagcttga

>gi568815597f:92733388_92941862|GENSCAN_predicted_peptide_8|216_aa
MTIYPKERGVSSSDSRELVQFQGSRLFSLKCGLAIVLVLCEDDDHEGLLVGHLADVTWSV
PECFIISSGETFRVYNCIEKAIVFWFLIAIETHSGWTNCERCPRKGEPKGENTKMTISDQ
IQRNAFEDRRTVGPEEPGSVGEQLCVSLGQDISGVEVLSGERPAPRSWAVGRHYITRTDQ
GELKKEGVNAGIEDKDKTVYLEEGVRGHLASSGQGP

>gi568815597f:92733388_92941862|GENSCAN_predicted_CDS_8|651_bp
atgactatataccccaaggagaggggtgtcagcagctcagactctagggagctagtccag
ttccagggaagcaggttattttcattaaaatgtggtttagctattgttttggttctttgt
gaggatgatgaccacgaggggcttctagtcggccatcttgctgatgtcacttggagcgtg
cctgagtgttttattatttcctcaggagagacattcagagtttataactgtattgagaaa
gcaattgtgttttggtttttaattgctatagaaacacactcaggatggacaaattgtgaa
cgatgtcccagaaaaggagagcccaaaggagagaacacaaagatgaccatatcagaccaa
atccagaggaatgcttttgaggacaggaggacggtgggacctgaggaacctggctcagtg
ggagagcaactgtgcgtcagtcttgggcaggacatctctggagtggaagtactgtctgga
gaaagaccagctcctcggagttgggcagtagggcgccactatataacccgcacggatcaa
ggggaactgaaaaaagagggagtgaatgcgggaatagaagacaaagacaaaacagtatat
ttggaagaaggagtcagggggcaccttgcctctagtggacaagggccctga