Result of FASTA (omim) for pF1KB3441
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3441, 340 aa
  1>>>pF1KB3441 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7154+/-0.000569; mu= 9.0991+/- 0.034
 mean_var=151.1202+/-31.058, 0's: 0 Z-trim(110.8): 484  B-trim: 279 in 2/48
 Lambda= 0.104331
 statistics sampled from 18597 (19217) to 18597 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.576), E-opt: 0.2 (0.225), width:  16
 Scan time:  7.470

The best scores are:                                      opt bits E(85289)
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2322 362.0   1e-99
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2322 362.0   1e-99
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340) 2322 362.0   1e-99
NP_001269468 (OMIM: 139380,613065,616973) guanine  ( 340) 2322 362.0   1e-99
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2322 362.0   1e-99
NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340) 2155 336.9 3.8e-92
XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2152 336.5 5.1e-92
XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2152 336.5 5.1e-92
NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340) 2152 336.5 5.1e-92
NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340) 2027 317.6 2.4e-86
NP_001284500 (OMIM: 139130,145500,617024) guanine  ( 339) 2002 313.9 3.2e-85
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360) 1803 283.9 3.5e-76
NP_001269467 (OMIM: 139380,613065,616973) guanine  ( 240) 1664 262.9 5.2e-70
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 1271 203.9 4.4e-52
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 1271 203.9 4.7e-52
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 1217 195.7 1.2e-49
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 1193 192.1 1.3e-48
XP_016877356 (OMIM: 604447) PREDICTED: guanine nuc ( 212)  826 136.7 4.5e-32
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334)  419 75.6 1.7e-13
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334)  419 75.6 1.7e-13
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334)  419 75.6 1.7e-13
NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521)  417 75.5 2.8e-13
NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522)  417 75.5 2.9e-13
NP_008882 (OMIM: 601787) transcription initiation  ( 800)  408 74.3 9.8e-13
NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  385 70.4 5.2e-12
NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  385 70.4 5.2e-12
NP_006089 (OMIM: 176981) receptor of activated pro ( 317)  363 67.1 5.6e-11
NP_001290177 (OMIM: 609540) WD repeat-containing p ( 212)  344 64.1 3.1e-10
NP_079510 (OMIM: 609540) WD repeat-containing prot ( 305)  344 64.3   4e-10
NP_001290176 (OMIM: 609540) WD repeat-containing p ( 305)  344 64.3   4e-10
XP_011520396 (OMIM: 609540) PREDICTED: WD repeat-c ( 305)  344 64.3   4e-10
NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436)  343 64.3 5.7e-10
NP_758440 (OMIM: 614784,615973) POC1 centriolar pr ( 478)  343 64.3   6e-10
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655)  335 63.2 1.7e-09
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655)  335 63.2 1.7e-09
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655)  335 63.2 1.7e-09
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658)  335 63.2 1.7e-09
XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672)  335 63.3 1.8e-09
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672)  335 63.3 1.8e-09
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672)  335 63.3 1.8e-09
XP_016878349 (OMIM: 602703,616212) PREDICTED: kata ( 675)  335 63.3 1.8e-09
XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675)  335 63.3 1.8e-09
XP_006721185 (OMIM: 602703,616212) PREDICTED: kata ( 675)  335 63.3 1.8e-09
XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675)  335 63.3 1.8e-09
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357)  329 62.1 2.1e-09
NP_387449 (OMIM: 605651) F-box/WD repeat-containin ( 508)  330 62.4 2.4e-09
XP_016864770 (OMIM: 605651) PREDICTED: F-box/WD re ( 510)  330 62.4 2.5e-09
XP_016864769 (OMIM: 605651) PREDICTED: F-box/WD re ( 510)  330 62.4 2.5e-09
XP_005265915 (OMIM: 605651) PREDICTED: F-box/WD re ( 510)  330 62.4 2.5e-09
XP_005265914 (OMIM: 605651) PREDICTED: F-box/WD re ( 515)  330 62.4 2.5e-09


>>XP_016856550 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 2322 init1: 2322 opt: 2322  Z-score: 1911.2  bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       ::::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>XP_016856548 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 2322 init1: 2322 opt: 2322  Z-score: 1911.2  bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       ::::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>NP_002065 (OMIM: 139380,613065,616973) guanine nucleot  (340 aa)
 initn: 2322 init1: 2322 opt: 2322  Z-score: 1911.2  bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       ::::::::::::::::::::::::::::::::::::::::
NP_002 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>NP_001269468 (OMIM: 139380,613065,616973) guanine nucl  (340 aa)
 initn: 2322 init1: 2322 opt: 2322  Z-score: 1911.2  bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       ::::::::::::::::::::::::::::::::::::::::
NP_001 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>XP_016856549 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 2322 init1: 2322 opt: 2322  Z-score: 1911.2  bits: 362.0 E(85289): 1e-99
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       ::::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>NP_005264 (OMIM: 139390) guanine nucleotide-binding pr  (340 aa)
 initn: 2155 init1: 2155 opt: 2155  Z-score: 1775.4  bits: 336.9 E(85289): 3.8e-92
Smith-Waterman score: 2155; 90.3% identity (97.1% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.::::::::::.:.::.::: ..:::::::::::::::::::::::
NP_005 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
NP_005 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::.:::::::::::::: :::::::::::::::::.:::::::::::::::::::. :
NP_005 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       .::.::::::::::: : ::::::::: ::::::..:::::: ::::::::. ::::: :
NP_005 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       :.:::::::::::::::::::. :::::::::::::.::.:::::::::::::::.:::.
NP_005 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       :.::::::::::::::::::::::::::::::::::::::
NP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>XP_006713784 (OMIM: 610863,615185) PREDICTED: guanine   (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1773.0  bits: 336.5 E(85289): 5.1e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_006 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_006 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_006 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_006 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_006 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       :.::::::::::::::::::::::::::::::::::.:::
XP_006 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
              310       320       330       340

>>XP_005247749 (OMIM: 610863,615185) PREDICTED: guanine   (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1773.0  bits: 336.5 E(85289): 5.1e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_005 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_005 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_005 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_005 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_005 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       :.::::::::::::::::::::::::::::::::::.:::
XP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
              310       320       330       340

>>NP_067642 (OMIM: 610863,615185) guanine nucleotide-bin  (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1773.0  bits: 336.5 E(85289): 5.1e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
NP_067 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_067 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
NP_067 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
NP_067 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
NP_067 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       :.::::::::::::::::::::::::::::::::::.:::
NP_067 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
              310       320       330       340

>>NP_002066 (OMIM: 139130,145500,617024) guanine nucleot  (340 aa)
 initn: 2027 init1: 2027 opt: 2027  Z-score: 1671.3  bits: 317.6 E(85289): 2.4e-86
Smith-Waterman score: 2027; 83.2% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB3 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
       :.:..::::::::::.:: ::::::::.::........ :::.:::::::::::::::::
NP_002 MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::.:::.::::::::::::.:::::::::::::::::::::::::::::.::::::::.
NP_002 MHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
       :::::::.:::::.:::::..::::::::::::::.:::::::::::::::::::: :.:
NP_002 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
       .::::: :::...::  ::.:::::::::::::::: :::::::::::::::::::::.:
NP_002 VGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
       . ::::::.::::::::::::. .::..::::::::.:: :::::.::::::::::::..
NP_002 ICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSM
              250       260       270       280       290       300

              310       320       330       340
pF1KB3 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
       :..:.:.:.:::::::::::: ::::::::::::::::::
NP_002 KSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN
              310       320       330       340




340 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:25:23 2016 done: Fri Nov  4 02:25:24 2016
 Total Scan time:  7.470 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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