GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:23:19

Sequence gi568815595f:68535705_68737024 : 201320 bp : 38.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3052   3176  125  2  2   58   89    82 0.422   4.68
 1.02 Term +  28658  29065  408  1  0   52   42   208 0.460   6.83
 1.03 PlyA +  29794  29799    6                               1.05

 2.00 Prom +  35651  35690   40                              -6.05
 2.01 Sngl +  36372  36659  288  2  0   58   42   225 0.490  10.24
 2.02 PlyA +  36665  36670    6                               1.05

 3.08 PlyA -  42326  42321    6                               1.05
 3.07 Term -  43473  43060  414  0  0   62   47   197 0.587   7.28
 3.06 Intr -  47314  46998  317  2  2   22   86   100 0.032  -1.94
 3.05 Intr -  67351  67172  180  2  0   71   95    86 0.447   6.52
 3.04 Intr -  75788  75505  284  1  2  101    7   161 0.195   5.44
 3.03 Intr -  77500  77379  122  1  2   25   27   125 0.564  -1.53
 3.02 Intr -  83254  83141  114  1  0  -22   99   132 0.652   3.02
 3.01 Init -  84753  84739   15  0  0   99   80     7 0.718   1.48
 3.00 Prom -  85328  85289   40                              -7.35

 4.04 PlyA -  86032  86027    6                               1.05
 4.03 Term -  89383  89093  291  1  0   27   42   218 0.697   5.46
 4.02 Intr -  98533  98240  294  1  0   34   54   323 0.091  19.78
 4.01 Init -  98732  98679   54  2  0   48   23    42 0.566  -4.96
 4.00 Prom -  99267  99228   40                             -11.64

 5.00 Prom +  99412  99451   40                              -9.15
 5.01 Init + 100001 100691  691  1  1   94   98   942 0.661  91.06
 5.02 Term + 100887 101323  437  1  2  -88   39   609 0.756  32.86
 5.03 PlyA + 101517 101522    6                               1.05

 6.03 PlyA - 101852 101847    6                               1.05
 6.02 Term - 108330 107980  351  0  0   -8   48   232 0.394   3.10
 6.01 Init - 108843 108718  126  0  0   76   70    86 0.487   4.33
 6.00 Prom - 114815 114776   40                              -3.65

 7.00 Prom + 121833 121872   40                              -1.25
 7.01 Init + 125432 125513   82  1  1   78  105    51 0.927   6.98
 7.02 Term + 132921 133045  125  1  2   25   41   158 0.691   2.37
 7.03 PlyA + 133168 133173    6                               1.05

 8.00 Prom + 135462 135501   40                              -4.85
 8.01 Init + 137167 137189   23  0  2   84  127    17 0.555   4.45
 8.02 Intr + 139232 139275   44  2  2  121   80    11 0.097   0.57
 8.03 Term + 168362 168588  227  0  2   57   42   191 0.304   7.36
 8.04 PlyA + 169409 169414    6                               1.05

 9.00 Prom + 173626 173665   40                              -3.75
 9.01 Init + 181005 181076   72  2  0   59  115    72 0.727   8.12
 9.02 Intr + 182792 182867   76  1  1   57  105    26 0.604  -0.63
 9.03 Intr + 189550 189761  212  2  2   90   96    68 0.449   5.51
 9.04 Term + 191781 191984  204  2  0   93   34   110 0.644   2.49
 9.05 PlyA + 193555 193560    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_1|177_aa
XSIVIGKWWCEMEPCLEGEECKTLPDNSGWMCATGNKIKTTRTKGSLDSKLKIPERFLHF
RAYETFHEASASYQPAKKREQAQRTTPEMLKNRLGSGIKYSCPHSTKQNSGLWPHLTVGK
AGLKKKKSPLVHLEGKRDSLLNAHSVPTITSSPGYSSPESYGKPYKLAQAANKNTKA

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_1|534_bp
ncctccatagtgattgggaaatggtggtgtgagatggagccttgcctagaaggagaagaa
tgtaagacactccctgacaattctggatggatgtgcgcaacaggcaacaaaattaagacc
acgagaactaaggggtccttggattccaagctaaaaatacctgagaggtttctacatttc
agggcctatgaaaccttccacgaagcctctgcttcctatcagccagcaaagaagagagag
caagctcagaggaccactccagagatgttaaagaacaggcttggaagtggtataaaatac
agctgcccacattccactaagcagaactctggcttatggccccacctaactgtagggaaa
gctggtttaaaaaaaaaaaaaagtccacttgtacacctcgaagggaaaagagatagcttg
ctgaatgcccattcagtgcccactataacctcctctccagggtactcctctccagaaagc
tatgggaagccatataagttggctcaagctgccaataagaacaccaaagcctaa

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_2|95_aa
MSKMTEIEFRIWIGRKIIEVQENIKTQSKEAKKHNKVLQELTDKIASIEKNVTNLIELQN
TLQEFYNAVASIDRKIDQVEERISELEDDLYEIRH

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_2|288_bp
atgtctaaaatgacagaaatagaattcagaatatggataggaaggaagattatcgaagtt
caggagaacatcaaaactcaatccaaggaagctaagaaacacaataaagtactacaggag
ctgacagacaaaatagccagtatagaaaagaatgtaacaaacctgatagagctgcaaaac
acactacaagaattttacaatgcagttgcaagtattgatagaaaaatcgaccaagttgag
gaaagaatctcagagcttgaagacgacctgtatgaaataagacattag

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_3|481_aa
MATSQPVRTKQQKDEGETESNGLRICGHILTGQVKLRDLKMVQWVEARDAAKHLAIHRTA
PTTKNYPVENVNSAKVEKSHSIITNPLVALTQPVGPGVQIWQRAKKGRPGGSQVGKSDKV
RGSVGLHDEDMEKREDGCAENKKGLGHGKKEHKQGAGVEKSNGNTVNVESFELDPLNYPC
IPLLGFSLPTCYSNTAIVIVTVQGPGIAGFIQMAIVLVGMTPSGLMISKLYKELKQLNAE
NLLKLISNFSKVSVYQINVQKSQAFLHTINRQTESQITSEFPFTIASKRIKYLEMQLTRD
VKNLFRENYKPLLNKIKEDTNKWKNVPYSWIGRINIVKITILPKLADYNGLGSQKDFGSR
QASAAVDFGCATWYASLSSQTIPTQHCANHSSSGLRVLPSTATVAVITDLANMLETYPES
LQSQAFCEGHSQTKPNCEDRNKYFFNVQTPMHDHKNQEQSEKHEKTKQNKDQYQSDKIKF
Q

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_3|1446_bp
atggccaccagccagcctgtacgaacaaagcagcagaaagatgaaggtgaaacagaatcg
aacgggttgagaatttgtggtcatattctcactggtcaggttaaacttcgtgacctcaaa
atggtgcagtgggtagaggccagggatgctgctaaacatcttgcaatacacagaacagcc
cccacaacgaagaattatcccgtggaaaatgtcaatagtgccaaggttgagaaatctcac
tctattatcactaatccactggttgctctcactcagccagtgggcccaggggtgcagatc
tggcaaagggcaaagaagggcagacccggggggtcacaggtggggaagagtgacaaggtg
agaggttcagttggtctccacgatgaagacatggagaagagagaggatgggtgtgcagag
aataaaaaggggttgggtcatggcaagaaagagcacaagcaaggtgctggtgtagagaag
agcaatggaaatacagtaaatgttgaaagttttgagttggatcccttgaattatccctgt
attccactcttgggattctctctccccacatgctactctaatactgctatagttattgtg
acagtccaaggccctggaatagcaggtttcattcagatggccatcgtccttgtaggcatg
actccttcaggtctgatgatatccaaattatataaggaactcaaacaactcaatgccgaa
aatctccttaagctgataagcaacttcagcaaagtctcagtataccaaatcaacgtgcaa
aaatcacaagcattcctacacaccattaacagacaaacagagagccaaatcacgagtgaa
ttcccattcacaattgcttccaagagaataaaatacctggaaatgcaactaacaagggat
gtgaaaaacctcttcagggagaactacaaaccactgctcaacaaaataaaagaggacaca
aacaaatggaagaatgttccatactcatggataggaagaatcaatattgtgaaaataacc
atactgcccaagctggctgactacaatggccttggatctcagaaagacttcggcagcagg
caggcctcagcagctgtagactttggctgtgccacatggtatgccagcctcagcagccag
acaattccaactcagcattgtgccaaccacagcagttctgggcttagggtactccctagc
actgcaacagttgcagtgatcacagacttagcaaacatgctagagacctacccagaatct
ctgcaatcacaggcattctgtgaagggcattcccagacaaagccaaactgtgaagacaga
aataagtacttcttcaatgtgcagacacctatgcatgaccacaagaatcaagaacaatca
gagaaacatgaaaaaacaaaacaaaacaaagaccaatatcaaagtgacaaaataaagttc
cagtga

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_4|212_aa
MPADRREAKFLVDGPVGAALGITTKISRGIVEIVRDVQLIKTGDKVGASEAIRLNVSPIP
WRIIKPVSDNGSIYIPEVLYITGDTLHPLFQGVCMVPVFADWLPSCCISTPFYHQRNIVL
EILARAIRQEKKIKGIQTGIEEVKLLLFADDMTVFLENSKGSSKKLLELMNEFSKISEYK
INLHKSVALLYTNSGQAENQIKKSTPFTIAAK

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_4|639_bp
atgcctgcagacaggagagaggcaaaattcttagttgatggaccagttggagccgcatta
ggcatcaccaccaaaatctccaggggcatcgttgaaatcgtaagggatgtgcagctcatt
aagactggagacaaagtgggagccagtgaagccatacggctgaacgtctcccctattcct
tggcggatcatcaagccagtgtctgacaatggcagcatctacatccctgaagtgctttac
atcacaggggacactctgcatcctctcttccagggtgtctgcatggtgccagtgtttgca
gattggttacccagctgttgcatcagtaccccattttatcatcaacggaacatagtactg
gaaatcctagccagagcaatcagacaagagaaaaaaataaagggcatccaaactggtata
gaagaagtcaaactgttgctgtttgctgatgatatgactgtattcctagaaaactctaaa
ggctcctccaaaaagctcctagaactgatgaatgaattcagcaaaatttcagaatacaaa
attaatctacacaaatcagtagctctgctgtacaccaatagcggccaagctgagaatcaa
attaagaaatcaaccccttttacaatagctgcaaaataa

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_5|375_aa
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTDSNSGGEREI
QRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIF
QIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKEN
VLYKKQEGTPEGLYL

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_5|1128_bp
atgggtcaaagtcagagtggtggtcatggtcctggaggtggcaagaaggatgacaaggac
aagaaaaagaaatatgaacctcctgtaccaactagagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaaactgccactggtgacacctcacactcagtgccggtta
aaattactgaagttagagagaattaaagactatcttctcatggaggaagaattcattaga
aatcaggaacaaatgaaaccattagaagaaaagcaagaggaggaaagatcaaaagtggat
gatctgagggggaccccgatgtcagtaggaaccttggaagagatcattgatgacaatcat
gccatcgtgtctacatctgtgggctcagaacactacgtcagcattctttcatttgtagac
aaggatctgctggaacctggctgctcggtcctgctcaaccacaaggtgcatgccgtgata
ggggtgctgatggatgacacggatcccctggtcacagtgatgaaggtagaaaaggccccc
caggagacctatgcagatattggggggttggacaaccaaattcaggaaattaaggaatct
gtggagcttcctctcacccatcctgaatattatgaagagatgggtataaagcctcctaag
ggggtcattctctatggtccacctggcacagactccaattctggtggtgagagagaaatt
cagcgaacaatgttggaactgctgaaccagttggatggatttgattctaggggagatgtg
aaagttatcatggccacaaaccgaatagaaactttggatccagcacttatcagaccaggc
cgcattgacaggaagattgagttccccctgcctgatgaaaagacgaagaagcgcatcttt
cagattcacacaagcaggatgacgctggctgatgatgtaaccctggacgacctgatcatg
gctaaagatgacctctctggtgctgacatcaaggcaatctgtacagaagctggtctgatg
gccttaagagaacgtagaatgaaagtaacaaatgaagacttcaaaaaatctaaagaaaat
gttctttataagaaacaggaaggcacccctgaggggctgtatctctaa

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_6|158_aa
MCGPHHAIAASAHVNLATAALPLPVQVYSTCVHMDATTPHLLGTEEYKSKKTPSEGQQCQ
ILKEHQPTQMRNNQLKNSGNSKSQSVFLPPNNHTSSSAMVLNQAEMAEKTDIEFSIWIVT
KIIEIQEKVETQSKESKESNKMKQELNQTDLIELNNSL

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_6|477_bp
atgtgtggacctcaccacgctattgccgccagtgcacacgtgaacctcgccactgctgcc
ctgcccctgccagtgcaggtgtacagtacatgtgtgcatatggatgccaccaccccacat
ttgctgggcactgaagaatacaaaagcaaaaaaaccccatccgaaggacagcaatgtcaa
atactaaaggaacatcagcccacacagatgagaaataaccagctcaagaactctggcaac
tcaaaaagtcagagtgtcttcttacctccaaacaatcacactagctcttcagcaatggtt
cttaaccaggctgaaatggctgaaaagacagacattgaattcagtatctggatagtaaca
aagatcattgagattcaggagaaagttgaaacccaatccaaggaatctaaggaatccaat
aaaatgaaacaagagctcaaccaaactgatctgatagagctaaataactcactataa

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_7|68_aa
MNQYQSMAWGLGTPVLESRRRRCDGNRGCLAASYPPDAGSTPFPPPLSPSVNNQKCLQTL
PNVTWGVK

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_7|207_bp
atgaaccagtaccagtccatggcctggggattggggactcctgttctagagagtcggaga
aggagatgtgatggaaacagaggttgtttggcagcatcctacccaccagatgccggcagc
acaccctttccacccccactctccccaagtgtgaacaatcaaaaatgtctccagacattg
ccaaatgtcacctggggagtaaaatag

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_8|97_aa
MVVKSMKRSRCPQLSYLLLFSAGPAPVQGEGITKPEHQGTGNSGTTLEFCLPNAIRDIGK
GKDFMKTSKAIATKAKIDKCDLIKELLQSKINYQQSE

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_8|294_bp
atggtggtgaaatccatgaaacgatcccgctgtccacagttatcctatctcctcttgttc
tcagcaggtcctgctcctgtccaaggggaggggattacaaagcctgagcaccaagggaca
ggaaattcagggaccaccttagaattctgcctacccaatgccattcgagacataggcaaa
ggcaaggatttcatgaagacatcaaaagcaattgcaacaaaagcaaaaattgacaaatgt
gatcttattaaagagcttctgcagagcaaaataaactatcaacagagtgaatag

>gi568815595f:68535705_68737024|GENSCAN_predicted_peptide_9|187_aa
MAFLALWVVLPPQEKYFSPSYDDQRRWIYNSAHQLQRARVLPHICGVMGGHFQPATAGQL
EFQASESYEVPWVGAHRMRLLGSLDSAPCLGKCTGSPALLEFLGLEYAKLPGFPKCPSEQ
WCSDVHQIVIKGQGIYLSMKKAQEFFNILPNRQLRATGSNASRVFEFVPSLLAQISDLET
KKKHETI

>gi568815595f:68535705_68737024|GENSCAN_predicted_CDS_9|564_bp
atggcatttctagctctctgggttgttcttcctcctcaagagaaatacttcagtccaagc
tacgatgaccagaggagatggatttacaattctgcccaccagctccagagagcaagggtg
cttcctcatatctgtggtgtcatgggaggccatttccagcctgccactgctggccagctg
gaattccaagccagtgagtcttatgaggtgccatgggtgggggcccacagaatgaggctg
cttggttccctggattcagccccttgcctaggcaaatgcacaggatctcctgccttgctg
gaattcctggggctggagtatgcaaaactcccgggtttccctaaatgccccagtgagcag
tggtgctctgatgtccaccagatagttattaaaggccaaggcatttacttgtccatgaag
aaagcacaagagtttttcaacattctgccaaatcgacagctaagggcaacaggaagcaat
gcttctcgagtgtttgagtttgtcccttctttacttgctcaaatttctgacttggaaaca
aagaaaaaacatgaaacgatctag