Result of FASTA (omim) for pF1KB3406
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3406, 367 aa
  1>>>pF1KB3406 367 - 367 aa - 367 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5955+/-0.000354; mu= 15.9519+/- 0.022
 mean_var=76.3896+/-15.808, 0's: 0 Z-trim(114.7): 35  B-trim: 833 in 1/51
 Lambda= 0.146743
 statistics sampled from 24741 (24776) to 24741 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.29), width:  16
 Scan time:  7.810

The best scores are:                                      opt bits E(85289)
NP_004138 (OMIM: 603952) developmentally-regulated ( 367) 2399 517.2 2.4e-146
NP_001379 (OMIM: 602986) developmentally-regulated ( 364) 1351 295.3 1.5e-79
NP_001317073 (OMIM: 602986) developmentally-regula ( 343) 1187 260.6 3.9e-69
XP_011522006 (OMIM: 602986) PREDICTED: development ( 364) 1107 243.6 5.2e-64
XP_005256556 (OMIM: 602986) PREDICTED: development ( 385) 1107 243.7 5.4e-64
XP_005256557 (OMIM: 602986) PREDICTED: development ( 304)  789 176.3 8.2e-44
XP_016879785 (OMIM: 602986) PREDICTED: development ( 220)  737 165.2 1.3e-40
XP_016879786 (OMIM: 602986) PREDICTED: development ( 220)  737 165.2 1.3e-40
XP_011522008 (OMIM: 602986) PREDICTED: development ( 241)  493 113.5   5e-25
XP_011522009 (OMIM: 602986) PREDICTED: development ( 241)  493 113.5   5e-25
XP_005260450 (OMIM: 610919) PREDICTED: mitochondri ( 406)  250 62.2 2.3e-09
XP_011527078 (OMIM: 610919) PREDICTED: mitochondri ( 406)  250 62.2 2.3e-09
XP_016883295 (OMIM: 610919) PREDICTED: mitochondri ( 406)  250 62.2 2.3e-09
NP_056481 (OMIM: 610919) mitochondrial ribosome-as ( 406)  250 62.2 2.3e-09
XP_006723837 (OMIM: 610919) PREDICTED: mitochondri ( 422)  250 62.2 2.4e-09
XP_016883294 (OMIM: 610919) PREDICTED: mitochondri ( 434)  250 62.3 2.5e-09
NP_149098 (OMIM: 610920) GTP-binding protein 10 is ( 387)  207 53.1 1.2e-06
NP_001036182 (OMIM: 610920) GTP-binding protein 10 ( 308)  178 46.9 7.2e-05


>>NP_004138 (OMIM: 603952) developmentally-regulated GTP  (367 aa)
 initn: 2399 init1: 2399 opt: 2399  Z-score: 2748.4  bits: 517.2 E(85289): 2.4e-146
Smith-Waterman score: 2399; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:1-367)

               10        20        30        40        50        60
pF1KB3 MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED
              310       320       330       340       350       360

              
pF1KB3 VIQIVKK
       :::::::
NP_004 VIQIVKK
              

>>NP_001379 (OMIM: 602986) developmentally-regulated GTP  (364 aa)
 initn: 1375 init1: 974 opt: 1351  Z-score: 1549.4  bits: 295.3 E(85289): 1.5e-79
Smith-Waterman score: 1351; 57.6% identity (81.5% similar) in 363 aa overlap (5-367:4-364)

               10        20        30        40        50        60
pF1KB3 MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
           : ::.::: :.::::::::: .:::::::.::: : .:. :. ....  :::::: 
NP_001  MGILEKISEIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSASS-KGEGFDVM
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB3 KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
       :.::::....:::::::::.:: .... ::.:.::::::: .::::.::::.::::::::
NP_001 KSGDARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPG
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB3 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
       ::::: .:::::::::::::: ..:...::. :   .....:.:::. :::::.. ::: 
NP_001 IIEGAAQGKGRGRQVIAVARTADVIIMMLDATKGEVQRSLLEKELESVGIRLNKHKPNIY
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KB3 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
       :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :::::
NP_001 FKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVGNRVY
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB3 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
       .::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::: .:
NP_001 MPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRG
      240       250       260       270       280       290        

              310       320       330       340       350       360
pF1KB3 QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED
       : ::.:. ..:  . ..::  : .::..: ..:::::::: :.:..::.::  ::.: ::
NP_001 QRPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHTMEHED
      300        310       320       330       340       350       

              
pF1KB3 VIQIVKK
       :::::::
NP_001 VIQIVKK
       360    

>>NP_001317073 (OMIM: 602986) developmentally-regulated   (343 aa)
 initn: 1211 init1: 974 opt: 1187  Z-score: 1362.1  bits: 260.6 E(85289): 3.9e-69
Smith-Waterman score: 1187; 56.1% identity (80.9% similar) in 330 aa overlap (5-334:4-331)

               10        20        30        40        50        60
pF1KB3 MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
           : ::.::: :.::::::::: .:::::::.::: : .:. :. ....  :::::: 
NP_001  MGILEKISEIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSASS-KGEGFDVM
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB3 KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
       :.::::....:::::::::.:: .... ::.:.::::::: .::::.::::.::::::::
NP_001 KSGDARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPG
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB3 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
       ::::: .:::::::::::::: ..:...::. :   .....:.:::. :::::.. ::: 
NP_001 IIEGAAQGKGRGRQVIAVARTADVIIMMLDATKGEVQRSLLEKELESVGIRLNKHKPNIY
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KB3 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
       :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :::::
NP_001 FKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVGNRVY
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB3 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
       .::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::: .:
NP_001 MPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRG
      240       250       260       270       280       290        

              310       320       330       340       350       360
pF1KB3 QLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDED
       : ::.:. ..:  . ..::  : .::..: ..::                          
NP_001 QRPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKAPAPSTVRSGWA              
      300        310       320       330       340                 

              
pF1KB3 VIQIVKK

>>XP_011522006 (OMIM: 602986) PREDICTED: developmentally  (364 aa)
 initn: 1179 init1: 942 opt: 1107  Z-score: 1270.2  bits: 243.6 E(85289): 5.2e-64
Smith-Waterman score: 1135; 52.7% identity (76.1% similar) in 351 aa overlap (5-334:4-352)

               10        20        30        40        50        60
pF1KB3 MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
           : ::.::: :.::::::::: .:::::::.::: : .:. :. ....  :::::: 
XP_011  MGILEKISEIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSASS-KGEGFDVM
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB3 KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
       :.::::....:::::::::.:: .... ::.:.::::::: .::::.::::.::::::::
XP_011 KSGDARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPG
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB3 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
       ::::: .:::::::::::::: ..:...::. :   .....:.:::. :::::.. ::: 
XP_011 IIEGAAQGKGRGRQVIAVARTADVIIMMLDATKGEVQRSLLEKELESVGIRLNKHKPNIY
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KB3 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
       :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :::::
XP_011 FKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVGNRVY
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB3 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
       .::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::: .:
XP_011 MPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRG
      240       250       260       270       280       290        

                                   310       320       330         
pF1KB3 QL---------------------PDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVW
       :                      ::.:. ..:  . ..::  : .::..: ..::     
XP_011 QSQDGSVGPDVWLTFSPSCPAERPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKAPAPS
      300       310       320       330        340       350       

     340       350       360       
pF1KB3 GLSVKHNPQKVGKDHTLEDEDVIQIVKK
                                   
XP_011 TVRSGWA                     
       360                         

>>XP_005256556 (OMIM: 602986) PREDICTED: developmentally  (385 aa)
 initn: 1343 init1: 942 opt: 1107  Z-score: 1269.8  bits: 243.7 E(85289): 5.4e-64
Smith-Waterman score: 1299; 54.4% identity (77.1% similar) in 384 aa overlap (5-367:4-385)

               10        20        30        40        50        60
pF1KB3 MSSTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVA
           : ::.::: :.::::::::: .:::::::.::: : .:. :. ....  :::::: 
XP_005  MGILEKISEIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSASS-KGEGFDVM
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB3 KTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPG
       :.::::....:::::::::.:: .... ::.:.::::::: .::::.::::.::::::::
XP_005 KSGDARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPG
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB3 IIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIG
       ::::: .:::::::::::::: ..:...::. :   .....:.:::. :::::.. ::: 
XP_005 IIEGAAQGKGRGRQVIAVARTADVIIMMLDATKGEVQRSLLEKELESVGIRLNKHKPNIY
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KB3 FKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVY
       :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :::::
XP_005 FKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVGNRVY
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB3 IPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKG
       .::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::: .:
XP_005 MPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRG
      240       250       260       270       280       290        

                                   310       320       330         
pF1KB3 QL---------------------PDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVW
       :                      ::.:. ..:  . ..::  : .::..: ..:::::::
XP_005 QSQDGSVGPDVWLTFSPSCPAERPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKYALVW
      300       310       320       330        340       350       

     340       350       360       
pF1KB3 GLSVKHNPQKVGKDHTLEDEDVIQIVKK
       : :.:..::.::  ::.: :::::::::
XP_005 GTSTKYSPQRVGLTHTMEHEDVIQIVKK
       360       370       380     

>>XP_005256557 (OMIM: 602986) PREDICTED: developmentally  (304 aa)
 initn: 1026 init1: 787 opt: 789  Z-score: 907.5  bits: 176.3 E(85289): 8.2e-44
Smith-Waterman score: 981; 51.8% identity (74.8% similar) in 305 aa overlap (84-367:1-304)

            60        70        80        90       100       110   
pF1KB3 GEGFDVAKTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKI
                                     .... ::.:.::::::: .::::.::::.:
XP_005                               MTSTASEAASYEFTTLTCIPGVIEYKGANI
                                             10        20        30

           120       130       140       150       160       170   
pF1KB3 QLLDLPGIIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLN
       :::::::::::: .:::::::::::::: ..:...::. :   .....:.:::. :::::
XP_005 QLLDLPGIIEGAAQGKGRGRQVIAVARTADVIIMMLDATKGEVQRSLLEKELESVGIRLN
               40        50        60        70        80        90

           180       190       200       210       220       230   
pF1KB3 SKPPNIGFKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDV
       .. ::: :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::
XP_005 KHKPNIYFKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDV
              100       110       120       130       140       150

           240       250       260       270       280       290   
pF1KB3 VEGNRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVR
       . :::::.::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. 
XP_005 IVGNRVYMPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTC
              160       170       180       190       200       210

           300                            310       320       330  
pF1KB3 IYTKPKGQL---------------------PDYTSPVVLPYSRTTVEDFCMKIHKNLIKE
       :::: .::                      ::.:. ..:  . ..::  : .::..: ..
XP_005 IYTKKRGQSQDGSVGPDVWLTFSPSCPAERPDFTDAIIL-RKGASVEHVCHRIHRSLASQ
              220       230       240        250       260         

            340       350       360       
pF1KB3 FKYALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKK
       :::::::: :.:..::.::  ::.: :::::::::
XP_005 FKYALVWGTSTKYSPQRVGLTHTMEHEDVIQIVKK
     270       280       290       300    

>>XP_016879785 (OMIM: 602986) PREDICTED: developmentally  (220 aa)
 initn: 760 init1: 521 opt: 737  Z-score: 850.1  bits: 165.2 E(85289): 1.3e-40
Smith-Waterman score: 737; 50.7% identity (76.5% similar) in 221 aa overlap (147-367:1-220)

        120       130       140       150       160       170      
pF1KB3 DLPGIIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKP
                                     ..::. :   .....:.:::. :::::.. 
XP_016                               MMLDATKGEVQRSLLEKELESVGIRLNKHK
                                             10        20        30

        180       190       200       210       220       230      
pF1KB3 PNIGFKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEG
       ::: :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :
XP_016 PNIYFKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVG
               40        50        60        70        80        90

        240       250       260       270       280       290      
pF1KB3 NRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYT
       ::::.::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::
XP_016 NRVYMPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYT
              100       110       120       130       140       150

        300       310       320       330       340       350      
pF1KB3 KPKGQLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTL
       : .:: ::.:. ..:  . ..::  : .::..: ..:::::::: :.:..::.::  ::.
XP_016 KKRGQRPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHTM
              160        170       180       190       200         

        360       
pF1KB3 EDEDVIQIVKK
       : :::::::::
XP_016 EHEDVIQIVKK
     210       220

>>XP_016879786 (OMIM: 602986) PREDICTED: developmentally  (220 aa)
 initn: 760 init1: 521 opt: 737  Z-score: 850.1  bits: 165.2 E(85289): 1.3e-40
Smith-Waterman score: 737; 50.7% identity (76.5% similar) in 221 aa overlap (147-367:1-220)

        120       130       140       150       160       170      
pF1KB3 DLPGIIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKP
                                     ..::. :   .....:.:::. :::::.. 
XP_016                               MMLDATKGEVQRSLLEKELESVGIRLNKHK
                                             10        20        30

        180       190       200       210       220       230      
pF1KB3 PNIGFKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEG
       ::: :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :
XP_016 PNIYFKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVG
               40        50        60        70        80        90

        240       250       260       270       280       290      
pF1KB3 NRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYT
       ::::.::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::
XP_016 NRVYMPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYT
              100       110       120       130       140       150

        300       310       320       330       340       350      
pF1KB3 KPKGQLPDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKYALVWGLSVKHNPQKVGKDHTL
       : .:: ::.:. ..:  . ..::  : .::..: ..:::::::: :.:..::.::  ::.
XP_016 KKRGQRPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHTM
              160        170       180       190       200         

        360       
pF1KB3 EDEDVIQIVKK
       : :::::::::
XP_016 EHEDVIQIVKK
     210       220

>>XP_011522008 (OMIM: 602986) PREDICTED: developmentally  (241 aa)
 initn: 728 init1: 489 opt: 493  Z-score: 570.3  bits: 113.5 E(85289): 5e-25
Smith-Waterman score: 685; 46.3% identity (69.8% similar) in 242 aa overlap (147-367:1-241)

        120       130       140       150       160       170      
pF1KB3 DLPGIIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKP
                                     ..::. :   .....:.:::. :::::.. 
XP_011                               MMLDATKGEVQRSLLEKELESVGIRLNKHK
                                             10        20        30

        180       190       200       210       220       230      
pF1KB3 PNIGFKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEG
       ::: :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :
XP_011 PNIYFKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVG
               40        50        60        70        80        90

        240       250       260       270       280       290      
pF1KB3 NRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYT
       ::::.::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::
XP_011 NRVYMPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYT
              100       110       120       130       140       150

        300                            310       320       330     
pF1KB3 KPKGQL---------------------PDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKY
       : .::                      ::.:. ..:  . ..::  : .::..: ..:::
XP_011 KKRGQSQDGSVGPDVWLTFSPSCPAERPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKY
              160       170       180        190       200         

         340       350       360       
pF1KB3 ALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKK
       ::::: :.:..::.::  ::.: :::::::::
XP_011 ALVWGTSTKYSPQRVGLTHTMEHEDVIQIVKK
     210       220       230       240 

>>XP_011522009 (OMIM: 602986) PREDICTED: developmentally  (241 aa)
 initn: 728 init1: 489 opt: 493  Z-score: 570.3  bits: 113.5 E(85289): 5e-25
Smith-Waterman score: 685; 46.3% identity (69.8% similar) in 242 aa overlap (147-367:1-241)

        120       130       140       150       160       170      
pF1KB3 DLPGIIEGAKDGKGRGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKP
                                     ..::. :   .....:.:::. :::::.. 
XP_011                               MMLDATKGEVQRSLLEKELESVGIRLNKHK
                                             10        20        30

        180       190       200       210       220       230      
pF1KB3 PNIGFKKKDKGGINLTATCPQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEG
       ::: :: :  :::....:   .. . . :. :: :::: ::.: .: : . :..:::. :
XP_011 PNIYFKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVG
               40        50        60        70        80        90

        240       250       260       270       280       290      
pF1KB3 NRVYIPCIYVLNKIDQISIEELDIIYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYT
       ::::.::.:: :::::::.::.: . . :. : ::   . :.: ::: .:.:: :. :::
XP_011 NRVYMPCLYVYNKIDQISMEEVDRLARKPNSVVISCGMKLNLDYLLEMLWEYLALTCIYT
              100       110       120       130       140       150

        300                            310       320       330     
pF1KB3 KPKGQL---------------------PDYTSPVVLPYSRTTVEDFCMKIHKNLIKEFKY
       : .::                      ::.:. ..:  . ..::  : .::..: ..:::
XP_011 KKRGQSQDGSVGPDVWLTFSPSCPAERPDFTDAIIL-RKGASVEHVCHRIHRSLASQFKY
              160       170       180        190       200         

         340       350       360       
pF1KB3 ALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKK
       ::::: :.:..::.::  ::.: :::::::::
XP_011 ALVWGTSTKYSPQRVGLTHTMEHEDVIQIVKK
     210       220       230       240 




367 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:20:22 2016 done: Fri Nov  4 02:20:23 2016
 Total Scan time:  7.810 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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