GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:17:37

Sequence gi568815580r:6362147_6563010 : 200864 bp : 40.36% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    981   1053   73  2  1   48   92    58 0.502   0.26
 1.02 Intr +   4742   4886  145  0  1   59   50   187 0.619  10.42
 1.03 Term +  11214  11319  106  0  1   77   50    68 0.226  -1.20
 1.04 PlyA +  11690  11695    6                               1.05

 2.02 PlyA -  15017  15012    6                               1.05
 2.01 Sngl -  17929  17255  675  1  0   76   48   189 0.754   9.64
 2.00 Prom -  18879  18840   40                              -6.75

 3.03 PlyA -  19009  19004    6                               1.05
 3.02 Term -  20247  19921  327  0  0   59   38   273 0.714  13.12
 3.01 Init -  31683  31564  120  0  0   73   69   136 0.625  10.44
 3.00 Prom -  33085  33046   40                              -6.45

 4.00 Prom +  33295  33334   40                              -6.75
 4.01 Init +  34184  34285  102  1  0   83   47    80 0.600   3.69
 4.02 Intr +  36723  36836  114  2  0   65   68    66 0.416   2.02
 4.03 Intr +  46926  46983   58  2  1   90   89    37 0.384   1.54
 4.04 Intr +  50423  50660  238  0  1   70   84   159 0.334   9.45
 4.05 Term +  51420  51579  160  0  1   86   54    87 0.436   1.53
 4.06 PlyA +  53211  53216    6                               1.05

 5.05 PlyA -  53397  53392    6                               1.05
 5.04 Term -  58480  58374  107  2  2   83   49   137 0.733   6.89
 5.03 Intr -  60225  60038  188  2  2    5   30   136 0.095  -2.09
 5.02 Intr -  67461  67316  146  0  2  -17   90   110 0.144  -1.14
 5.01 Init -  71382  71293   90  0  0   61  116    89 0.930   9.54
 5.00 Prom -  75425  75386   40                              -2.95

 6.03 PlyA -  75624  75619    6                               1.05
 6.02 Term -  76021  75800  222  1  0   69   43   152 0.611   4.73
 6.01 Init -  87477  87367  111  0  0   88   85    26 0.036   2.56
 6.00 Prom -  94056  94017   40                              -5.75

 7.03 PlyA -  94275  94270    6                               1.05
 7.02 Term - 100391  99998  394  1  1   49   36   537 0.410  38.12
 7.01 Init - 100864 100698  167  1  2   79   66   253 0.742  21.35
 7.00 Prom - 101688 101649   40                              -6.95

 8.02 PlyA - 101809 101804    6                               1.05
 8.01 Sngl - 102659 102450  210  2  0   42   41   212 0.725   6.84
 8.00 Prom - 104884 104845   40                              -4.55

 9.03 PlyA - 105026 105021    6                               1.05
 9.02 Term - 123103 122976  128  2  2  108   44   148 0.773   9.86
 9.01 Init - 132342 132300   43  0  1   59   52    63 0.309   0.43
 9.00 Prom - 137951 137912   40                              -7.85

10.00 Prom + 142369 142408   40                              -3.85
10.01 Init + 142506 142776  271  2  1   48   62   117 0.098   2.28
10.02 Intr + 147388 147526  139  2  1  136   58    91 0.118   9.50
10.03 Intr + 149258 149464  207  2  0    9  110   141 0.101   5.67
10.04 Intr + 164881 165028  148  1  1  109   47    98 0.563   7.12
10.05 Intr + 174386 174479   94  1  1   69   92    70 0.705   4.12
10.06 Term + 177719 177900  182  0  2   43   43   182 0.714   5.99
10.07 PlyA + 178342 178347    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  89234  89554  321  1  0   58   48   174 0.891   6.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_1|107_aa
WEKEGEKNRQKTVKSPFPEFVNCGRRSPFTLAKETVEQISALERGAAAVPGSDLTHRTQA
GHKTQVPRKAHSRFNRSKVPSIPTCIKTQTNTPLDVLDIDSSLADLL

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_1|324_bp
tgggaaaaagaaggagagaaaaatcgccaaaaaacggtcaagtctccgtttcctgagttc
gtaaattgtggcagaagatctccttttactctagccaaagagactgtggagcagatctct
gcattagaaagaggagcagcagcagtgcctggcagtgacctgactcaccgaacccaagca
gggcacaaaacacaagtccctaggaaagcccacagcaggtttaacaggagtaaagtccct
tccattcctacttgcataaaaacgcagaccaacactccactagacgtccttgacattgac
tcctctctagctgatctgctgtag

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_2|224_aa
MDKFLHIYTLPRLNQEEVESLKRPITNSEIEAVINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKRFQSIEKERILPNSFYEASIIPIPKPGRDKTEKEIFIPISLMNIDAKILNKILA
KRILQHIEKLIHHDQVGFISGMQGWFNICKSINVIHHINRTNDKNHMIISIDAEKALDKI
QLAFMLKTFNKLGIDGTYIKIIRAMYDKPTANIILNGQKLEHFL

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_2|675_bp
atggataaattcctgcacatatacaccctcccaagactaaaccaggaagaagtcgaatcc
ctaaagagaccaataacaaattctgaaattgaggcagtaattaatagcctaccaaccaaa
aaaagtccaggaccagacggattcacagctgaattctaccagaggtacaaggaggagctg
gtaccattccttctgaaacgattccaatcaatagaaaaagagagaatcctccctaactca
ttttatgaggccagcatcattccgataccaaaacctggcagagacaaaacagaaaaagaa
attttcattccaatatccctgatgaacattgatgcaaaaatcctcaataaaatactggca
aaacgaatcctgcagcacatcgaaaagcttatccaccacgatcaagtcggcttcatatct
gggatgcaaggctggttcaacatatgcaaatcaataaatgtaatccatcacataaacaga
accaatgacaaaaaccacatgattatctcaatagatgcagaaaaggccttggacaaaatt
caacttgccttcatgctaaaaactttcaataaactaggtatcgatggaacatatatcaaa
ataataagagctatgtatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaacatttcctttga

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_3|148_aa
MDLGFMSITGRGGQEPAGEAMITIWVGDDVAPTRAVAASVDHNSSPARGQHWMENESDEL
TEVGFRRWVITNSSELKEHALTQCKEAKNLEKRLDKLLTRIISLEKNINELMELKSTARE
LREAYTSINSQIDQVEKGYQRLKINLMK

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_3|447_bp
atggacctaggctttatgagtatcactggccgtggaggccaagagcctgctggagaggct
atgatcacaatctgggtgggagatgatgtagctccaaccagggcagtagcagcgtctgtg
gatcacaactcctcgccagcaaggggacaacactggatggagaatgagtctgatgaattg
acagaagtaggcttcagaaggtgggtaataacaaactcctctgagctaaaggagcatgct
ctaacccaatgcaaggaagctaagaaccttgaaaaaaggttagacaaattgctaactaga
ataatcagtttagagaagaacataaatgaactgatggagctgaaaagcacagcacgagaa
cttcgtgaagcatacacaagtatcaatagccaaattgatcaagtagaaaaaggatatcag
agattgaagatcaacttaatgaaataa

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_4|223_aa
MQDLGIPVEGAPGRDGTAPSAAQTPGASSATTHQATLPTQGICQTWKPASEDPKGAPQCL
SSNPKTTSHFLLTSKLLALDLDLNAICYTAPRRTRGLSISKSSFRVSLISLTVAFITSCL
CSAVVCSHTDSVLRVFVEHALTHVPSPMPSKGGLLPPKRSKKCRLRYKPHRWNRLENRRA
TLHLFQPRTETGACHKHLLEQLQQKDPGDGPPASHSGVQTSVK

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_4|672_bp
atgcaggaccttgggatcccagtggaaggtgcccctggcagggatggcacagccccttct
gcagcccagacacccggagcctcatctgctaccacccaccaggccactttacctactcag
gggatctgccagacctggaagccagcctctgaggaccccaagggagcaccccagtgtttg
tccagcaatccaaaaacaaccagccactttctgctgacatccaaattgttggccctggat
ttagatcttaacgccatttgttacacagcaccaagaagaactcgagggctttccatcagc
aaatcttccttcagagtcagcctgatctccctcactgttgcttttatcacctcctgcctc
tgctcagcagttgtctgctcacatacggactcggtcctacgagtatttgttgagcatgca
cttacccacgtgccaagtcccatgccaagcaaaggaggcttattaccaccaaaaaggagt
aagaagtgtcgtttaagatataaaccacacaggtggaatagattagaaaaccgaagagcc
acactacacttatttcagccaaggactgaaactggagcctgccacaagcatcttctagaa
cagctccaacagaaggatccaggagatgggccaccagcaagtcatagtggagtccaaaca
agtgtgaagtga

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_5|176_aa
MKAEEYPPDWRAVIKNRCEYGDVCIELEPKGEEEEERNKRIREKKMKEDLDMSNVVKNSC
RISRQQDGNLSVQLQRMSGQNLIQSKALALFNSMKAERGGEAAEEKFGAGRGWVMRFKER
SCLHNIKVQGETASADAEAAAEIATATPVFRKHQLDQSAAINIKTRLSMGKEIMTC

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_5|531_bp
atgaaagcagaagaatatcctccagattggagggctgtaataaaaaaccgatgtgagtat
ggagatgtatgcattgagttggaacccaagggggaggaggaggaggaaagaaataaaagg
atcagagagaaaaaaatgaaggaggatttggatatgtcgaatgtggtgaaaaattcatgc
agaattagcaggcagcaggatggaaatttgagtgtgcaactgcagagaatgtcaggccaa
aacctgatccagagtaaggccctagctcttttcaattctatgaaggctgagagaggtggg
gaagctgcagaagaaaagtttggagctggcagaggttgggtcatgaggtttaaggaaaga
agctgtctccataacataaaagtgcaaggtgaaacagcaagtgctgatgcagaagctgca
gcagaaattgccacagccaccccagtcttccgcaagcaccaactcgatcagtcagcagcc
atcaacatcaagacaagactttccatgggcaaagagattatgacttgctga

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_6|110_aa
MALALVEKDREQMNQLCTMFELISAREKIKQAQGDGSSLTFLPAGGGHEPQHWVWKWAEE
HWEALPLLASLSSSSSEQRSDVSYHCSLHITLGDEHEGKAKLLTETLLLT

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_6|333_bp
atggcgcttgcattggtagagaaagaccgtgaacaaatgaatcaattatgtactatgttt
gagctgataagtgcaagggagaaaataaaacaggcacagggagatgggtcgagtttgacc
ttccttccggctggaggaggacacgagccacagcactgggtgtggaagtgggctgaagag
cactgggaagctttgcctcttctggcatccctctcttcgtcctcctctgagcagagaagt
gatgtctcatatcactgcagccttcatataaccttgggagacgagcatgaaggtaaagcc
aagctcctcacagagacgctgcttctgacctga

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_7|186_aa
MAGEKVEKPDTKEKKPEAKKVDAGGKVKKGNLKAKKPKKGKPHCSRNPVLVRGIGRGKRV
VFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKL
RKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFALTNGIY
PHKLVF

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_7|561_bp
atggcaggtgaaaaagttgagaagccagatactaaagagaagaaacccgaagccaagaag
gttgatgctggtggcaaggtgaaaaagggtaacctcaaagctaaaaagcccaagaagggg
aagccccattgcagccgcaaccctgtccttgtcagaggaattggcaggggcaagagggtg
gttttcctgaagcagctggctagtggcttattacttgtgactggacctctggtcctcaat
cgagttcctctacgaagaacacaccagaaatttgtcattgccacctcaaccaaaatcgat
atcagcaatgtaaaaatcccaaaacatcttactgatgcttacttcaagaagaagaagctg
cggaagcccagacaccaggaaggtgagatcttcgacacagaaaaagagaaatatgagatt
acggagcagcgcaagattgatcagaaagctgtggactcacaaattttaccaaaaatcaaa
gctattcctcagctccagggctacctgcgatctgtgtttgctctgacgaatggaatttat
cctcacaaattggtgttctaa

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_8|69_aa
MKHAKEQENMALSQKKFAEILHEEVQMLDSLDKDKSTVLHMLKELKENRRVIHEQIVKIN
EEKEVTNKS

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_8|210_bp
atgaagcatgcaaaggaacaagaaaatatggccctttcacagaagaaatttgcagaaatt
ttacatgaagaagtacagatgttggattcactagacaaagacaaatcaactgtcttacat
atgctcaaggagctaaaggagaacagaagagttattcatgagcaaatagtgaaaattaat
gaggagaaagaagttacaaacaagagctaa

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_9|56_aa
MRDLPLPVTWTPFTGSKQSIEEKVLMEGEAGLDALCGNSRGLTAEVEEFQGAAKTA

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_9|171_bp
atgagggatttgccgctgccggtaacttggacaccttttactggcagtaaacagtccata
gaggaaaaagtgctcatggagggagaggcaggcttggatgctctatgtggaaactccaga
gggctaacagcagaggttgaagagttccaaggcgctgctaagaccgcctaa

>gi568815580r:6362147_6563010|GENSCAN_predicted_peptide_10|346_aa
MSLISMAMRPRTSGVTPDNKAGSEGRKEGRRETGRKEGERVRDRRKEEREEGGKEGRKEG
RKEDKQVSKRHLCWAGLENCRAASSPSSVTGAEIAMSLFLKLSAVSLPSVTPGDRLSESP
VKAEASFGCSSGFRDANYQDEYFKALWVLGMSSALSSCNNRGHHTLMYRHGASASLPWGL
GKPGATMGSKYPWINTDSCFSHRSSGLRHQDDIASEQKTKYTNKHQKVLLPVRMQICEGL
LGLDFQIADWTSFSCCFFAVLSPKKYASQLYPLNYGDTESIPNGSVDQRTTTEEAGDQLE
GYCNEPGDCDTGGKWPDSGSILKAELMSFERKKGMKDDSKAFHLSS

>gi568815580r:6362147_6563010|GENSCAN_predicted_CDS_10|1041_bp
atgtccttgatctccatggctatgaggccaagaacctcaggtgtcaccccagacaacaag
gctggttcagaaggaaggaaagaaggaaggagagaaacaggaaggaaggaaggagagaga
gtgagggatagaaggaaggaggaaagggaggaaggagggaaggaaggaaggaaggaaggg
aggaaggaagacaagcaggtaagcaagcgacacctctgctgggcaggcctggagaactgc
agagctgcttcaagtcccagctctgtcacaggggctgagattgcaatgtcactgttctta
aaactgtctgctgtgtcacttccgagtgtaacccctggagacaggctctcagaatcacct
gtgaaggcggaagccagttttggctgctccagcggatttagggatgccaactaccaggat
gagtatttcaaagctctctgggtcctggggatgagcagtgccctctcatcctgtaataat
cgtggacatcacacactgatgtacagacatggtgccagcgcctcccttccttggggtctt
ggaaaacccggtgccacaatgggatctaagtatccttggatcaatacggattcgtgtttc
tcacaccgaagttcagggttgagacatcaagatgacattgcttcagaacagaaaaccaag
tatacaaataagcaccaaaaagttttacttcctgtgagaatgcaaatatgcgaaggactc
ctaggtttggacttccagattgcagattggacttccttctcgtgttgtttctttgctgtc
ctctcccccaaaaaatatgcctcacaactttatccccttaactatggggatactgagagc
attcccaatggctccgtggatcaaaggacaacaactgaggaagcgggtgaccagttggaa
ggctattgcaacgagccaggtgactgtgacacaggtggtaaatggccggattcaggatcg
attttaaaggcagagctgatgagtttcgagagaaagaaaggaatgaaggatgattccaaa
gctttccacctgagcagttag