Result of FASTA (ccds) for pF1KB1226
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB1226, 1222 aa
  1>>>pF1KB1226 1222 - 1222 aa - 1222 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1936+/-0.00114; mu= 17.5889+/- 0.068
 mean_var=72.7342+/-13.841, 0's: 0 Z-trim(102.3): 17  B-trim: 0 in 0/49
 Lambda= 0.150385
 statistics sampled from 6899 (6903) to 6899 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.561), E-opt: 0.2 (0.212), width:  16
 Scan time:  4.440

The best scores are:                                      opt bits E(32554)
CCDS10570.1 NOMO2 gene_id:283820|Hs108|chr16       (1222) 8017 1749.6       0
CCDS32394.1 NOMO2 gene_id:283820|Hs108|chr16       (1267) 8017 1749.6       0
CCDS42123.1 NOMO3 gene_id:408050|Hs108|chr16       (1222) 7996 1745.0       0
CCDS10556.1 NOMO1 gene_id:23420|Hs108|chr16        (1222) 7976 1740.7       0


>>CCDS10570.1 NOMO2 gene_id:283820|Hs108|chr16            (1222 aa)
 initn: 8017 init1: 8017 opt: 8017  Z-score: 9390.2  bits: 1749.6 E(32554):    0
Smith-Waterman score: 8017; 99.9% identity (99.9% similar) in 1222 aa overlap (1-1222:1-1222)

               10        20        30        40        50        60
pF1KB1 MLVGQGAGLLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLVGQGAGLLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB1 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB1 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB1 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB1 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB1 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB1 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGRISIIRFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGRISIIRFP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB1 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB1 PQTFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQTFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB1 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAI
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB1 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB1 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB1 REKNGNEEGEERMTKPSVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
       :::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS10 REKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB1 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB1 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB1 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB1 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB1 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB1 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KB1 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGALGQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGALGQA
             1150      1160      1170      1180      1190      1200

             1210      1220  
pF1KB1 ASDNSGPEDAKRQAKKQKTRRT
       ::::::::::::::::::::::
CCDS10 ASDNSGPEDAKRQAKKQKTRRT
             1210      1220  

>>CCDS32394.1 NOMO2 gene_id:283820|Hs108|chr16            (1267 aa)
 initn: 8017 init1: 8017 opt: 8017  Z-score: 9389.9  bits: 1749.6 E(32554):    0
Smith-Waterman score: 8017; 99.9% identity (99.9% similar) in 1222 aa overlap (1-1222:1-1222)

               10        20        30        40        50        60
pF1KB1 MLVGQGAGLLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MLVGQGAGLLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB1 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB1 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB1 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB1 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB1 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB1 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGRISIIRFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGRISIIRFP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB1 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB1 PQTFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PQTFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB1 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAI
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB1 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB1 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB1 REKNGNEEGEERMTKPSVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
       :::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS32 REKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB1 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB1 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB1 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB1 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB1 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB1 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KB1 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGALGQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGALGQA
             1150      1160      1170      1180      1190      1200

             1210      1220                                        
pF1KB1 ASDNSGPEDAKRQAKKQKTRRT                                      
       ::::::::::::::::::::::                                      
CCDS32 ASDNSGPEDAKRQAKKQKTRRTLRLQEEFQLMWCLVPWRGTLGIHLFSSLPFASEILLET
             1210      1220      1230      1240      1250      1260

>>CCDS42123.1 NOMO3 gene_id:408050|Hs108|chr16            (1222 aa)
 initn: 7996 init1: 7996 opt: 7996  Z-score: 9365.5  bits: 1745.0 E(32554):    0
Smith-Waterman score: 7996; 99.7% identity (99.8% similar) in 1222 aa overlap (1-1222:1-1222)

               10        20        30        40        50        60
pF1KB1 MLVGQGAGLLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MLVGQGAGPLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB1 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB1 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB1 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB1 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB1 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB1 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGRISIIRFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS42 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGQISIIRFP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB1 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLK
       :::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
CCDS42 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKANPGTYKVQVMVPEAETRAGLTLK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB1 PQTFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PQTFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB1 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAI
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB1 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB1 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB1 REKNGNEEGEERMTKPSVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
       :::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS42 REKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB1 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB1 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB1 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB1 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB1 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB1 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KB1 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGALGQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGALGQA
             1150      1160      1170      1180      1190      1200

             1210      1220  
pF1KB1 ASDNSGPEDAKRQAKKQKTRRT
       ::::::::::::::::::::::
CCDS42 ASDNSGPEDAKRQAKKQKTRRT
             1210      1220  

>>CCDS10556.1 NOMO1 gene_id:23420|Hs108|chr16             (1222 aa)
 initn: 7976 init1: 7976 opt: 7976  Z-score: 9342.1  bits: 1740.7 E(32554):    0
Smith-Waterman score: 7976; 99.3% identity (99.8% similar) in 1222 aa overlap (1-1222:1-1222)

               10        20        30        40        50        60
pF1KB1 MLVGQGAGLLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLVGQGAGPLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB1 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB1 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB1 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB1 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFSFYSLPSGGYTVIPFYRGERI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB1 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVTLNNQIKVKTK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB1 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGRISIIRFP
       :::::::::::::::::::::::::::::::::::::::::::.::::::::.:::::::
CCDS10 ADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIIATGFSVCGQISIIRFP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB1 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB1 PQTFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
       :::::::::.::.:::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQTFPLTVTNRPMMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB1 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAI
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS10 NAMTFTFDNVLPGKYKISIMHEDWCWKNKSLEVEVLEDDMSAVEFRQTGYMLRCSLSHAI
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB1 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB1 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAEIEARRQE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB1 REKNGNEEGEERMTKPSVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
       :::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS10 REKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB1 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB1 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB1 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTA
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB1 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YSCYGTVSSLNGEPEQGVAMEAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB1 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB1 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYILPQVSFTAVGYHKH
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KB1 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVGALGQA
       :::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS10 ITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVRALGQA
             1150      1160      1170      1180      1190      1200

             1210      1220  
pF1KB1 ASDNSGPEDAKRQAKKQKTRRT
       ::::::::::::::::::::::
CCDS10 ASDNSGPEDAKRQAKKQKTRRT
             1210      1220  




1222 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:04:00 2016 done: Fri Nov  4 02:04:01 2016
 Total Scan time:  4.440 Total Display time:  0.230

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com