GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:53:10

Sequence gi568815597f:103426071_103651777 : 225707 bp : 35.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   7026   6821  206  2  2  103   97   122 0.789  12.52
 1.02 Intr -  21119  21052   68  2  2   62  116    55 0.123   2.48
 1.01 Init -  22830  22621  210  0  0   51   72   106 0.058   4.13
 1.00 Prom -  42555  42516   40                              -5.65

 2.00 Prom +  55665  55704   40                              -4.25
 2.01 Init +  60321  60936  616  2  1   71   60   174 0.037   8.44
 2.02 Intr +  79551  79612   62  1  2   61  115    44 0.133   1.93
 2.03 Intr +  93855  94051  197  2  2   63   86   111 0.153   5.69
 2.04 Intr +  99997 100192  196  1  1   75   95   156 0.961  13.50
 2.05 Intr + 101625 101672   48  2  0   68   86    46 0.548   0.36
 2.06 Intr + 110846 110980  135  1  0   32   34   115 0.427   0.34
 2.07 Intr + 111272 111414  143  1  2   30   68   225 0.477  12.93
 2.08 Intr + 115280 115405  126  2  0   84   91    31 0.559   1.87
 2.09 Intr + 117226 117377  152  1  2   34   91    79 0.414   1.69
 2.10 Intr + 118871 119032  162  0  0   32   90   116 0.803   5.23
 2.11 Intr + 120178 120272   95  2  2   35  100    21 0.339  -3.24
 2.12 Intr + 120907 120965   59  0  2   61  103    17 0.360  -2.74
 2.13 Term + 124871 125039  169  2  1  105   28   146 0.799   6.67
 2.14 PlyA + 125179 125184    6                               1.05

 3.04 PlyA - 125334 125329    6                               1.05
 3.03 Term - 143912 143416  497  0  2   55   42   301 0.536  15.94
 3.02 Intr - 144185 143927  259  2  1   76    2   249 0.303  11.21
 3.01 Init - 144510 144310  201  0  0   99    2   163 0.700   7.76
 3.00 Prom - 144745 144706   40                              -8.45

 4.00 Prom + 145486 145525   40                              -9.75
 4.01 Init + 145533 145700  168  2  0   78   94    75 0.926   5.12
 4.02 Intr + 146040 146186  147  2  0   60   98    37 0.711   1.41
 4.03 Intr + 146993 147190  198  1  0   74   99   180 0.999  16.33
 4.04 Intr + 147638 147868  231  1  0   70   73   182 0.999  11.95
 4.05 Intr + 148190 148323  134  1  2   75   33   130 0.993   4.72
 4.06 Intr + 149371 149470  100  1  1   69  111    59 0.989   5.49
 4.07 Intr + 151420 151538  119  0  2   16  100    94 0.989   1.74
 4.08 Intr + 151650 151775  126  0  0   72  119   102 0.995  10.57
 4.09 Intr + 190681 190747   67  1  1   33  109    88 0.046   3.39
 4.10 Intr + 191419 191538  120  0  0   28   94    64 0.326   0.77
 4.11 Intr + 191884 192030  147  0  0   70   98    37 0.831   2.41
 4.12 Intr + 192841 193038  198  0  0   78   91   192 0.999  17.13
 4.13 Intr + 193484 193714  231  1  0   70   73   144 0.994   8.15
 4.14 Intr + 194481 194614  134  2  2   67   33   125 0.983   3.42
 4.15 Intr + 195724 195823  100  1  1   50  111    75 0.983   5.19
 4.16 Intr + 197796 197914  119  2  2   49  100    94 0.999   5.04
 4.17 Intr + 198026 198151  126  2  0   72  119    85 0.996   8.87
 4.18 Term + 199487 199676  190  2  1   79   38    96 0.885  -0.36
 4.19 PlyA + 202458 202463    6                               1.05

 5.03 PlyA - 203050 203045    6                               1.05
 5.02 Term - 224328 224210  119  1  2  103   33   122 0.929   5.92
 5.01 Intr - 225009 224904  106  0  1   32   16   149 0.582   0.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  93882  94051  170  2  2   92   86    93 0.808   8.55
S.002 Term + 153241 153430  190  1  1   89   38    93 0.952   0.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:103426071_103651777|GENSCAN_predicted_peptide_1|162_aa
MNKKGKQPIVDMEKVFVVWIEDQTSHNIPVNLNLIQSKAVTLFHSVSTERGEEAAEEKSE
TSRGWLMRFKKLPQLPQPSAITTLISQRPSTSRLARGIPTPEYVMRCVKSMAMDANSLCV
SGFKQLYTLMLSYTQQQFVTSLGNSSYSFELQPNFLSITALX

>gi568815597f:103426071_103651777|GENSCAN_predicted_CDS_1|486_bp
atgaataagaaaggaaaacagcctattgttgatatggaaaaagttttcgtggtttggata
gaagatcaaaccagccacaacattcctgtaaacctaaacctaatccagagtaaggctgta
actctctttcattctgtgtcaactgagagaggtgaggaagctgcagaagaaaagtctgaa
actagcagaggttggctcatgaggtttaagaaattgccacagctaccccaaccttcagca
atcaccaccctgattagtcagcggccatcaacatcaagattggcacgagggataccaaca
ccggaatatgtgatgagatgtgtgaagagcatggcaatggatgcaaactccctttgtgtt
tctggctttaagcagctctatactctcatgctgtcctacactcagcagcaatttgtcaca
agtttgggaaattcttcctactcttttgaactccagcccaatttcctttctatcactgcc
ctagnn

>gi568815597f:103426071_103651777|GENSCAN_predicted_peptide_2|719_aa
MGKDFMSKTPKAMTIKAKIDKWDLIKLKSFCTAKATTISVNRKPTEWEKIFAICSSDKGL
ISRIYNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREIQIKTT
MRYHLTAVRMAIIKKSGNSRCWRGCGEVGTLLHSRWDCKLVQPLWKSVWRFLRDLELEIP
FDPAIPLLGVYPKDYKSCCYKDTCTRNFNMKEKMRQMNTLKAHLDKYGKRIEEAEMVLTD
NEEFNEKVICKHLKKVRELSMQISVGTASLKERMVKAKVLVMGLKCSSTARRKMAAPEQP
LAISRGCTSSSSLSPPRGDRTLLVRHLPAELTAEEKEDLLKYFGAQSVRVLSDKGRLKHT
AFATFPNEKAAIKILSKSRAEGYFVLLSHEKHLNCFDHVPSQVDEDIATQSADQEGRIYE
DYMPLHAPLPPTSPQPPEEPPLPDEDEELSSEESEYESTDDEDRQRMNKLMELANLQPKR
PKTIKQRHVRKKRKIKDMLNTPLCPSHSSLHPVLLPSDVFDQPQPVGNKRIEFHISTDMP
AAFKKDLEKEQNCEEKNHDLPATEVDASNIGFGKIFPKPNLDITEEIKEDSDEMPSECIS
RRELEKGRISREEMETLSVFRSYEPGEPNCRIYVKNLAKHVQEKDLKYIFGRYVDFSSET
QRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVVSFKSIYFKTI

>gi568815597f:103426071_103651777|GENSCAN_predicted_CDS_2|2160_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatgacaataaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagcaactaccatcagtgtg
aacaggaaacctacagaatgggagaaaatttttgcaatctgctcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaatttacaagaaaaaaactaacaaccccatc
aaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaa
agacacatgaaaaaatgctcatcatcactggccataagagaaatacaaatcaaaaccaca
atgagataccatctcacagcagttagaatggcgatcattaaaaagtcaggaaacagcagg
tgctggagaggatgtggagaagtaggaacacttttacacagtcggtgggactgtaaacta
gttcaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaatacca
tttgacccagccatcccattactgggtgtatacccaaaggattataaatcatgctgctat
aaagacacatgcacacgtaattttaacatgaaagaaaaaatgcgacaaatgaatacactt
aaagcacacttggacaagtatgggaagagaatagaggaggcagagatggtgttgactgac
aatgaagaatttaatgagaaagtcatatgtaagcatctgaagaaagtcagggagctaagc
atgcagatatctgtaggaacagcatccctgaaagagagaatggtaaaggcaaaggtctta
gttatgggtctgaagtgttcaagcacagccagaaggaaaatggcagctcccgagcagccg
cttgcgatatcaaggggatgcacgagctcctcctcgctttccccgcctcggggcgaccga
acccttctggtcaggcacctgccggctgagcttactgctgaggagaaagaggacttgctg
aagtacttcggggctcagtctgtgcgggtcctgtcagataaggggcgactgaaacataca
gcttttgccacattccctaatgaaaaagcagctataaagatcctttccaaaagtagagca
gagggatattttgttctactgagccacgaaaaacacctgaattgtttcgaccatgtgcct
tcccaggttgatgaagacattgctacacagtctgcagatcaggaaggaagaatttatgaa
gactatatgccattgcatgcacctcttccacccacatctcctcagccacctgaggaacct
cctttgccagacgaggatgaggaattatctagtgaagaatcagaatatgaaagcactgat
gatgaggaccgacagagaatgaacaaattaatggaactagcaaatcttcagcccaaaaga
cctaaaacaataaagcagcgccatgtgagaaaaaagagaaaaataaaggatatgttgaat
acacctttgtgtccttcacacagcagtttacatccagtgctgttaccttcagatgtattt
gaccaaccacaacctgtaggtaacaaaagaattgaattccatatatctaccgacatgcca
gctgcatttaagaaagatttagaaaaggaacaaaattgtgaggaaaaaaatcatgattta
cctgctactgaagttgatgcatccaatataggatttggaaaaatcttccccaaacctaat
ttggacatcacagaggagattaaagaagactctgatgaaatgccttcagaatgtatttct
agaagggaattggaaaagggcagaatttctagagaagaaatggaaacactttcagttttc
agaagttatgaaccgggtgaaccaaactgtagaatttatgtaaagaatttagctaaacat
gttcaagaaaaggaccttaaatatatttttggaagatatgttgacttttcatcagaaaca
cagcggatcatgtttgatatacgtttgatgaaagaaggtcgtatgaaaggacaagctttc
attggacttcctaatgaaaaagcagcagcaaaagccttaaaggaagctaatggatatgtg
ctttttggaaaacccatggtggttgtatcctttaaatccatctatttcaaaactatataa

>gi568815597f:103426071_103651777|GENSCAN_predicted_peptide_3|318_aa
MEPLIHTEYLCSGDAIILIFMVLGARVVISFCILSVMPGYMLPPDSTVLAYRSLRMSTSH
FMMELKMGGGGCGSGHLLLKVQGNIAQFLLDVVSDLPLGSGAEAIANLGKDLHEVVGQVL
ASQVQMQNGVREGVALIDGHHVGDPISKAHDNASVEGQPSLDGHVHGQGVEGIKHDLSHL
LSVGLEVQGVLGQQHQVLLQGHVQSLVEGVMPDLLYVIPVGHDTMLNGGTSGSGYCACSQ
PCSPHRSPSGPCPPSCPGAGGTDDGRKHGWGLSSPAKPALHMLEPLSITSTAISSSIATG
GGVGQWSGRTTWCMGWQR

>gi568815597f:103426071_103651777|GENSCAN_predicted_CDS_3|957_bp
atggagccgctgatccacacggagtacttgtgctctggggatgcgatcatcttgatcttc
atggtgctaggtgcccgggtggtgatctccttctgcatcctgtcggtgatgcctgggtac
atgttgccaccagatagcaccgtgttggcctacaggtctttgcggatgtccacgtcacac
ttcatgatggagttgaagatgggaggaggaggatgtggcagtggccatctactgctcaaa
gtccagggcaacatagcacagtttctccttgacgtagtgtctgatctcccgctcggcagt
ggtgctgaagctatagccaaccttggtaaggatcttcatgaggtagttggtcaggtcctg
gccagccaggtccagatgcagaatggtgtcagggagggcgtagcccttatagatgggcac
catgtgggtgaccccatctccaaagcccatgacaatgccagtgtagagggacagcctagc
ctggatggccacgtacatggccagggtgttgaaggtatcaaacatgatctgagtcatctt
ctctctgttggccttgaggttcagggggtcctcggtcagcagcaccaggtgctcctccaa
ggccatgtgcagtcccttgtagaaggtgtgatgccagatcttctctatgtcatcccagtt
ggtcatgataccatgcttaatgggggtacttcagggtcaggatactgtgcttgctctcag
ccatgtagcccacataggagtccctctggcccatgcccaccatcatgccctggtgccggg
ggcaccgatgatggaaggaaacatggctgggggttgtcgtccccagcaaagccagctttg
cacatgctggagccattgtcaatcaccagtacggcaatctcttcttccattgcgactggt
ggaggagtgggacagtggagcggcaggacaacatggtgcatgggctggcagaggtga

>gi568815597f:103426071_103651777|GENSCAN_predicted_peptide_4|884_aa
MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMSGN
AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLVGL
LDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAG
SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKLYKMAVG
FMLAHPYGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEH
RWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDCLYYTWLGHFMAK
NMLVEDQSGSYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAI
YNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGT
SSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLTGLLDLALE
KDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIY
QEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKLYKMAVGFMLAHP
YGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIR
NMVIFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCDV
ISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL

>gi568815597f:103426071_103651777|GENSCAN_predicted_CDS_4|2655_bp
atgaagttctttctgttgcttttcaccattgggttctgctgggctcagtattccccaaat
acacaacaaggacggacatctattgttcatctgtttgaatggcgatgggttgatattgct
cttgaatgtgagcgatatttagctcccaagggatttggaggggttcaggtctctccacca
aatgaaaatgttgcaattcacaaccctttcagaccttggtgggaaagataccaaccagtt
agctataaattatgcacaagatctggaaatgaagatgaatttagaaacatggtgactaga
tgtaacaatgttggggttcgtatttatgtggatgctgtaattaatcatatgtctggtaat
gctgtgagtgcaggaacaagcagtacctgtggaagttacttcaaccctggaagtagggac
tttccagcagtcccatattctggatgggattttaatgatggtaaatgtaaaactggaagt
ggagatatcgagaactacaatgatgctactcaggtcagagattgtcgtctggttggtctt
cttgatcttgcactggagaaagattatgtgcgttccaagattgccgaatatatgaatcat
ctcattgacattggtgttgcagggttcagacttgatgcttccaagcacatgtggcctgga
gacataaaggcaattttggacaaactgcataatctaaacagtaactggttccctgcagga
agtaaacctttcatttaccaggaggtaattgatctgggtggtgagccaattaaaagcagt
gactactttggaaatggccgggtgacagaattcaagtatggtgcaaaactcggcacagtt
attcgcaagtggaatggagagaagatgtcttacctaaagctgtataaaatggcagttgga
tttatgcttgctcatccttatggttttacacgagtaatgtcaagctaccgttggccaaga
cagtttcaaaatggaaacgatgttaatgattgggttgggccaccaaataataatggagta
attaaagaagttactattaatccagacactacttgtggcaatgactgggtctgtgaacat
cgatggcgccaaataaggaacatggttaatttccgcaatgtagtggatggccagcctttt
acaaactggtatgataatgggagcaaccaagtggcttttgggagaggaaacagaggattc
attgttttcaacaatgatgactgtctttactacacgtggcttggtcacttcatggctaaa
aacatgcttgtggaagaccagtctggctcgtattccccaaatacacaacaaggacggaca
tctattgttcatctgtttgaatggcgatgggttgatattgctcttgaatgtgagcgatat
ttagctccgaagggatttggaggggttcaggtctctccaccaaatgaaaatgttgcaatt
tacaaccctttcagaccttggtgggaaagataccaaccagttagctataaattatgcaca
agatctggaaatgaagatgaatttagaaacatggtgactagatgtaacaatgttggggtt
cgtatttatgtggatgctgtaattaatcatatgtgtggtaacgctgtgagtgcaggaaca
agcagtacctgtggaagttacttcaaccctggaagtagggactttccagcagtcccatat
tctggatgggatttcaatgatggtaaatgtaaaactggaagtggagatatcgagaactac
aatgatgctactcaggtcagagattgtcgtctgactggtcttcttgatcttgcactggag
aaggattacgtgcgttctaagattgccgaatatatgaaccatctcattgacattggtgtt
gcagggttcagacttgatgcttccaagcacatgtggcctggagacataaaggcaattttg
gacaaactgcataatctaaacagtaactggttccctgcaggaagtaaacctttcatttac
caggaggtaattgatctgggtggtgagccaattaaaagcagtgactactttggtaatggc
cgggtgacagaattcaagtatggtgcaaaactcggcacagttattcgcaagtggaatgga
gagaagatgtcttacttaaagctgtacaaaatggcagttggatttatgcttgctcatcct
tacggatttacacgagtaatgtcaagctaccgttggccaagacagtttcaaaatggaaac
gatgttaatgattgggttgggccaccaaataataatggagtaattaaagaagttactatt
aatccagacactacttgtggcaatgactgggtctgtgaacatcgatggcgccaaataagg
aacatggttattttccgcaatgtagtggatggccagccttttacaaattggtatgataat
gggagcaaccaagtggcttttgggagaggaaacagaggattcattgttttcaacaatgat
gactggtcattttctttaactttgcaaactggtcttcctgctggcacatactgtgatgtc
atttctggagataaaattaatggcaattgcacaggcattaaaatttacgtttctgatgat
ggcaaagctcatttttctattagtaactctgctgaagatccatttattgcaattcatgct
gaatctaaattgtaa

>gi568815597f:103426071_103651777|GENSCAN_predicted_peptide_5|74_aa
HNAKQGPSVPRGIEASGAAHFEDLQVDFTEMPKCRSDIVWIKDWNVAPLWPQWKGPQTIN
LTTPTAVNVEGIPA

>gi568815597f:103426071_103651777|GENSCAN_predicted_CDS_5|225_bp
cacaatgcgaagcaaggcccctctgtacctcggggaatagaagcctctggagcagctcat
tttgaagatcttcaagtggacttcacagaaatgcctaaatgtagaagtgacattgtgtgg
atcaaggactggaacgtggctccgctgtggccacagtggaaaggaccccagacaattaac
ctgaccactcccacagctgtcaatgtagaaggaatcccagcctag