GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:31:15

Sequence gi568815583r:52482157_52713859 : 231703 bp : 38.84% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6978   7098  121  2  1   13   94   148 0.982   8.30
 1.02 Term +   8236   8372  137  2  2   12   48   115 0.616  -2.90
 1.03 PlyA +   9740   9745    6                               1.05

 2.00 Prom +  17538  17577   40                              -4.35
 2.01 Sngl +  23033  23707  675  1  0   77   38   735 0.509  63.33
 2.02 PlyA +  23733  23738    6                               1.05

 3.00 Prom +  45763  45802   40                              -3.25
 3.01 Init +  46510  46614  105  0  0   68    3   232 0.907  10.97
 3.02 Term +  46900  47283  384  0  0   26   41   233 0.813   6.30
 3.03 PlyA +  48511  48516    6                              -0.45

 4.03 PlyA -  48720  48715    6                               1.05
 4.02 Term -  50477  50332  146  0  2  110   48    78 0.193   3.09
 4.01 Init -  58405  58090  316  1  1  100   31   165 0.199   9.54
 4.00 Prom -  59512  59473   40                              -6.65

 5.13 PlyA -  61331  61326    6                               1.05
 5.12 Term -  69948  69778  171  0  0   82   38   134 0.908   4.64
 5.11 Intr -  75066  74944  123  0  0    2   98   102 0.113   2.46
 5.10 Intr -  86746  86692   55  0  1   84  105    80 0.006   7.36
 5.09 Intr - 102788 102589  200  2  2   58   80   218 0.918  15.23
 5.08 Intr - 111580 111521   60  1  0  100   75    53 0.746   3.21
 5.07 Intr - 123090 122977  114  0  0   80   69    34 0.538   0.42
 5.06 Intr - 128227 126412 1816  0  1   63  111   966 0.950  82.77
 5.05 Intr - 129099 128974  126  2  0   96   91   161 0.999  16.07
 5.04 Intr - 129621 129419  203  0  2   35   98   143 0.944   7.16
 5.03 Intr - 131701 131517  185  2  2   77   94   153 0.972  13.39
 5.02 Intr - 137957 137837  121  2  1   58   63    78 0.527   1.45
 5.01 Init - 142245 142213   33  0  0   72  106    17 0.507   1.82
 5.00 Prom - 146809 146770   40                              -3.75

 6.00 Prom + 155849 155888   40                              -2.25
 6.01 Init + 182912 182971   60  1  0   62   92    64 0.320   5.50
 6.02 Intr + 197378 197771  394  1  1   50   35   213 0.059   5.50
 6.03 Term + 217566 217666  101  1  2   57   36   107 0.132  -0.29
 6.04 PlyA + 218057 218062    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  75063  74944  120  0  0   46   98    90 0.823   6.04
S.002 Init +  90640  90796  157  0  1   58  105    91 0.892   7.92
S.003 Term - 100151  99998  154  1  1   86   44    97 0.891   1.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:52482157_52713859|GENSCAN_predicted_peptide_1|85_aa
MLRAKTVRLLEENTGGKLHDTEFGTDFLELTPGAQAIKEKEYYLASKEKEILKDVTTWMN
LEEILKDVTTWMNLEDITPYEISQS

>gi568815583r:52482157_52713859|GENSCAN_predicted_CDS_1|258_bp
atgttaagagctaaaactgtaagactcttagaagaaaatacaggaggaaaacttcatgat
actgaatttggcactgatttcttggagctgacaccaggagcacaggcaataaaagaaaaa
gaatattatttggcctcaaaagagaaggaaattctgaaagatgtcacgacatggatgaac
cttgaggaaattctgaaagatgtcacgacatggatgaaccttgaggacattacgccatat
gaaataagccagtcatga

>gi568815583r:52482157_52713859|GENSCAN_predicted_peptide_2|224_aa
MGFGDLKSPAGLQVLNDYLTDKSYIKGYVPSQADVAVFEAVPRPLPADLCHALCWYNHIK
SYEKEKASLPGVKKALGKYGPADVEDTTGSGATDSKDDDDIDLSGSDDEEESEEAKRLRE
ERLAQYESKKAKKPALVSKSSILLDVKSWDDETDMAKLEGVRSIQADVLVWDSSKLVPVG
YRIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQPMDVAAFNKI

>gi568815583r:52482157_52713859|GENSCAN_predicted_CDS_2|675_bp
atgggttttggagacctgaaaagccccgccggcctccaggtgctcaatgattacctgaca
gacaagagctacatcaaggggtatgtgccatcacaagcagatgtggcagtatttgaagca
gtgccccgcccactgcctgccgacttgtgtcatgctctatgttggtataatcacatcaag
tcttacgaaaaggaaaaggccagcctgccaggagtgaagaaagctttgggcaagtatggt
cctgcagatgtggaagacactacaggaagtggagctacagatagtaaagatgatgatgac
attgatctctctggatctgatgatgaggaagaaagtgaagaagcaaagaggctaagggaa
gaacgtcttgcacaatatgaatcaaagaaagccaaaaaacctgcacttgtttccaagtct
tccatcttattagatgtgaaatcttgggatgatgagacagatatggcgaaattagagggc
gtcagaagcattcaagcagacgtcttagtctgggactcatctaaactagttccagtggga
tacagaattaagaaacttcaaatacagtgtgtagttgaggatgataaagttggaacagat
atgctggaggagcagatcactgcgtttgaggactatgtgcagcccatggatgtggctgct
ttcaacaagatctaa

>gi568815583r:52482157_52713859|GENSCAN_predicted_peptide_3|162_aa
MALVGLAWARRSRPLPSLTAGGEGRTAPVLDAGRGGSPPPPQPLRRPAMLPPLPPPPPPP
PCALWEREEAALQRCHRGCSGLSRAHAASHRLRAQSIIIISLPAGPAAASRPAEARKPAR
DVSPEGAAHPGRPHPEASPGPSAAEPSSRGSAAMARAVTVSE

>gi568815583r:52482157_52713859|GENSCAN_predicted_CDS_3|489_bp
atggcgctggtggggctcgcctgggcccggcgctcccgccccctccccagcctgacagct
ggcggcgagggccgcacagccccagtcctcgacgccggccgcggggggtcgccgccgccg
ccgcagccacttcggcggcccgcgatgctgcctccgctgccgccgccgccaccgccgccg
ccctgtgcattatgggagcgggaggaggctgcgctccagcgctgccaccgcggctgctct
gggctctctcgggctcacgctgcctcccatcggctacgagcacagagcatcatcatcatc
agcctgccagccggccccgccgccgcctcgcgccctgccgaggcccggaaacccgcccgg
gacgtgagccccgagggcgcggcacaccccgggcgcccccaccccgaagcgagcccgggg
ccctctgctgcggagcctagctcccgcggtagcgcagccatggcacgggctgttactgtg
tccgaataa

>gi568815583r:52482157_52713859|GENSCAN_predicted_peptide_4|153_aa
MAKTGQGTAQAVALESASPKLWQFPVGAQKSRIEVWESPSRFQRMYGNAWMSRQKSAAGA
GPSWRTSARAVQKGNVRSEPPLWVPTGALPTGVVRRGPLSSRPQHASFPHAVPPHVLQPQ
TTSHPYHHLDLSMNYLEFFLADLNVTYAQYLVL

>gi568815583r:52482157_52713859|GENSCAN_predicted_CDS_4|462_bp
atggctaaaacaggtcaaggtacagctcaggctgttgctttagagagtgcaagccccaag
ctttggcaatttcctgtgggtgcacagaagtcaagaatcgaggtttgggaatctccatct
agatttcagaggatgtatggaaatgcctggatgtccaggcagaagtctgctgcaggagca
gggccctcatggagaacctctgctagggcagtgcagaagggaaatgtgaggtcagagccc
ccactctgggtccccactggggctctgcctactggggttgtgagaagagggccactgtcc
tccagaccccagcatgcttcatttcctcatgctgttcccccacatgtccttcaaccacaa
acgacttcccatccatatcaccacttagatctctcaatgaactatttggagttctttctc
gctgacttaaatgtcacctatgcccagtacctagtcctctga

>gi568815583r:52482157_52713859|GENSCAN_predicted_peptide_5|1068_aa
MASVNSGEENKNRWGILRSCYTPEPEEHAKAVSLIIAPRQPGASTILIEVLDTLDEYFEY
DAEEFLVSLALLITEGRTPECSVKGRTESFHCPPAQSCYPVTTKHECSDKLAQCRQARRT
RSEVTLLWKNNLPIMVEMMLLPDCCYSDDGPTTEGIDLNDPAIKQDALLLERWILEPVPR
QNGDRFIEEKTLLLAVRSFVFFSQLSAWLSVSHGAIPRNILYRISAADVDLQWNFSQTPI
EHVFPVPNVSHNVALKVSVQSLPRQSNYPVLTCSIHTNIGLYEKRIQQHKLKTHQHHNPN
EAEQCGTNSSQRLCSKQTWTMAPESVLHAKSGPSPEYTAAVKNIKLYPGTGSKSDHGTSQ
ANILGFSGIGDIKSQETSVRTLKSFSMVDSSISNRQSFWQSAGETNPLIGSLIQERQEII
ARIAQHLIHCDPSTSHVSGRPFNTQESSSLHSKLFRVSQENENVGKGKEAFSMTFGSPEF
SSPEDTNEGKIRLKPETPRSETCISNDFYSHMPVGETNPLIGSLLQERQDVIARIAQHLE
HIDPTASHIPRQSFNMHDSSSVASKVFRSSYEDKNLLKKNKDESSVSISHTKCSLLGDIS
DGKNLVPNKCFTSFKNNSKEKCSLKHQTRNQCQNNPSEIIQSTYQETQNKSSSLSTSSIL
SQHKENNLDLTSRFKEQEMSNGIDKQYSNCTTIDKQICTNKYKEKIINENYNPKFFGNLQ
SDDSKKNDSKIKVTVLEMSEYLNKYESMSSNKDSKRPKTCEQNTQLNSIENYLNKDNEGF
KCKKSDQLKNEQDKQEDPTNEKSQNYSQRRSIKDCLSTCEQPKNTEVLRTTLKHSNVWRK
HNFHSLDGTSTRAFHPQTGLPLLSSPESVLNYRFDPLGIVDGFTAETLFNPNKTVVKMFV
VIYDLRDMPANHQTFLRQRTFSVPVKQEVKRSVNKENIRHTEERLLRYLIHLRGSTMSAE
VPEAASAEEQKEMEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKGQKYFDSGD
YNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG

>gi568815583r:52482157_52713859|GENSCAN_predicted_CDS_5|3207_bp
atggcttctgtaaattctggggaagagaacaaaaacaggtggggaattttaagaagctgc
tacactccagaaccagaagagcatgcaaaagcagtcagtctgatcatagctcctagacaa
cctggtgcaagcacaatcctcattgaggtcttagatactctggatgaatattttgaatat
gatgcagaggagttcttggtctctttggccttgctgataacagaaggacgaacacctgaa
tgttctgtaaaaggtcgaacagaaagctttcattgccctccagcacagtcttgttaccca
gtaactaccaaacatgaatgtagtgacaagctggcccagtgccgccaagccagacgaact
aggtctgaggtcacattgttgtggaagaataaccttccaatcatggtggaaatgatgcta
ctaccagactgctgctacagcgatgatgggcccaccacagagggaattgatctaaatgat
cctgcgattaagcaagatgcattattattagaaagatggatcttggagccagttcctcga
cagaatggtgaccgatttattgaagagaagacgcttctgttggctgtccgctcatttgtg
tttttttctcagttaagtgcatggctgagtgtttctcatggtgctattccacgaaatatt
ctctacagaatcagtgctgctgatgtagacctacagtggaatttttcacagactccaatt
gagcatgtgtttcctgttcccaatgtttctcacaatgttgccttgaaagtcagtgttcag
tccttgcccagacaatctaattatccagttttgacgtgcagtattcacactaatattggc
ctttatgagaaaagaattcaacaacataaacttaaaactcatcagcaccataacccaaat
gaagcagaacaatgtggtacaaacagttcacagcgtctgtgtagcaaacaaacttggacc
atggcacctgaaagtgtgttacatgcaaaaagtggcccaagtccagaatatactgcagct
gtcaaaaatatcaaactatatccaggcactggcagtaaatctgaccatgggacatctcaa
gccaatattctaggctttagtggtataggtgatataaaatcacaagaaacatcagtgaga
actttaaaatcattttcaatggttgattccagtatctctaaccgccagagtttctggcag
tcagctggtgagactaaccctttaataggctctttaattcaggagcggcaagaaatcatt
gcaagaattgcccaacatttgattcattgtgatccaagcacttcacatgtttctggacgt
ccatttaatactcaagagtctagttcactccattcaaaacttttccgggtttcacaagaa
aatgagaacgtgggaaaaggtaaagaagctttctccatgacttttggtagtccagagttt
agttccccagaagacaccaatgaggggaaaattcgactaaaaccagaaactcctcgaagt
gaaacttgtatttctaatgacttttattctcatatgcctgttggagagactaatcctttg
ataggctctttactccaggagcggcaagatgttattgcaaggattgctcaacacttggag
cacattgatccaacagcatcacatatcccccggcagtcattcaacatgcatgactccagt
tcggttgcatctaaagtgtttaggagttcatatgaagacaaaaatttgttgaagaaaaat
aaggatgagtcctcagtttccatttctcacacaaaatgttccttgttaggagacatcagt
gatgggaaaaacttagtacctaataaatgttttacttcttttaaaaataatagtaaagaa
aagtgttctttgaaacatcaaacaagaaatcagtgtcagaacaatcctagtgaaatcatc
caaagtacgtatcaggagacacagaacaaaagttctagtttatcaacttcctcaattttg
tctcagcacaaagaaaataacttagatttgacaagcagattcaaggagcaagaaatgagc
aatggaattgataaacagtattcaaattgcaccactattgacaaacagatttgtacaaat
aagtataaggaaaaaataataaatgagaactataatccaaaattctttggcaatcttcag
tctgatgattccaaaaaaaatgactcaaaaataaaagttactgtgttggaaatgtctgaa
tatttgaacaaatatgaaagcatgtcctcaaataaagactcaaaaaggcctaagacatgt
gagcaaaatactcaacttaatagcatagagaattatctcaataaagataatgaaggtttc
aaatgtaaaaagtcagaccaattaaaaaatgaacaagataagcaagaagatccaactaat
gaaaaatcccaaaactattctcagagaagaagtataaaagactgtttgtctacatgtgag
caaccaaaaaatacagaggtattgaggactacactgaaacattcaaatgtgtggcgaaaa
cataattttcattccttggatggaacttcaaccagagcctttcatcctcaaactggattg
cctcttctttcaagccctgaatctgtcttgaactatcgtttcgatcctctcggcattgtt
gatggttttactgccgagaccttatttaatcctaataagactgtggtgaagatgtttgtt
gtgatatatgatttacgagatatgccagccaatcatcagacattcctacgacaaagaact
ttttctgtacctgttaaacaagaagtgaagagaagtgttaataaagagaacatccgacac
acagaagaacggttattacgctacctcatacatctgagagggagcactatgtctgcggaa
gtccccgaggcagcctccgcggaggagcagaaggaaatggaagataaagtgactagtcca
gagaaagcagaagaagcaaaattaaaagcaagatatcctcatctgggacaaaagcctgga
ggttcagatttcttaaggaaacggttgcagaaagggcaaaaatattttgattctggggat
tacaacatggctaaagcaaaaatgaagaacaagcaacttcctactgcagctccggataag
acggaggtcactggtgaccacattcccactccgcaagaccttcctcaacggaagccgtcc
cttgttgctagcaagctggctggctga

>gi568815583r:52482157_52713859|GENSCAN_predicted_peptide_6|184_aa
MDIEVGTIDTGDYEGNGGRQVPGGCEGAGDGGWETPAESRKPETSQALRLRSQPAEARLD
SETRNRSCAIRAQGNWGDVIQRPAPDVEDNYSRRLLLLLLLLLLLLLPPPPPSPPPPPPP
PPPGMLAQSCDRAPSGLQRIMEPGFNVTGTGAGILCKYSEYDIKWECAQVNLQRITMPYC
SIRI

>gi568815583r:52482157_52713859|GENSCAN_predicted_CDS_6|555_bp
atggacatagaagtgggaacaatagacactggggactacgaggggaatggagggaggcag
gtgcccggcgggtgcgagggcgctggagatggcggctgggagacaccagcagagtcccgg
aagcccgagacgtcccaggcacttcggttgcgctcccagccggcagaggcgcgcctggat
tctgagaccaggaatcggagctgcgctattagagcgcagggtaactggggagatgtcatc
caaaggcctgccccagacgtggaggataattatagtcgtcgtctcctcctcctcctcctc
ctcctcctcctcctcctcctcccccctccccctccttccccccctcctcctcctcctcct
cctcctcccgggatgctggcacagagttgtgatcgagccccaagtggattgcagcgcata
atggaacccgggtttaatgtgaccgggacgggggcgggcatcctgtgcaagtactcagaa
tatgatatcaagtgggagtgtgcccaggttaacctgcagaggatcaccatgccttactgt
agcattcggatttag