GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:29:09

Sequence gi568815588r:95215062_95537556 : 322495 bp : 43.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6874   6913   40                              -3.26
 1.01 Init +  13649  13709   61  1  1   89   32    86 0.563   4.51
 1.02 Term +  17589  17905  317  1  2   78   42   119 0.333   1.40
 1.03 PlyA +  17909  17914    6                               1.05

 2.10 PlyA -  18231  18226    6                               1.05
 2.09 Term -  23050  22864  187  0  1   80   52   227 0.815  15.26
 2.08 Intr -  23624  23507  118  0  1  105   56    78 0.988   5.82
 2.07 Intr -  26457  26371   87  1  0   53   99    55 0.745   3.04
 2.06 Intr -  32305  32154  152  0  2   74   84   159 0.425  13.91
 2.05 Intr -  49002  48803  200  0  2  105  103   207 0.870  22.05
 2.04 Intr -  53801  53717   85  1  1   54  111    38 0.561   2.52
 2.03 Intr -  56723  56572  152  2  2  126   72    20 0.506   3.16
 2.02 Intr -  75861  75759  103  2  1   61   94   131 0.776  11.18
 2.01 Init -  77759  77671   89  2  2   68  110    50 0.819   5.31
 2.00 Prom -  82566  82527   40                              -3.06

 3.34 PlyA -  83212  83207    6                               1.05
 3.33 Term -  89112  88919  194  1  2   77   32    79 0.301  -1.22
 3.32 Intr -  98437  98309  129  2  0  111   96   -37 0.254   0.07
 3.31 Intr - 103371 103259  113  2  2   66   91   129 0.902  11.02
 3.30 Intr - 109174 109147   28  2  1   77   78    16 0.035  -3.33
 3.29 Intr - 121891 121471  421  1  1   39   59   291 0.343  14.82
 3.28 Intr - 124266 124072  195  0  0   91   70   185 0.897  16.61
 3.27 Intr - 126349 126224  126  1  0  103  121   108 0.999  16.48
 3.26 Intr - 126617 126503  115  1  1   74   71    58 0.845   3.15
 3.25 Intr - 131391 131345   47  0  2   90  106    28 0.869   2.01
 3.24 Intr - 136315 136148  168  1  0   47   58   173 0.774  10.34
 3.23 Intr - 139906 139821   86  2  2   90   84    61 0.971   5.44
 3.22 Intr - 141999 140566 1434  1  0   71   23   855 0.242  66.85
 3.21 Intr - 142742 142570  173  1  2   51   86    47 0.146   0.39
 3.20 Intr - 165571 165441  131  1  2   17   86    77 0.106  -0.11
 3.19 Intr - 166738 166624  115  0  1   74   50    77 0.501   2.95
 3.18 Intr - 169053 168924  130  1  1   75  115     0 0.153   1.15
 3.17 Intr - 169224 169177   48  1  0  101   98     0 0.094   0.95
 3.16 Intr - 179612 179550   63  0  0   69   86    46 0.611   1.19
 3.15 Intr - 180014 179940   75  0  0   80   76    67 0.848   4.19
 3.14 Intr - 182222 182159   64  2  1  111   69    49 0.772   3.59
 3.13 Intr - 184128 183956  173  1  2   72   79    95 0.655   6.66
 3.12 Intr - 191086 191057   30  2  0   87   96    14 0.181   0.20
 3.11 Intr - 195716 195572  145  2  1   90   94    34 0.463   4.06
 3.10 Intr - 199594 199433  162  1  0   93   77    52 0.556   4.77
 3.09 Intr - 201088 200504  585  1  0   76   39   203 0.331   7.05
 3.08 Intr - 207012 206900  113  1  2   68   96    98 0.968   8.70
 3.07 Intr - 211977 211924   54  1  0   97   75    46 0.483   3.15
 3.06 Intr - 217515 217387  129  1  0   84   85     2 0.335   0.17
 3.05 Intr - 219656 219561   96  0  0   98   70    43 0.725   3.48
 3.04 Intr - 222494 222378  117  0  0  124   86    87 0.689  12.54
 3.03 Intr - 226119 226065   55  0  1   74  119    27 0.038   2.95
 3.02 Intr - 286352 286282   71  0  2   43   94    63 0.717   1.30
 3.01 Init - 286822 286723  100  1  1   55  119    77 0.935   7.92
 3.00 Prom - 295172 295133   40                              -5.46

 4.05 PlyA - 295508 295503    6                               1.05
 4.04 Term - 299808 299688  121  2  1   66   42    83 0.531  -0.55
 4.03 Intr - 301136 301032  105  1  0   50   98    98 0.691   6.33
 4.02 Intr - 301751 301696   56  2  2   43  105    49 0.471  -0.12
 4.01 Intr - 318487 318451   37  0  1   89  119    15 0.161   2.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  36083  36014   70  2  1   90   64   154 0.954  12.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:95215062_95537556|GENSCAN_predicted_peptide_1|125_aa
MDEDGYFWWSGRVDDVANALENGTLHSQGVVYKLAFQLCLQQAIPSPFYAGHFWVVQIVI
DPLDSMVMCPLLCLLCSKMGPWSHKAMRDPALVDLKIFVSSESVVFEALWTAKANPIYLY
GSIPD

>gi568815588r:95215062_95537556|GENSCAN_predicted_CDS_1|378_bp
atggatgaagacggctacttctggtggtctggtagagttgatgatgttgccaatgcattg
gaaaatggcactctacactcacaaggggtcgtatataagctggcatttcaactatgtctt
caacaggccataccatcacccttttatgctggccatttctgggtggtgcagattgtgata
gatccactggactccatggtcatgtgcccactgctgtgcctcctttgcagtaaaatgggt
ccttggtcccacaaggccatgagggatcctgcgctagtggatctaaagatctttgtgtcc
tcagaaagtgttgtgtttgaggccctgtggacagcaaaggcaaacccaatatacctatat
gggtctattcctgactga

>gi568815588r:95215062_95537556|GENSCAN_predicted_peptide_2|390_aa
MGSMPSTVLGPGYQDEWVPRKLRRNWAQRGRAMTTQQIDLQGPGPWGFRLVGGKDFEQPL
AISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEHKV
WSPLVTEEGKRHPYKMNLASEPQEVLHIGSAHNRSAMPFTASPASSTTARVITNQYNNPA
GLYSSENISNFNNALESKTAASGVEANSRPLDHAQPPSSLVIDKESEVYKMLQEKQELNE
PPKQSTSFLVLQEILESEEKDASGIPFHCDNRNCSLGDKTAPSREPLTGGDPNKPSGFRS
VKAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQKGHF
FVEDQIYCEKHARERVTPPEGYEVVTVFPK

>gi568815588r:95215062_95537556|GENSCAN_predicted_CDS_2|1173_bp
atgggctctatgccaagcactgtgctggggcctgggtaccaggatgaatgggtgccaaga
aaactgcgaagaaactgggcccagagaggccgcgccatgaccacccagcagatagacctc
cagggcccggggccgtggggcttccgcctcgtgggcggcaaggacttcgagcagcctctc
gccatttcccgggtcactcctggaagcaaggcggctctagctaatttatgtattggagat
gtaatcacagccattgatggggaaaatactagcaatatgacacacttggaagctcagaac
agaatcaaaggctgcacagacaacttgactctcactgtagccagatctgaacataaagtc
tggtctcctctggtgacggaggaagggaagcgtcatccatacaagatgaatttagcctct
gaaccccaggaggtcctgcacataggaagcgcccacaaccgaagtgccatgccctttacc
gcctcgcctgcctccagcactactgccagggtcatcacaaaccagtacaacaacccagct
ggcctctactcttctgaaaatatctccaacttcaacaatgccctggagtcaaagactgct
gccagcggggtggaggcgaacagcagacccttagaccatgctcagcctccaagcagcctt
gtcatcgacaaagaatctgaagtttacaagatgcttcaggagaaacaggagttgaatgag
cccccgaaacagtccacgtctttcttggttttgcaggaaatcctggagtctgaagaaaaa
gacgccagtggcatcccctttcactgtgacaatcgaaactgctctctaggagacaaaact
gcccccagtagggaaccactgactggaggggatcccaacaagccctcaggattcagaagt
gttaaagctcctgtcactaaagtggctgcgtcgattggaaatgctcagaagttgcctatg
tgtgacaaatgtggcactgggattgttggtgtgtttgtgaagctgcgggaccgtcaccgc
caccctgagtgttatgtgtgcactgactgtggcaccaacctgaaacagaagggccatttc
tttgtggaggatcaaatctactgtgagaagcatgcccgggagcgagtcacaccacctgag
ggttatgaagtggtcactgtgttccccaagtga

>gi568815588r:95215062_95537556|GENSCAN_predicted_peptide_3|1894_aa
MLLRKSNIQKTDTQNVQARVPVKGRKKDPPGTAGLKDLRKAAICWEKACDQFLVSQQSSS
EPQLQTTCPATTMSSECDGGSKAVMNGLAPGSNGQDKGKVLGEKSGLVLEGISKATADPL
RARSISAVKIIPVKTVKNASGLVLPTDMDLTKICTGKGAVTLRASSSYRETPSSSPASPQ
ETRQHESKPGMAVAKRYHKKVNIEAVEDEWRLSSSADANGNAQPSSLAAKGYRSVHPNLP
SDKSQDRFAWQSPTIHNTYKDSLYLSSPKPYVPLGTPRQQNPSQPQPISVLLAAGSAPKG
VVCPGSLLPDSTFPSASSQPQQRYAATRTVYHKNVSSNPCHEAVGIKKVSSLYVPCLSNN
ICLAASENSSRVARDPAEGTPLEAAGTRAPAPGLVSRTAGTGKPPPAPPPDPPKLFFDIR
KDAVNRGESPSLGTQASFPDRWPHHSQPARASGSFAPISQTPPSFSPPPPLVPPAPEDLR
RVSEPDLTGAVSSTDSSPLLNEVSSSLIGTDSQAFPSVSKPSSAYPSTTIVNPTIVLLQH
NREQQKRLSSLSDPVSERRVGEQDSAPTQEKPTSPGKAIEKRAKDDSRRVVKSTQDLSDV
SMDEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQQTSEEDNP
YTPTYQFPASTPSPKSEDDDSDLYSPRYSFSEDTKSPLSVPRSKSEMSYIDGEKVVKRSA
TLPLPARSSSLKSSSERNDWEPPDKKVDTRKYRAEPKSIYEYQPGKSSVLTNEKMRSLCT
SYFKQKVQRGAQNFAFSPLLPFFGGSLLLEDTVRKKHRSIYSSNFHAVKRESDGAPGDLT
SLENERQIYKSVLEGGDIPLQGLSGLKRPSSSASTKVHSRTFNTSNALGPVCKHKKPLSA
AKACISEILPSKFKPRLSAPSALLQEQKSILLPSEKAQSCENLCVSGSLNDSKRGLPLQV
GGSIENLLMRSRRDYDSKSSSTMSLQEYSTSGRRPCPLSRKAGMQFTMLYRDMHQINRSG
LFLGSISSSSSVRDLASHFEKSSLALSRGELGPSQEGSEHIPKHTVSSRITAFEQLIQRS
RSMPSLDLSGRLSKSPTPVLSRGSLTSARSAESLLESTKLHPKEMDGMNSSGVYASPTCS
NMAHHALSFRGLVPSEPLSTCSDDVDRCSNISTDSREGSGGSVHGDFPKHRLNKCKGTCP
ASYTRFTTIRKHEQQQTSRQPEWRLDARGDKSTLLRNIYLMSPLPFRLKKPLHHHPRQPS
PGDSSGLLVGQKPDLPSQPHQDQPPSGGKPVVPTRLSSRHTMARLSRSSEPSQERPTALE
DYPRAINNGNSVPYSDHSLDRNNNPQSELAPSRGDSESPRHFIPADYLESTEEFIRRRHD
DKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEM
RPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEK
AQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQ
GIFPITYVDVIKRPLVKNPVDYMDLPFSSSPSRSATASPQASLHMNGDGGVHTPSSGIHQ
DSFLQLPLGSSDSVISQLSDAFSSQSKRQPWREESGQYERKAERGAGERGPGGPKISKKS
CLKPSDVVRCLSTEQRLSDLNTPEESRPGKPLGSAFPGSEAEQTERHRGGEQAGRKAARR
GFLRESLKMRFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVDTHPSSQIGVAIL
GGRVVYGTPGCLHISQNYPRTIVPKSRVFTGSTLGLHLFSYFLVPSSTLVSECPLYADLL
PGLSPGIQTPIYNRLLYISTEISHGCLKLKYIQN

>gi568815588r:95215062_95537556|GENSCAN_predicted_CDS_3|5685_bp
atgcttctgcggaagagtaacatccagaagactgacactcagaatgttcaggcaagagta
ccagtcaaaggcagaaaaaaagacccgcctggtactgctggtttgaaagatctcaggaaa
gcagccatttgctgggaaaaggcctgtgaccagttcctggtgtctcaacagagcagttca
gagccccagttgcagacgacttgtcctgccaccaccatgagttctgaatgtgatggtggt
tccaaagctgtgatgaatggcttggcacctggcagcaatgggcaagacaaaggtaaggtt
cttggagagaaatctggattggtactggaaggcatttctaaagcaactgccgacccttta
cgcgcacgctctatttctgctgttaaaatcattcctgtgaagacagtgaaaaacgcctca
ggcctagttctccctacagacatggatcttacaaaaatctgcactgggaagggagcggtg
actctccgggcctcgtcttcctacagggaaaccccaagcagtagccctgcgagccctcag
gaaacccggcaacacgaaagcaaaccaggaatggcagtagcaaaaaggtaccataagaag
gttaacattgaagcagttgaagatgagtggaggctttcttccagtgctgatgccaatgga
aatgcccagccctcttcactcgctgccaagggctacagaagtgtgcatcccaaccttcct
tctgacaagtcccaggaccgctttgcatggcagtcccccaccatccacaatacctataag
gattccctctacctgagctcaccaaagccttatgtcccactcggcacccccagacagcag
aacccctcacaaccccagcctatctctgtcctcctggcagctggatcggctcccaaaggt
gtggtgtgccctggttccttgcttccggactccacgttccccagtgcttcatcccaaccc
cagcagcgctatgcagccaccaggacagtttatcataagaatgtgagctctaacccatgt
catgaggcagttgggattaaaaaggtcagcagcttatatgtaccttgtttatccaataac
atttgcctggcggcgtcagaaaactcctctcgtgttgcacgtgaccctgccgaaggcact
cccttggaggctgcgggcacccgagcaccggctcccggccttgtctcccgcacagccggc
acaggaaaaccaccccctgctcctcctcctgaccctcccaagctattctttgacatccgt
aaagatgccgttaaccgtggcgagagtccttccctggggactcaggcttcgttcccagat
aggtggccccaccacagccagccagcccgcgcctctggctcctttgcccccattagccag
acgccaccatccttctcaccaccacctccgctggtccctcctgccccggaggacctccgc
agagtctcggagcctgacctcacgggagctgtttcgagtaccgattccagtcctctacta
aatgaagtttcttcttcccttattggaactgattcccaagcctttccatcagttagcaag
ccttcatccgcctatccctccacaacgattgtcaatcctactattgtgctcttgcaacac
aatcgagaacagcaaaaacgactcagtagcctttcagatcctgtctcagaaagaagagtg
ggagagcaggactcagcaccaacccaggaaaaacccacctcacctggcaaggctattgaa
aaaagagcaaaggatgacagtaggcgggtggtgaagagcactcaggacttaagcgatgtt
tccatggatgaagtgggcatcccactccggaacactgagagatcaaaagactggtacaag
actatgtttaaacagatccacaaactgaacagagacactcctgaagaaaacccttatttc
cctacgtacaaattccctgaacttcctgaaatccagcaaacttccgaagaggacaatcct
tacactcccacctaccagtttcctgcatctactcctagtcctaaatctgaagatgatgat
tcagatctgtactctcccagatactcattttctgaagacacaaaatctcccctttctgtg
cctcgctcaaaaagtgagatgagctacattgatggtgagaaggtagtcaagaggtcggcc
acactacccctcccagcccgctcttcctcactgaagtcaagctcagaaagaaatgactgg
gaacccccagataagaaagtagacacaagaaaatatcgtgcagagcccaagagcatttac
gaatatcagcctggcaagtcttccgttctgaccaacgaaaagatgcgttcactatgcacc
agttatttcaagcagaaagttcagagaggagcacagaatttcgccttctccccactactg
cccttctttggaggttctctgctgttagaagatactgtacgtaagaaacatagaagtata
tattcttccaacttccatgcagtgaagagggaatcagacggggctcctggggatctcact
agcttggagaatgagagacaaatttataaaagtgtcttggaaggtggtgacatccctctt
cagggcctgagtgggctcaagcgaccatccagctctgcttccactaaagtccatagccga
acgtttaacactagcaatgcgttaggccctgtgtgtaagcacaagaagcccctgtcagct
gcgaaggcctgcatttcggaaatccttccatccaaattcaaacccaggctctctgctccc
agcgctcttttgcaggaacagaagagtatcctcttgccctcagagaaggctcaaagctgt
gagaacctttgtgtttctggttctttaaatgattccaaaagaggcctccccctccaagtg
ggagggagcattgagaacctgctcatgcgctcccgacgggattatgacagcaagtcgagc
agtaccatgagcctccaggagtacagcaccagcggcaggaggccctgtcctctctcaaga
aaggctgggatgcagttcaccatgctttatcgggacatgcaccagatcaaccgatctggc
ctcttcctgggctccatctcctcctcctcgagtgtgcgggatcttgcctcccactttgaa
aagagtagcctggcattgtccaggggtgagctgggccccagccaggagggctcggaacac
atccccaagcacaccgtctcttcccgcatcaccgcttttgagcagctgattcagcggtcc
cgttccatgccatccctggacctgtccggaaggctgagcaagtctcccacacctgtgctg
tcccggggcagcctgacctcagcccgctcggccgagtccctacttgagtcaaccaagctc
catcccaaggagatggatgggatgaactccagtggggtctatgcttccccaacatgtagc
aatatggcacaccatgccttgagcttcaggggccttgtgccttctgagcctctctccacc
tgctctgatgacgtggaccgctgttcaaatatctccactgacagcagagaaggcagtggc
ggcagtgttcatggagatttccccaaacatcgcctcaacaagtgcaagggcacctgcccg
gcctcatacacccgcttcaccaccatccggaagcatgagcagcagcagacctctagacag
cctgagtggcgcctggatgccagaggggacaagagcaccctcctcaggaacatctaccta
atgagcccccttcctttccggctgaaaaagcccctccaccaccaccccagacaaccttcc
cctggtgactcctcaggcctcctggtgggccagaagccagacctccccagtcagccccat
caggaccagcccccttctggggggaagcccgtggttcccacacgcctgtcttcccgacac
accatggccaggcttagccgcagctcagagccctctcaggagagacccacggccctggag
gactacccaagggccattaataatggaaactccgtgccatactcagaccacagcctggac
aggaacaacaacccacaaagtgaactggcaccatcccgtggagattcagaatcgccaaga
cattttataccagctgattacttggaatccacggaagaatttattcgaagacgtcatgat
gataaagagaaacttttagcggaccagagacgacttaaacgcgagcaagaagaggctgat
attgcagctcgacgccacacaggcgtcattccgacgcaccatcagtttatcactaatgag
cgctttggggacctcctcaatatagacgatactgcaaaaaggaaatctgggtcagagatg
agacctgccagagccaaatttgactttaaagctcagacactaaaggagcttcctctgcag
aagggagatattgtttacatttataagcaaattgatcagaactggtatgaaggagaacac
cacggccgggtgggaatcttcccacgcacctacatcgagcttcttcctcctgctgagaag
gcacagcccaaaaagttgacaccagtgcaggttttggaatatggagaagctattgctaag
tttaactttaatggtgatacacaagtagaaatgtccttcagaaagggtgagaggatcaca
ctgctccggcaggtagatgagaactggtacgaagggaggatcccggggacatcccgacaa
ggcatcttccccatcacctacgtggatgtgatcaagcgaccactggtgaaaaaccctgtg
gattacatggacctgcctttctcctcctccccaagtcgcagtgccactgcaagcccacag
gcctcccttcacatgaatggagacggtggtgtccacacgccatcttcaggcatccaccaa
gatagcttcttgcagctgccgctggggagctctgatagtgtcatctcccagcttagtgat
gcctttagcagccagagcaagaggcagccatggcgcgaagagagtggacaatatgagagg
aaagcagagaggggggcaggcgaaagaggccctggtggacccaagatctctaagaagagc
tgcttgaagccttcagacgtggtcaggtgcctgagtactgaacagagactctcagatctc
aacacccctgaggagagccggcccggcaagcccctgggtagcgcttttccaggaagtgag
gctgagcagacagagcggcatagaggtggcgagcaggcggggaggaaagctgctcggaga
gggtttctgagggagtcactgaagatgagatttagctatcaagcattatatagctatata
ccacagaatgatgatgagttggaactccgcgatggagatatcgttgatgtcatggaaaaa
tgtgacgatggatggtttgttgatacacatccaagctcacaaataggagtagcaattcta
ggtggtagggttgtgtacggaacccctggctgtctgcatatatctcagaattaccccagg
accattgtcccaaagtctagagtctttacaggctccacccttggcctccaccttttttcc
tacttcctggtgccctcatccactcttgtgtctgaatgtcctctatatgctgatctcttg
cctggactctcccctggaatccagactcctatatacaaccgcctgctctacatctccact
gaaatatctcatgggtgcctgaaacttaaatatatccaaaactaa

>gi568815588r:95215062_95537556|GENSCAN_predicted_peptide_4|106_aa
XFSQVKKWDGVSLRGIENPELMEDGLGNSHLRFPGNAAGLVTTPEELHYPDLEPPGPAGA
SDLDSDSVFHRYSASYTLYFCLKAQYESEVEVTFVAHTWFLLTTSL

>gi568815588r:95215062_95537556|GENSCAN_predicted_CDS_4|321_bp
nntttttcacaagtgaaaaagtgggatggtgtttctctgagaggcattgaaaatccagaa
ttaatggaagatggtcttggaaatagtcacttgaggttcccaggcaatgctgctgggctg
gtgaccacacctgaagaactacactacccagatctggagccaccaggcccagctggtgcc
tcagacctagacagtgacagtgtcttccatcgatattctgcctcatatacactctacttc
tgcctcaaggcccagtatgaatctgaagtcgaagtgacttttgtagcccatacttggttc
ctgctcacaacttctctatga