GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:23:09

Sequence gi568815591f:129334473_129583066 : 248594 bp : 43.59% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11576  11622   47  1  2   69  116     9 0.111   1.95
 1.02 Intr +  33998  34079   82  2  1   80  101    20 0.003   2.14
 1.03 Intr +  37297  37379   83  0  2  114   71    27 0.200   2.04
 1.04 Intr +  41370  41454   85  0  1   22   94    55 0.127  -0.68
 1.05 Intr +  45169  45277  109  0  1   78  109    84 0.864   9.36
 1.06 Intr +  54584  54727  144  0  0   64   98   155 0.723  14.35
 1.07 Intr +  55162  55262  101  2  2   75   68    34 0.890  -0.07
 1.08 Intr +  62750  62852  103  1  1   97   83   119 0.881  12.05
 1.09 Intr +  65818  65912   95  2  2  115   64    44 0.883   4.38
 1.10 Intr +  68907  69013  107  2  2   66  110    76 0.973   6.61
 1.11 Intr +  70625  70741  117  2  0  103   30   109 0.977   6.18
 1.12 Intr +  71364  71427   64  0  1  104   57    52 0.983   2.42
 1.13 Intr +  71906  71994   89  1  2  138  107    81 0.745  13.77
 1.14 Intr +  75004  75074   71  1  2   44   80    93 0.191   2.93
 1.15 Intr +  79122  79216   95  1  2  111   83    77 0.059   9.18
 1.16 Intr +  88323  88466  144  2  0  108   94    70 0.670  10.08
 1.17 Intr +  90402  90470   69  2  0   62  110    24 0.718   1.38
 1.18 Intr +  90591  90669   79  2  1  102  106   103 0.997  12.62
 1.19 Term +  91971  92203  233  1  2   68   46   152 0.788   5.64
 1.20 PlyA +  92328  92333    6                               1.05

 2.00 Prom +  93103  93142   40                              -7.56
 2.01 Init + 100001 100194  194  1  2   93   45   259 0.663  20.54
 2.02 Intr + 102128 102173   46  2  1   47   50    63 0.075  -3.19
 2.03 Intr + 105550 105619   70  0  1   67   80    66 0.114   2.45
 2.04 Intr + 109552 109626   75  2  0  108   86    68 0.076   8.09
 2.05 Intr + 117141 117275  135  1  0   59  113   157 0.695  15.84
 2.06 Intr + 118755 118875  121  1  1  101   24   134 0.965   7.85
 2.07 Intr + 119670 119738   69  0  0   94  109    61 0.991   7.10
 2.08 Intr + 119949 120055  107  0  2   79   60    71 0.982   3.26
 2.09 Intr + 120772 120899  128  2  2  130  101    73 0.997  13.20
 2.10 Intr + 121967 122170  204  1  0  116   51   174 0.996  15.90
 2.11 Intr + 123743 123978  236  1  2  116   96   229 0.886  22.99
 2.12 Intr + 124240 124305   66  1  0   59   92    94 0.865   4.92
 2.13 Intr + 125045 125108   64  2  1   79   62    14 0.398  -3.38
 2.14 Intr + 125829 125900   72  2  0   80   85   123 0.987  10.80
 2.15 Intr + 128494 128568   75  0  0   46   91    65 0.829   2.31
 2.16 Intr + 129843 129895   53  2  2   95   68   101 0.746   6.51
 2.17 Intr + 130140 130266  127  0  1   91   99    82 0.868  10.28
 2.18 Intr + 131395 131523  129  0  0   53   71    61 0.734   1.79
 2.19 Intr + 136115 136243  129  1  0   42  107    91 0.672   7.29
 2.20 Intr + 146313 146417  105  2  0   58  101    58 0.920   4.51
 2.21 Intr + 148370 148574  205  1  1   48  101   184 0.952  14.47
 2.22 Intr + 151107 151309  203  1  2   97   22   147 0.147   8.00
 2.23 Term + 177775 177969  195  0  0   39   48   221 0.483  10.61
 2.24 PlyA + 178425 178430    6                               1.05

 3.00 Prom + 183035 183074   40                              -3.16
 3.01 Init + 187649 187708   60  1  0   86  113    10 0.346   4.56
 3.02 Intr + 195149 195271  123  1  0   97   26    61 0.088   1.58
 3.03 Intr + 198486 198552   67  2  1   49  131    -6 0.005  -1.72
 3.04 Term + 216137 216318  182  0  2  115   45   122 0.864   8.37
 3.05 PlyA + 217428 217433    6                               1.05

 4.00 Prom + 219517 219556   40                              -4.46
 4.01 Init + 224032 224145  114  0  0   53   81   117 0.906   7.71
 4.02 Intr + 232032 232098   67  2  1   67   33    80 0.043  -1.12
 4.03 Intr + 248117 248293  177  0  0    6  116   179 0.039  12.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 248030 248293  264  0  0   55  116   199 0.877  16.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:129334473_129583066|GENSCAN_predicted_peptide_1|638_aa
MVTEKIIREDLWDKRRTYLTQACTMEKWDGNEGTSAFHMPEWMEIWLIDFHEYPASLMPD
ILLARSNPFHRGGSGAGNVTMLGSKKKYIVNGNSGIKAQIQFADQKQEFNKRPTKIGRRS
LSRSISQSSTDSYSSAASYTDSSDDETSPRDKQQKNSKGSSDFCVKNIKQAEFGRREIEI
AEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYST
LNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNVEGWQPNMILDDGGDLTHWIYKKYP
NMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLK
RTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNE
VIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVWGLLWLMLYLLYVFQA
SLRTPELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLSCSTVPTFVLSITATTQALALI
ELYNAPEGRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPNY
YRCLGLPRNQGHLGSDELPALELVFASPTTYAYMNSEK

>gi568815591f:129334473_129583066|GENSCAN_predicted_CDS_1|1917_bp
atggtaacagaaaagattatcagagaggatttgtgggataagagaaggacatatcttacc
caagcctgcactatggagaagtgggacggtaatgagggcacctcagcttttcacatgcct
gagtggatggaaatctggttgattgactttcatgagtatccagccagcttgatgcccgat
attcttttggcaagaagtaatccttttcatagaggtggcagtggggctggtaatgtcact
atgctgggcagcaagaagaaatacattgttaatggcaactctgggattaaggcccagatc
cagtttgctgaccagaagcaagaattcaacaaacgtcccaccaaaattggacgtcgctct
ttgtctcgttccatttctcagtcatctactgacagctacagctcagcggcttcatataca
gatagctctgatgatgagacatcgcccagggacaagcagcaaaagaactctaagggaagc
agtgacttctgtgttaagaacatcaaacaggcagagtttggacgaagagaaattgaaatt
gctgaacaagaaatgcctgcattgatggctttgaggaagagagctcaaggagaaaagcct
ttggctggagccaaaatcgtgggttgcacacacatcactgctcagactgctgtgcttatg
gaaactctgggtgctctgggggcccagtgccgatgggctgcctgcaacatctattccact
ctcaatgaagtggctgctgctctagcagaaagtggatttcctgtttttgcctggaaggga
gagtcagaagatgacttttggtggtgtatcgatagatgtgtgaatgtggagggctggcag
ccaaacatgatcttggatgatggaggggatcttacccactggatttataaaaagtatccc
aacatgtttaagaaaatcaagggcatagtagaggagagtgttactggagttcacaggctg
taccaactgtccaaagctgggaagctgtgtgttccagccatgaatgtcaatgactcagtc
accaaacagaaatttgacaacctctactgttgccgtgaatcaattcttgatggacttaaa
aggacaacagacatgatgtttggtggaaagcaagtggtagtctgtggctatggagaggtg
gggaaagggtgctgtgctgccctgaaagccatgggctccattgtgtatgtaactgaaatt
gaccccatctgtgccctgcaagcctgtatggatggatttcgactggtgaaattaaatgag
gtcatccgacaagtggacattgttattacctgtacaggtaacaagaatgtggtaaccaga
gagcacttggaccgtatgaagaatagctgcatcgtttgtaacatgggacattccaacaca
gagattgacgtgtggggcttgctatggctaatgctgtacttgctgtatgtgttccaggcg
agtctgcggacaccagaactgacctgggagcgagtgagatctcaagttgaccatgtgata
tggcctgatggcaagaggatagtactgctggcagagggccgcctgctgaaccttagctgc
tccacagtgcctacatttgtgctctcaatcactgctactactcaggctcttgccttgata
gagctttacaatgctcctgagggtcgctataagcaggatgtctacctgttgcccaagaag
atggatgagtatgtggccagcctacacctgcctacctttgatgcccacttgacagagctg
acagatgaacaggccaagtatctgggactcaacaagaatgggcccttcaagcctaattac
tacaggtgccttgggctccccagaaatcagggacacctgggcagtgatgagcttcctgca
ctggaattggtctttgcatccccaaccacatatgcttacatgaactcagaaaaatga

>gi568815591f:129334473_129583066|GENSCAN_predicted_peptide_2|935_aa
MEDPAAPGTGGPPANGNGNGGGKGKQAAPKGREAFRSQRRESEVRSPESFGWGPETPAGG
KRRLRTPFTCQYIPYYHSTQGSVDCPTLEFEYGDADGHAAELSELYSYTENLEFTNNRRC
FEEDFKTQVQGKEWLELEEDAQKAYIMGLLDRLEVVSRERRLKVARAVLYLAQGTFGECD
SEVDVLHWSRYNCFLLYQMGTFSTFLELLHMEIDNSQACSSALRKPAVSIADSTELRVLL
SVMYLMVENIRLERETDPCGWRTARETFRTELSFSMHNEEPFALLLFSMVTKFCSGLAPH
FPIKKVLLLLWKVVMFTLGGFEHLQTLKVQKRAELGLPPLAEDSIQVVKSMRAASPPSYT
LDLGESQLAPPPSKLRGRRGSRRQLLTKQDSLDIYNERDLFKTEEPATEEEEESAGDGER
TLDGELDLLEQDPLVPPPPSQAPLSAERVAFPKGLPWAPKVRQKDIEHFLEMSRNKFIGF
TLGQDTDTLVGLPRPIHESVKTLKQHKYISIADVQIKNEEELEKCPMSLGEEVVPETPCE
ILYQGMLYSLPQYMLRTLDLEGDTSASDWLPSITVLQSMKLGIDVNRHKEIIVKSISTLL
LLLLKHFKLNHIYQKSESSLLVEEQVLRVQRGFCRVYVHGPINQGIFPLSYIRRHLWIQP
IPAVAIYLKPVLISASYSISVLDYPCCTIQDLPELTTESLEAGDNSQFCWRNLFSCINLL
RLLNKLTKWKHSRTMMLVVFKSAPILKRALKVKQAMLQLYVLKLLKLQTKYLGRQWRKSN
MKTMSAIYQKVRHRMNDDWAYGNDIDARPWDFQAEECTLRANIEAFNSRRYDRPQDSEFS
PVDNCLQSVLGQRLDLPEDFHYSYELWLEREPAKGKKGKGQGKSHGKKQKKPEVDILSPA
AMLNLYYIAHNVADCLHLRGFHWPGAPKGKKGRSK

>gi568815591f:129334473_129583066|GENSCAN_predicted_CDS_2|2808_bp
atggaggaccccgccgcgcctgggaccgggggcccgcccgcaaatggcaatggcaacggc
ggcggcaaagggaagcaggcggcgcccaagggccgcgaagcgttccgaagccagcggcgg
gagtcagaggtgaggagcccggaaagcttcggctggggcccggagacgcccgccggcggg
aagcggcggctgaggactccttttacctgccagtacatcccctattaccacagtacccag
ggctctgtggactgtcccactctggagtttgagtatggagatgcagatgggcatgcagcc
gagttgtcagaattgtatagttacactgagaacctggaattcaccaataacaggaggtgc
tttgaagaagatttcaagactcaagtgcagggcaaggaatggctggagttggaagaagat
gcccaaaaggcctatataatgggactcttggaccggctagaggtggtcagtagggaacgg
cggctgaaggtggcccgggctgttctctacctggcccaaggtacttttggggaatgtgat
tcagaggtcgatgtgctacactggtccaggtacaactgcttcctgctgtatcagatgggg
accttctccaccttcctggagctactccacatggaaattgacaacagccaggcctgtagc
agtgcccttcggaaaccagctgtctccatagctgatagcacagagctcagggtgctgctg
agtgttatgtacctaatggtggaaaatattcgcctggagcgagagacagacccctgtggg
tggagaacagcccgggagaccttccgcactgaattaagcttctccatgcataatgaggag
ccttttgcccttttactcttctccatggttaccaagttctgcagtggcctggctcctcac
ttccccataaagaaggtcctgctcctgctctggaaggtggtcatgtttaccctcggtgga
tttgagcatctgcagactctcaaagtacagaagcgggcagaattgggcctgcctccactg
gctgaagacagtatccaggtggtgaagagcatgcgtgctgcctccccgccctcttacact
cttgacctgggagagtctcagctggcacccccaccctccaagctgcgaggccgccgtggc
tctcgaaggcaactcctcactaagcaggacagcctggacatctacaatgaaagggatctc
ttcaagactgaggagcccgccacagaggaggaagaggagtctgctggtgatggagaacga
accttggatggagagctagacctgctagagcaggaccctctggtgccacctccaccctca
caggcacccctctctgctgagcgggtggcttttcccaagggcctgccctgggccccaaag
gtcagacagaaggacattgagcacttcttggagatgagcaggaacaagttcatcggattc
accctggggcaggacacagatacattggttggattacccaggcccatccatgagagtgtg
aagaccctaaagcagcacaagtatatctccatcgcagatgtgcagatcaagaatgaagag
gagctggagaagtgccctatgtctttgggggaagaggtggtaccagagacgccatgtgaa
atcctctaccagggaatgctgtacagccttccgcagtatatgctcagaactctggatctg
gagggtgacaccagtgccagcgactggctgcccagcatcactgttctccagagcatgaag
ctgggcatcgatgtgaacaggcacaaggagattattgtaaagagtatctctaccctgctt
ctgctactcctcaaacacttcaaactcaaccatatctaccagaagtcagaatcaagcttg
ctggtagaagagcaggtcctcagagtacagagaggcttctgtagggtctatgtccatggc
cctatcaaccagggtatttttccactttcatacattcgaagacatctttggatacagcca
attcctgctgttgccatttacctaaagcctgtccttatctctgcatcttacagcatctca
gtcctggattatccttgctgtaccatccaggatttgccggagcttactactgaaagtctg
gaagctggagacaacagccagttctgctggaggaacctcttttcctgcatcaacctcctg
aggctgctcaataaactgaccaaatggaaacattcccggaccatgatgctggtagtgttt
aaatcggcaccaatcttaaagcgggccctcaaggtcaaacaggccatgctgcaactttat
gtcctaaagctactaaagttacagaccaagtacctggggcgccaatggaggaaaagcaac
atgaaaaccatgtcagccatttaccagaaagtgcgtcaccgcatgaacgatgactgggct
tacgggaatgacatcgatgccagaccatgggacttccaagcagaagaatgtaccttgagg
gccaacattgaggcttttaacagccgtcgctatgacagaccccaggactctgagttttca
cctgtggataactgcttgcagagcgtactggggcagaggttggatctgcctgaagatttc
cactattcatatgagctctggctcgagagagagccagctaaagggaaaaaaggaaaaggc
cagggcaagtctcatgggaagaaacagaagaaaccagaagtggacattctcagccccgcg
gccatgctgaacctctactacatcgcccacaacgtcgctgactgcctgcatctgcgaggc
ttccattggccgggtgctcccaaaggaaagaaagggagaagcaagtga

>gi568815591f:129334473_129583066|GENSCAN_predicted_peptide_3|143_aa
MRPRDIWSCSPEAAVYAELKSHGALEITLQPSEQCAAKVGPWKLAHRPNPDPGSCLYGCR
QIFAFYPEPSIHGLYCSLCLPSAELPDDFPNGQSPGLHKTEFLIPEELKKCQQLLNYVKE
GHTQVASHVQRLFMECAGFSPEV

>gi568815591f:129334473_129583066|GENSCAN_predicted_CDS_3|432_bp
atgaggccaagagacatatggtcctgttctcctgaggctgcagtctacgcggagctgaag
agtcatggagccttggagattaccctccagccctcagagcagtgtgcagccaaagttggt
ccctggaagctcgcacacaggcccaacccagaccccgggtcctgcctctatggctgcagg
cagatctttgcattttacccagagccctccattcatgggctctactgcagtctctgtctc
cccagtgccgagctccctgatgattttccaaatggacagtctcctgggctccacaagact
gagttcctgattccagaagagctgaaaaaatgccagcaactcttgaattatgtgaaggag
gggcacacgcaggtggcttcccatgtgcagaggctgtttatggagtgtgcaggattcagc
ccagaagtgtga

>gi568815591f:129334473_129583066|GENSCAN_predicted_peptide_4|120_aa
MALIDVGFVGEKRADGSPLSGQLFTIPGRRAKLAVGNMGSKKEKNENRAKGEAPYKTIRS
LDWELYVDGSSFINPQGERCAGYAVVILDAVIEAKSLPQGTSAQKAELIALIWALELSEX

>gi568815591f:129334473_129583066|GENSCAN_predicted_CDS_4|360_bp
atggccctcattgacgtgggcttcgtgggtgagaaacgggctgatgggtcgcctctttca
gggcagttgttcactattccagggaggagggccaagctggcagtgggcaacatgggcagc
aagaaggagaagaatgagaaccgagcaaagggggaagccccttataaaaccatcagatct
ttagactgggagctgtacgtggacgggagcagcttcatcaacccacaaggagagaggtgt
gcgggatatgcggtggtaatcctggatgctgtcattgaagccaaatcattgccccagggc
acttcagcccagaaggccgaactcattgctttaatttgggccttagagctgagtgaagnn