Result of FASTA (ccds) for pF1KA0872
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0872, 547 aa
  1>>>pF1KA0872 547 - 547 aa - 547 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.4664+/-0.000821; mu= 5.7391+/- 0.050
 mean_var=177.8392+/-35.290, 0's: 0 Z-trim(114.5): 12  B-trim: 0 in 0/53
 Lambda= 0.096175
 statistics sampled from 15041 (15049) to 15041 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.462), width:  16
 Scan time:  4.190

The best scores are:                                      opt bits E(32554)
CCDS10925.1 MON1B gene_id:22879|Hs108|chr16        ( 547) 3632 515.9 4.9e-146
CCDS67082.1 MON1B gene_id:22879|Hs108|chr16        ( 401) 2564 367.6 1.6e-101
CCDS67083.1 MON1B gene_id:22879|Hs108|chr16        ( 438) 2562 367.4  2e-101
CCDS2808.2 MON1A gene_id:84315|Hs108|chr3          ( 652)  946 143.2 8.8e-34
CCDS46830.1 MON1A gene_id:84315|Hs108|chr3         ( 490)  473 77.5   4e-14


>>CCDS10925.1 MON1B gene_id:22879|Hs108|chr16             (547 aa)
 initn: 3632 init1: 3632 opt: 3632  Z-score: 2735.2  bits: 515.9 E(32554): 4.9e-146
Smith-Waterman score: 3632; 100.0% identity (100.0% similar) in 547 aa overlap (1-547:1-547)

               10        20        30        40        50        60
pF1KA0 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
              490       500       510       520       530       540

              
pF1KA0 NGLFTGL
       :::::::
CCDS10 NGLFTGL
              

>>CCDS67082.1 MON1B gene_id:22879|Hs108|chr16             (401 aa)
 initn: 2564 init1: 2564 opt: 2564  Z-score: 1936.3  bits: 367.6 E(32554): 1.6e-101
Smith-Waterman score: 2564; 99.2% identity (99.7% similar) in 392 aa overlap (156-547:10-401)

         130       140       150       160       170       180     
pF1KA0 YGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQ
                                     . .:::::::::::::::::::::::::::
CCDS67                      MVSGQLRFGVKTEDHKLVFLQQGPLLLVAMSRTSQSAAQ
                                    10        20        30         

         190       200       210       220       230       240     
pF1KA0 LRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 LRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLL
      40        50        60        70        80        90         

         250       260       270       280       290       300     
pF1KA0 GAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 GAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQ
     100       110       120       130       140       150         

         310       320       330       340       350       360     
pF1KA0 LLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAFHAMAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 LLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAFHAMAA
     160       170       180       190       200       210         

         370       380       390       400       410       420     
pF1KA0 CRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 CRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHR
     220       230       240       250       260       270         

         430       440       450       460       470       480     
pF1KA0 QLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 QLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSK
     280       290       300       310       320       330         

         490       500       510       520       530       540     
pF1KA0 FELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 FELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFT
     340       350       360       370       380       390         

         
pF1KA0 GL
       ::
CCDS67 GL
     400 

>>CCDS67083.1 MON1B gene_id:22879|Hs108|chr16             (438 aa)
 initn: 2886 init1: 2562 opt: 2562  Z-score: 1934.3  bits: 367.4 E(32554): 2e-101
Smith-Waterman score: 2672; 80.1% identity (80.1% similar) in 547 aa overlap (1-547:1-438)

               10        20        30        40        50        60
pF1KA0 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
       :::::::::::::::::::::::::::::::::::::::::::::::::           
CCDS67 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEET-----------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KA0 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
                                                                   
CCDS67 ------------------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KA0 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
                                             ::::::::::::::::::::::
CCDS67 --------------------------------------EDHKLVFLQQGPLLLVAMSRTS
                                            50        60        70 

              190       200       210       220       230       240
pF1KA0 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
              80        90       100       110       120       130 

              250       260       270       280       290       300
pF1KA0 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
             140       150       160       170       180       190 

              310       320       330       340       350       360
pF1KA0 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
             200       210       220       230       240       250 

              370       380       390       400       410       420
pF1KA0 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
             260       270       280       290       300       310 

              430       440       450       460       470       480
pF1KA0 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
             320       330       340       350       360       370 

              490       500       510       520       530       540
pF1KA0 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
             380       390       400       410       420       430 

              
pF1KA0 NGLFTGL
       :::::::
CCDS67 NGLFTGL
              

>>CCDS2808.2 MON1A gene_id:84315|Hs108|chr3               (652 aa)
 initn: 1262 init1: 548 opt: 946  Z-score: 719.9  bits: 143.2 E(32554): 8.8e-34
Smith-Waterman score: 1390; 46.3% identity (70.6% similar) in 521 aa overlap (16-527:155-652)

                              10           20        30        40  
pF1KA0                MEVGGDTAAPAPGGAEDL---EDTQFPSEEAREGGGVHAVPPDPE
                                     :::   ::    ..  .::  ... :: : 
CCDS28 RAESPTPGMAQGMEPGAGQEGAMFVHARSYEDLTESEDGAASGDSHKEG--TRGPPPLPT
          130       140       150       160       170         180  

              50        60        70         80        90       100
pF1KA0 D-EGLEETGSKDKDQPPSPSPPPQSEALSSTSRLW-SPAAPENSPTCSPESSSGGQGGDP
       : . . .  :. . :  . .   : : : ..:. :  : .  . :.  :    :   :: 
CCDS28 DMRQISQDFSELSTQLTGVARDLQEEMLPGSSEDWLEPPGAVGRPATEPPRE-GTTEGDE
            190       200       210       220       230        240 

                110       120       130       140       150        
pF1KA0 SD--EEWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYA
        :  : :: ..::::::::::::.:::::: ::::.:::::.:::::...  .:::.:.:
CCDS28 EDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHA
             250       260       270       280       290       300 

      160       170       180       190       200       210        
pF1KA0 EDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDL
       . .:.::....::.:::..:: ::: .:  ::: .. ::.: :: :....:: .::::::
CCDS28 DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDL
             310       320       330       340       350       360 

      220       230       240       250       260       270        
pF1KA0 RRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVL
       ::::.::::  : ::. : .:: ..:.::.::.:::  .::...: :..  : .:..:.:
CCDS28 RRLLSGSERITDNLLQLMARDP-SFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSIL
             370       380        390       400       410       420

      280       290       300       310        320       330       
pF1KA0 AVGGRLITAAQERNVLAECRLDPADLQLLLDWVGAPA-FAAGEAWAPVCLPRFNPDGFFY
        . ..:.. ..... .    : : ::.::.. ... . :  ::::.:::::.::  :::.
CCDS28 LARNQLVALVRRKDQF----LHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH
              430           440       450       460       470      

       340        350       360       370       380       390      
pF1KA0 AYVARLDA-MPVCLLLLGTQREAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSAS
       :... :.    .::::..:.:: : :.. :::  .. ..  ::  :: ::          
CCDS28 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALR--------
        480       490       500       510       520                

        400       410       420       430       440       450      
pF1KA0 APAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLH
       .: :::  :: : :::::::        ..   :::::.::::. :::..::  ::. ::
CCDS28 TPYYSVAQVGIPDLRHFLYK-------SKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLH
      530       540              550       560       570       580 

        460       470       480       490       500       510      
pF1KA0 ARLHSTSRPLRLIYHVAEKETLLAWVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEE
       .: :..::::. ::... .:.::::::. :::: : ::: :::.:. .. ::.::..:::
CCDS28 SRAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEE
             590       600       610       620       630       640 

        520       530       540       
pF1KA0 DRLFIRYPPKYSTPPATSTDQAAHNGLFTGL
       :::::  :  :                    
CCDS28 DRLFILTPLTY                    
             650                      

>>CCDS46830.1 MON1A gene_id:84315|Hs108|chr3              (490 aa)
 initn: 964 init1: 400 opt: 473  Z-score: 367.1  bits: 77.5 E(32554): 4e-14
Smith-Waterman score: 1073; 47.4% identity (73.6% similar) in 371 aa overlap (159-527:140-490)

      130       140       150       160       170       180        
pF1KA0 VEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRG
                                     . .:.::....::.:::..:: ::: .:  
CCDS46 CLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVARTRQSAQELAQ
     110       120       130       140       150       160         

      190       200       210       220       230       240        
pF1KA0 ELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLLGAV
       ::: .. ::.: :: :....:: .::::::::::.::::  : ::. : .:: ..:.::.
CCDS46 ELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQLMARDP-SFLMGAA
     170       180       190       200       210       220         

      250       260       270       280       290       300        
pF1KA0 RCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQLLL
       ::.:::  .::...: :..  : .:..:.: . ..:.. ..... .    : : ::.::.
CCDS46 RCLPLAAAVRDTVSASLQQARARSLVFSILLARNQLVALVRRKDQF----LHPIDLHLLF
      230       240       250       260       270           280    

      310        320       330       340        350       360      
pF1KA0 DWVGAPA-FAAGEAWAPVCLPRFNPDGFFYAYVARLDA-MPVCLLLLGTQREAFHAMAAC
       . ... . :  ::::.:::::.::  :::.:... :.    .::::..:.:: : :.. :
CCDS46 NLISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDC
          290       300       310       320       330       340    

        370       380       390       400       410       420      
pF1KA0 RRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHRQ
       ::  .. ..  ::  :: ::          .: :::  :: : :::::::        ..
CCDS46 RRRFQERLRKRGAHLALREALR--------TPYYSVAQVGIPDLRHFLYKS-------KS
          350       360               370       380                

        430       440       450       460       470       480      
pF1KA0 LPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSKF
          :::::.::::. :::..::  ::. ::.: :..::::. ::... .:.::::::. :
CCDS46 SGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYYTGPNENLLAWVTGAF
     390       400       410       420       430       440         

        490       500       510       520       530       540      
pF1KA0 ELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFTG
       ::: : ::: :::.:. .. ::.::..::::::::  :  :                   
CCDS46 ELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY                   
     450       460       470       480       490                   

        
pF1KA0 L




547 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 01:05:42 2016 done: Fri Nov  4 01:05:42 2016
 Total Scan time:  4.190 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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