GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:06:11

Sequence gi568815582f:77091486_77298305 : 206820 bp : 41.08% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2147   2271  125  2  2   88  116    92 0.495  11.31
 1.02 Term +  21197  21402  206  0  2   42   42   164 0.246   3.75
 1.03 PlyA +  21815  21820    6                               1.05

 2.07 PlyA -  22208  22203    6                               1.05
 2.06 Term -  41743  41678   66  1  0   71   39   106 0.261   0.96
 2.05 Intr -  50720  50641   80  0  2   71   55   106 0.018   3.95
 2.04 Intr -  56820  56769   52  0  1   94   91    57 0.083   4.16
 2.03 Intr -  58772  58629  144  2  0   49   32   124 0.262   2.46
 2.02 Intr -  61461  61361  101  1  2   54  108    53 0.784   2.81
 2.01 Init -  63560  63509   52  2  1  103  108    22 0.795   7.12
 2.00 Prom -  64486  64447   40                              -6.35

 3.00 Prom +  64842  64881   40                              -3.35
 3.01 Init +  83928  83967   40  2  1   62   81    57 0.244   2.80
 3.02 Intr +  96190  96325  136  2  1   79   53    66 0.165   0.91
 3.03 Intr +  99991 100148  158  1  2   97   80   210 0.418  19.83
 3.04 Intr + 101966 102292  327  0  0   56   93   370 0.742  29.05
 3.05 Intr + 102850 103669  820  2  1  110   96   847 0.999  77.25
 3.06 Intr + 104050 104197  148  1  1   61  106   202 0.999  18.62
 3.07 Intr + 104430 104621  192  2  0   96   20    83 0.543   1.07
 3.08 Term + 106623 106823  201  2  0  103   44   217 0.999  15.21
 3.09 PlyA + 108133 108138    6                               1.05

 4.00 Prom + 114455 114494   40                              -2.85
 4.01 Init + 116566 116650   85  0  1   57  -60   124 0.150  -4.47
 4.02 Intr + 116725 116784   60  2  0  129   92    52 0.828   7.49
 4.03 Intr + 116884 117054  171  2  0   41   95    78 0.713   2.79
 4.04 Intr + 117512 117659  148  0  1   32   63    70 0.203  -2.73
 4.05 Intr + 117932 117986   55  2  1   86   94    63 0.289   4.76
 4.06 Intr + 119728 119791   64  0  1   77   68    68 0.615   1.07
 4.07 Intr + 120072 120418  347  1  2   85  -17   211 0.419   4.49
 4.08 Intr + 120645 120732   88  2  1   88   80   130 0.910  10.82
 4.09 Intr + 120797 120884   88  0  1   89   80   103 0.999   7.71
 4.10 Intr + 121089 121161   73  0  1  125   75    94 0.992  10.29
 4.11 Term + 121990 122190  201  0  0   61   49   179 0.965   7.71
 4.12 PlyA + 122690 122695    6                               1.05

 5.00 Prom + 125776 125815   40                              -6.95
 5.01 Init + 127957 127978   22  0  1   82   95    21 0.023   2.13
 5.02 Intr + 128913 129074  162  1  0   78   20    97 0.009   0.93
 5.03 Intr + 131107 131151   45  2  0   88   92    60 0.179   3.86
 5.04 Intr + 133365 133497  133  1  1   34   97   110 0.132   5.28
 5.05 Intr + 134481 134584  104  0  2  -18   70    94 0.101  -4.10
 5.06 Intr + 136250 136365  116  0  2    0   98   146 0.785   6.05
 5.07 Term + 136620 136799  180  2  0   98   44   132 0.980   6.43
 5.08 PlyA + 137339 137344    6                               1.05

 6.06 PlyA - 137383 137378    6                               1.05
 6.05 Term - 140108 140040   69  2  0   64   39    74 0.600  -2.94
 6.04 Intr - 140236 140150   87  1  0   37   94    82 0.059   2.95
 6.03 Intr - 144913 144685  229  0  1   57   85   117 0.060   5.25
 6.02 Intr - 146335 146251   85  2  1   72   40    73 0.041  -1.14
 6.01 Init - 153622 153484  139  1  1   57  105    96 0.920   8.55
 6.00 Prom - 163334 163295   40                              -4.45

 7.02 PlyA - 164091 164086    6                               1.05
 7.01 Sngl - 165272 164643  630  2  0   43   42   187 0.513   5.53
 7.00 Prom - 167283 167244   40                              -5.35

 8.06 PlyA - 167500 167495    6                               1.05
 8.05 Term - 174294 174065  230  1  2   42   52   108 0.012  -1.59
 8.04 Intr - 197926 197779  148  1  1  122   83    82 0.909   9.99
 8.03 Intr - 199993 199781  213  1  0   85   94    78 0.952   6.09
 8.02 Intr - 201773 201591  183  2  0   38   64   173 0.916   8.96
 8.01 Init - 203638 203438  201  1  0   28   92   105 0.517   3.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  48464  48513   50  1  2   72   75    60 0.855   3.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_1|110_aa
XYKKVESGACVSRKMTRAFILTSIAIGPQIPHGSCAQINAAEEYSGNAAVRFPIQRIKKL
AAILSLGLILANQPQCYRNICGKSMQKGNKVQALIPMNSKPTARIILPVM

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_1|333_bp
nnctacaagaaggtagaaagtggggcatgtgtcagcaggaaaatgactcgggcttttata
ttgacaagcattgccattgggccgcaaattccccatggcagctgtgctcagatcaatgct
gctgaagaatatagcgggaatgccgctgtccggtttccaatccaaagaattaagaaactg
gcagctatcctatctcttgggctcattcttgcaaaccaaccacaatgctacagaaacata
tgtgggaagtccatgcaaaaaggaaacaaggtccaggcactcatccccatgaattctaag
ccaacagcgaggatcatattgccagtcatgtga

>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_2|164_aa
MGSGPSIPQHTVVSAVPSPTLEAGDSEGPNYNMRGVLHSLNRRTDIKTIFQGSSIFSKFI
VFVKATQAASGAAISIWSPCSLAMPRSLLWDFGALFPLEAPWLLRAEPAEKNEHSTAATA
AANLYPNRAARKNPDLLDGVVKASTKCEDDEDKDLYDDPFPLND

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_2|495_bp
atgggctcgggcccctctatcccccaacacacagtcgtatcagcagtcccaagtcctacg
ctagaagctggggattcagaggggccaaactataatatgcgaggagtgctacactctctg
aacagaagaacagatattaaaacaatattccaaggaagtagcattttcagcaaattcatc
gtctttgtcaaggccactcaggcagcgagtggtgcagccatcagcatctggagcccatgc
tctctggccatgcccagaagcctcctatgggactttggtgcccttttccccctggaggcc
ccatggctgcttcgtgctgagccagcagaaaaaaatgagcacagcacagctgctactgca
gcagccaatctgtatcctaacagagcagcaagaaagaacccagatctccttgatggtgtt
gtcaaggcatctactaaatgtgaagatgatgaggataaagacctttatgatgatccattt
ccgcttaatgactag

>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_3|673_aa
MQSDLMDFGDSEEVNDSSFEQVWDQALVKNEHLTMGCQVIAQPEISIMGWVLDTHLAIRD
VQMEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPP
SPSPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEA
GKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSR
TSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQ
DPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECR
LDPADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQRE
AFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPL
DIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETL
LAWISNQDSVFDFPEAPLTTTAVPADSPVAQSMCLEAPHSSPAHCDSMSPQHSSDYRRGP
LLCPPPGVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATS
TDQAAHNGLFTGL

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_3|2022_bp
atgcagagtgatttaatggactttggagactcggaagaagttaatgattcttcttttgaa
caggtttgggaccaggccttggtaaagaatgagcacctaactatgggatgtcaggtgatt
gcacagcctgagatttcgatcatgggctgggtgttggatactcacctagctataagggat
gtgcagatggaggtcggaggagacactgctgccccggcccccgggggcgcggaggacttg
gaggacacgcagttccccagtgaggaagctagagaaggtggaggggttcacgcggtcccg
ccggatcccgaagacgagggcctggaggaaacaggatccaaggacaaggaccagccaccc
agcccatcaccaccgccccagtcagaggccctgtcaagcacctctcggctctggagtcct
gcagcccctgagaatagtcccacatgtagccctgagagtagctctggaggccagggcggg
gaccccagtgatgaggagtggcgcagccagcggaagcatgtgtttgtgctgagtgaggct
ggcaagcccatctactcgcggtatggtagtgtggaggcgctgtcggctaccatgggtgta
atgaccgccctggtgtcctttgtgcagagtgcgggagatgccatccgtgccatctacgct
gaggaccacaagctggtgttcctacaacagggcccactgttgctcgtggccatgtcacgg
acttctcagtcagcagcccagctgcggggggagctgctagctgtgcacgcacagatcgtg
agcacacttacacgtgcaagtgtcgcccgcatcttcgcacacaagcagaactatgacctc
cgccgcctgctggctggttcagagcgcacactggaccgacttctggacagtatggagcag
gacccaggagccctgctcctgggtgccgtgcgctgtgtgccccttgcccgcccgctgcga
gacgcactaggtgcgctcctccgacgttgcacagcgcctggcctggcgctgtcagtgctg
gcagtaggcggtcgacttataacagcagcccaggagcgaaatgtgctggccgagtgccgg
ctggacccagctgacctgcagttgctgctcgactgggtgggtgcaccagcctttgcggcg
ggtgaggcttgggcacctgtgtgcctgccccgcttcaaccctgatggttttttctacgcc
tacgtggcccgcctggatgctatgcctgtctgcctgctgctgcttggcacccaacgtgaa
gccttccatgccatggccgcctgccggcgcctggttgaagatgggatgcatgcccttggt
gccatgcgtgcccttggggaggctgccagcttctctaatgcctcatcagccagtgctcct
gcctacagcgtgcaggctgtcggggcgccgggcctccggcacttcctgtataagccgctg
gacatccctgaccaccaccgccaactgccccagtttaccagccctgagctagaggccccc
tacagcagagaggaggagcggcagcggctgtcggacctgtaccaccgcctgcatgctcgt
ctccacagcacctcccgacccctgcgcctcatttaccacgtggctgagaaggagacacta
ctggcctggattagcaaccaggacagtgtctttgactttccagaggccccattaactacc
actgctgtgcctgccgattccccagtagcccaatccatgtgtttggaggcaccccattca
tcaccagctcattgtgactccatgagtccccagcactcctcagactacaggcgtggtccc
ttgctgtgccctccacctggggtgacctccaaattcgagctctatacctgcctcagccct
ctggtgaccaaggcaggtgcaatcttggtagtgaccaaactcctgcgctgggtgaagaaa
gaggaggaccggctcttcattcgttacccacccaagtactccacaccaccagccacctct
acggaccaagctgcccataatggcttgttcactggactctga

>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_4|459_aa
MQALQGALAELNTQQALNICRLIDSSRHKGSLEPQIEDLISRINDLQQGLFEDDCAMSYL
RENSKARDYTHTVSFSLLGPAKKKSSEELRETHSLWEALHRELDSWLYYTFCVAFPLYEV
ALGMAMGCLEAESVIVFSSEWRESAPRGGLGQKARGTEDPPDALPREGKRGSEVGCQRTA
GGSDGPAQGPLGIPLANGSPGKAMVRSFLHLANVSGCTGQHLRQGGRVADQRVHVFAVPS
WLGTVEAPRKLVARSWNFSGKASKQVTSQRRGEGSEGRSRAGIGAEGRPWGWTVPETVEE
PQIGEWRMRRMLEQRLAREIRALERSKEQLLSESEPPAPGRLVRAKLREVERRLHSPPEV
EGAMAVNDGLKAELEIFGEQVRSAPEVGAGEGEATSDLLNVSATLEAGIWDPNPKAPSSR
LRPLTEHVLTKQAFADCLLGTRHCSKHWILNSAVSDGLT

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_4|1380_bp
atgcaagcccttcaaggggctctggcagagctcaacacacagcaggcgctcaatatatgc
cggttaattgatagcagcagacacaagggaagcctggagccacagatagaggacctgatt
agccggattaatgatcttcagcaagggttgtttgaagatgactgtgcaatgtcatatttg
cgagagaacagcaaggctagagactacactcatacagtgtctttttcccttcttggccca
gcaaagaagaaatccagtgaggaactgagagagacccacagtctctgggaggccctgcat
agggaattagactcctggctgtactacaccttctgtgtggctttccccttatatgaagtt
gcactggggatggcaatggggtgcctggaggcagaaagtgtcattgtgttttccagtgaa
tggagagaaagtgcacctagaggaggtcttgggcaaaaagcaagaggcactgaggatcct
ccagatgcactgccaagagaaggaaagcgaggctcagaggttggatgtcagaggacagct
ggaggatctgatgggccagcacaaggacctctgggaattccactggcaaatggcagccca
gggaaagccatggtcaggtcattccttcatttagctaatgtcagtggttgcaccggtcag
catttgaggcagggagggagggtagcagatcaaagagtccacgtctttgctgtcccaagc
tggttggggacggtggaggcaccaagaaagttagtggctagatcgtggaacttcagtggg
aaggcctctaagcaagtgacatctcaacgcagaggtgaaggaagtgagggaagaagccgt
gcaggtatcggtgcagaaggaaggccctggggctggacggtgcctgaaaccgttgaggag
ccgcagattggggaatggaggatgaggagaatgctggagcagcgactggcccgggagatc
cgtgccctggagagaagcaaggagcagctgctctcggagagtgagcctcccgcgccaggg
aggctggtgcgcgccaagctgcgggaggtggagcggcggctgcactcgccgcctgaggtc
gagggcgccatggcggtgaatgacgggctgaaggcggagctggagatattcggggagcag
gtccggagcgcccccgaggtcggggccggcgagggagaggcaacctcagatctgttaaat
gtgtccgccactctggaggccggcatttgggacccaaatccaaaggcacccagcagcagg
ctgcggccattgactgagcatgtactgactaagcaggcatttgccgattgcctgctgggt
accaggcactgttctaagcactggattttaaacagcgcggtcagcgacggcctcacctag

>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_5|253_aa
MQAHPNADTIQYKKCPDDQYQNSQRIYCLPKDVNFLAFEGPLGMSLACTALPLCPYCSGP
WDGPSIDEVMLRNTGVVKTSSPHVAVCNIAHLFLIPLNPNPTYPTAADCDKTQWPTPESC
SFGTPVYLLSPTDSQTALHATINSGATKCPESLSEVESAATLDGASSITRGNPTGKAAGN
ERARASMDDGWDVKLCIVVASSWVVTQIEATKVYFMNGYFLRSLAKVTSSQCGRESLKSL
LPNPMPSQAPLDT

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_5|762_bp
atgcaggcacatcctaatgcagatactattcagtataagaagtgtccagatgatcaatat
cagaatagtcagagaatttactgtcttccaaaggatgtgaacttcttggcttttgaaggc
cctttggggatgtctctggcctgcacagccctgcctctctgtccttactgcagtggtcct
tgggatgggccctcaatagatgaggtgatgctccgcaacaccggtgtggttaaaacttcc
tctccccatgtggctgtttgcaatatagcccacttgttcctcatcccactgaacccaaac
ccaacatatcccacagctgctgactgtgataaaacccagtggccaacaccagagtcgtgt
agctttggaacccctgtgtatctgctgtcacccactgattctcaaactgcactacatgct
acaatcaatagcggtgctacaaagtgcccggaatccctttcagaagtagaatcagcagcc
acgttggatggggcaagctccataaccagaggcaatccaacagggaaagcagcaggtaac
gagcgtgccagagccagtatggatgatggttgggatgttaagctctgcattgttgttgct
tcctcatgggttgtaacccagatagaagccacaaaagtatatttcatgaatgggtacttt
ttacggtctctggctaaagtcaccagcagccagtgtgggagagagagcttgaagtccctg
ctaccaaacccaatgccaagtcaagcccccctggatacctga

>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_6|202_aa
MSRKTTWDENTWFECGRRSVSSSIKIIGCHQKQEHPLPILKDTGEQAHVDLPDSFVLLII
KALQPAVICVKKTPGAVTPTWTVTGRSWLVGAHVGRGAETGGSAKKASEPARLSAQPRSR
SALWCALNILHGVTRRLGPLGASLSRRCHLLTYNDTMGKDHTRMTDAYAITLSRGPATKH
MPASELSKITFDDMTVGNDSTM

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_6|609_bp
atgtcaagaaaaaccacctgggatgaaaacacttggtttgaatgtggaagaaggagtgta
agttcatcaatcaaaataataggttgtcaccagaaacaggagcaccctttgccaatcctc
aaggacactggagaacaagctcatgttgatttaccagatagctttgttttgctgattata
aaggccttgcagccagcagtcatctgtgtgaaaaagactcctggagcagtcacacctacg
tggacagtaacagggcgctcttggttagtaggtgcacatgtgggtcggggagcagagaca
ggaggctccgcaaagaaagcctcggagccagcccggctcagtgcccagccgcgaagccgt
agcgccctctggtgtgccctgaacatattgcatggcgtcacaaggcggttgggaccgctt
ggagcatctctgagccgacgctgccatctcctgacctataatgacacaatgggaaaagac
catacccgaatgactgatgcttatgcaataacattaagcagagggcctgccactaagcac
atgcctgcaagtgaattgagcaaaattacatttgacgacatgactgttgggaatgatagc
accatgtag

>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_7|209_aa
MNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVINHINRTNNKNHM
IISIDAEKAFDKIQQPFMLKTLNKLGIVGTYLKIIRAIYDKPTANIILNGQKLEAFPLKT
GTRQGCPLSPLLFNIVLEVLGRAIRQEKEIKDIQLGKEEVKLSLFADDMIVYIENPIISA
QNLLKVISNFGSLRIQNQCVKITSIPIHQ

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_7|630_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaaacttatccaccatgatcaagttggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaatgtaatcaatcacataaacagaaccaacaacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacagcctttcatgctaaaa
actctcaataagctaggtattgttggaacctatctcaaaataataagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaacc
ggcacaagacagggatgtcctctctcaccactcctattcaacatagtgttggaagttctg
ggcagggcaatcaggcaagagaaagaaataaaggatattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatatagaaaaccccatcatctcagcc
caaaatctccttaaggtgataagcaacttcggcagtctgaggatacaaaatcaatgtgta
aaaatcacaagcattcctatacaccaataa

>gi568815582f:77091486_77298305|GENSCAN_predicted_peptide_8|324_aa
MPGEWSTCSKACAGGQQSRKIQCVQKKPFQKEEAVLHSLCPVSTPTQVQACNSHACPPQW
SLGPWSQCSKTCGRGVRKRELLCKGSAAETLPESQCTSLPRPELQEGCVLGRCPKNSRLQ
WVASSWSECSATCGLGVRKREMKCSEKGFQGKLITFPERRCRNIKKPNLDLEETCNRRAC
PAHPVYNMVAGWYSLPWQQCTVTCGGGVQTRSVHCVQQGRPSSSCLLHQKPPVLRACNTN
FCPAPEKRVLEILAMRQEKEIRGIKIGIEKVKLSLFADDMILYVENLIVSAQKLKLISNF
IKSKDTKSVSKNHKHSYIPTTDKQ

>gi568815582f:77091486_77298305|GENSCAN_predicted_CDS_8|975_bp
atgccaggtgaatggagtacatgcagcaaggcctgtgctggaggccagcagagccgaaag
atccagtgtgtgcaaaagaagcccttccaaaaggaggaagcagtgttgcattctctctgt
ccagtgagcacacccactcaggtccaagcctgcaacagccatgcctgccctccacaatgg
agccttggaccctggtctcagtgttccaagacctgtggacgaggggtgaggaagcgtgaa
ctcctctgcaagggctctgccgcagaaaccctccccgagagccagtgtaccagtctcccc
agacctgagctgcaggagggctgtgtgcttggacgatgccccaagaacagccggctacag
tgggtcgcttcttcgtggagcgagtgttctgcaacctgtggtttgggtgtgaggaagagg
gagatgaagtgcagcgagaagggcttccagggaaagctgataactttcccagagcgaaga
tgccgtaatattaagaaaccaaatctggacttggaagagacctgcaaccgacgggcttgc
ccagcccatccagtgtacaacatggtagctggatggtattcattgccgtggcagcagtgc
acagtcacctgtgggggaggggtccagacccggtcagtccactgtgttcagcaaggccgg
ccttcctcaagttgtctgctccatcagaaacctccggtgctacgagcctgtaatacaaac
ttctgtccagctcctgaaaagagagtattagaaattctggccatgagacaagagaaagaa
ataaggggtattaaaataggaatagagaaagtcaaattgtctttgtttgcagatgacatg
atcctttatgtagaaaaccttatcgtctcagcccaaaagcttaagctgataagcaacttc
atcaaatctaaggatacaaaatcagtgtccaaaaatcacaagcattcctatataccaaca
acagacaagcagtga