GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:05:32

Sequence gi568815591f_146016877 : 200197 bp : 43.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl + 2314403 2314924  522  1  0   57   39   211 0.281   9.15
 1.02 PlyA + 2316094 2316099    6                               1.05

 2.07 PlyA - 2318915 2318910    6                               1.05
 2.06 Term - 2320796 2320787   10  1  1  108   44    -3 0.054  -5.03
 2.05 Intr - 2322708 2322576  133  1  1   82   94    58 0.099   5.50
 2.04 Intr - 2333899 2333758  142  1  1   59   81    45 0.243   0.83
 2.03 Intr - 2334128 2334092   37  1  1  118  100    24 0.521   4.86
 2.02 Intr - 2335604 2335577   28  0  1   76  100    18 0.445  -1.03
 2.01 Init - 2336292 2336142  151  0  1   74   92    63 0.716   3.63
 2.00 Prom - 2340131 2340092   40                              -3.26

 3.00 Prom + 2345518 2345557   40                              -5.76
 3.01 Init + 2347200 2347377  178  2  1   97   40   163 0.090  10.12
 3.02 Intr + 2366773 2367012  240  2  0  103  103   211 0.787  21.62
 3.03 Term + 2369714 2369721    8  0  2   86   49     0 0.160  -6.07
 3.04 PlyA + 2370972 2370977    6                               1.05

 4.04 PlyA - 2371265 2371260    6                               1.05
 4.03 Term - 2371580 2371544   37  1  1  109   37    33 0.339  -2.89
 4.02 Intr - 2372943 2372807  137  0  2   86   99   103 0.847  10.57
 4.01 Init - 2376120 2376115    6  0  0   84   94     0 0.835   1.07
 4.00 Prom - 2376976 2376937   40                              -3.46

 5.00 Prom + 2379784 2379823   40                              -2.46
 5.01 Init + 2382297 2382373   77  2  2   38   55   119 0.037   4.16
 5.02 Intr + 2392108 2392193   86  1  2   36   64    82 0.057   0.06
 5.03 Intr + 2392515 2392595   81  1  0  129   92    38 0.995   7.91
 5.04 Term + 2398541 2398740  200  0  2  122   55   353 0.999  32.96
 5.05 PlyA + 2399801 2399806    6                               1.05

 6.00 Prom + 2403684 2403723   40                              -5.16
 6.01 Sngl + 2408871 2409440  570  2  0   83   55   291 0.955  21.46
 6.02 PlyA + 2410335 2410340    6                               1.05

 7.00 Prom + 2413745 2413784   40                              -2.26
 7.01 Init + 2413991 2414119  129  1  0   74   99    70 0.484   6.85
 7.02 Intr + 2427504 2427640  137  2  2   52    6   133 0.394   0.87
 7.03 Term + 2428906 2429305  400  1  1   -3   47   575 0.627  38.89
 7.04 PlyA + 2429798 2429803    6                               1.05

 8.00 Prom + 2431946 2431985   40                              -3.66
 8.01 Init + 2452284 2452406  123  2  0  110   69    27 0.356   3.17
 8.02 Term + 2465211 2465435  225  2  0   99   34   149 0.137   7.38
 8.03 PlyA + 2465775 2465780    6                               1.05

 9.00 Prom + 2470950 2470989   40                              -4.66
 9.01 Init + 2474425 2474450   26  0  2  111   74    26 0.231   2.54
 9.02 Intr + 2484152 2484285  134  2  2   70   76    44 0.319   1.69
 9.03 Intr + 2498235 2498362  128  1  2   81   88    85 0.315   8.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 2384412 2384176  237  0  0   60   47   200 0.924   8.19
S.002 Init + 2392341 2392449  109  2  1   77   37    88 0.831   2.98
S.003 Init - 2420550 2420485   66  0  0  104   32    77 0.839   4.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f_146016877|GENSCAN_predicted_peptide_1|173_aa
MEWMDGVDGWSGRMEWTDGMDGWNGWMEWRDGVDGVDGWSGWMEWMDGMDGVDVWNGWMD
GWIDGVDGWNGQMELMDGWMDGMDGRMEWMDGMDGWSGWMEWMDGMDGWNGRMESMDGVD
GWNGRMEWMDGVDGWNGRMEWMDGVDGWIGWMEWMDGTDGWIGWMEWTDGVDG

>gi568815591f_146016877|GENSCAN_predicted_CDS_1|522_bp
atggagtggatggatggagtggatggatggagtggacgcatggaatggacggatggaatg
gacggatggaatggatggatggagtggagggatggagtggatggagtggacggatggagt
ggatggatggaatggatggatgggatggatggagtggacgtatggaatggatggatggat
ggatggatagatggagtggacggatggaatggacagatggagttgatggatggatggatg
gatggaatggatggacggatggagtggatggatggaatggacggatggagtggatggatg
gaatggatggatggaatggatggatggaatggacggatggagtcgatggatggagtggat
ggatggaatggacggatggagtggatggatggagtggatggatggaatggacggatggag
tggatggatggagtggacggatggattggatggatggagtggatggatggaacggacgga
tggattggatggatggaatggacagatggagtggatggatag

>gi568815591f_146016877|GENSCAN_predicted_peptide_2|166_aa
MVPKQLPGPRLLTLEQAAGAPGPRAVSRILSNTGIHSAYYCLETSKHFSKRYNSLNLLIH
TWNSAWCALEGPRDLKEQLVYQGRFNETTKYMTATRTLTRNKLDLLPGIPLITNDITTKG
GFPTGRVRLQNPRGPSFVGRQPESRRAALSPPLSGSNPAPLKGSGE

>gi568815591f_146016877|GENSCAN_predicted_CDS_2|501_bp
atggtccccaaacaattgccggggccccgcctgttgaccttggagcaggctgccggggct
ccaggacccagggctgtctctaggatcttgagcaacactggcattcacagtgcatactac
tgtcttgaaacttcaaaacatttcagcaaacgatacaattccttaaacctgctcatccac
acctggaacagtgcctggtgtgcactggagggcccaagggatttgaaagaacagcttgtc
taccaaggccgatttaatgaaaccacgaaatatatgactgcaacaagaacgcttacaaga
aataaactcgatctgttgcctggtatccctctaataactaatgatataactacgaaaggt
ggctttcccactggccgggtcagacttcagaacccccgaggaccgtcctttgtcggccgg
cagcccgagtcccggcgggcagctttgagtccaccgctctcgggatcaaaccccgcacca
ctgaaaggcagtggtgagtag

>gi568815591f_146016877|GENSCAN_predicted_peptide_3|141_aa
MPEPPTHSMGSCAARASPTSATPCSTAPSPIDHPRAEECERTVQDWRAAPPAAPVRDPLE
TGKIDQEIHKYNTPGFTGCLSRVQFNQIAPLKAALRQTNASAHVHIQGELVESNCGASPL
TLSPMSSATDPWHLDHLDSGE

>gi568815591f_146016877|GENSCAN_predicted_CDS_3|426_bp
atgcctgagcctcccacccactccatgggctcctgtgcggcccgagcctccccgacgagc
gccaccccctgctccacagcgcccagtcccatcgaccacccaagggctgaggaatgtgag
cgcacggtgcaggactggcgggcagctccacctgcagccccagtgcgggatccactagaa
acagggaaaattgaccaagagattcacaaatacaacaccccaggattcactggttgcctc
tccagagtccagttcaaccagatcgcccctctcaaggccgccttgaggcagacaaacgcc
tcggctcacgtccacatccagggcgagctggtggagtccaactgcggggcctcgccgctg
accctctcccccatgtcgtccgccaccgacccctggcacctggatcacctggattcaggt
gaatag

>gi568815591f_146016877|GENSCAN_predicted_peptide_4|59_aa
MEEEKSDHQQQKAIAEKHHQEPASCSGVNAEPPPRGFRCSTCSEKLLWDMDEIGNHHSQ

>gi568815591f_146016877|GENSCAN_predicted_CDS_4|180_bp
atggaggaagagaagagtgatcatcagcagcaaaaggcaattgcagagaagcaccaccaa
gagccagcttcatgctcaggagtgaatgctgagccgcctcctcgtggtttccggtgctcc
acatgttcagagaaacttctctgggacatggatgaaattggaaatcatcattctcagtaa

>gi568815591f_146016877|GENSCAN_predicted_peptide_5|147_aa
MPVWLQAFHPDLAVSRIAPMQQQNQHCKKLIYKYIECHQLCMGLKVDGKQISTKSSADFP
YNPGQGQAIRNGVNRNSAIIGGVIAVVIFTILCTLVFLIRYMFRHKGTYHTNEAKGAESA
ESADAAIMNNDPNFTETIDESKKEWLI

>gi568815591f_146016877|GENSCAN_predicted_CDS_5|444_bp
atgcccgtatggcttcaggctttccaccctgatctggctgtatcccgcattgcacccatg
cagcagcagaaccagcactgtaaaaagctcatctacaaatacattgaatgccaccagttg
tgcatggggttaaaagtggatgggaagcagatttcaaccaaatccagtgcggattttcca
tataatccaggacaaggccaagctataagaaatggagtcaacagaaactcggctatcatt
ggaggcgtcattgctgtggtgattttcaccatcctgtgcaccctggtcttcctgatccgg
tacatgttccgccacaagggcacctaccataccaacgaagcaaagggggcggagtcggca
gagagcgcggacgccgccatcatgaacaacgaccccaacttcacagagaccattgatgaa
agcaaaaaggaatggctcatttga

>gi568815591f_146016877|GENSCAN_predicted_peptide_6|189_aa
MGRNQHKKAENSKNKNASSPKDHSSSPAKEKKWMENKFDELTEVGFRRWATTNSSELKEQ
VLTQCKEAKNLEQRLDELLTKITSLEKNINDLMQLKNTTQELREAYTSIKSRIDQAKERI
SEIEGQLNKIKREDKMREKRMKRNEQSLQEIWDYVKRPNLLRGDSVLAVLTALARSQHLL
CLGSHFGGT

>gi568815591f_146016877|GENSCAN_predicted_CDS_6|570_bp
atggggagaaaccagcataaaaaggctgaaaattcaaaaaacaagaacgcctcttctcca
aaggatcacagctcctcgccagcaaaggaaaaaaagtggatggagaataaatttgacgaa
ttgacagaagtaggcttcagaaggtgggcaacaacaaattcctccgagctaaaggagcaa
gttctaacccaatgcaaggaagctaagaaccttgaacaaaggttagacgaattgctaact
aaaataaccagtttagagaagaacataaatgacctgatgcagctgaaaaacacaacacaa
gagcttcgtgaagcatacacaagtatcaaaagccgaatcgatcaagcaaaagaaaggata
tcagagattgaaggtcaactcaataaaattaagcgagaagacaagatgagagaaaaaaga
atgaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaaccta
ctgagaggtgacagcgtgctggcagtcctcacagccctcgctcgctctcagcacctcctc
tgcctgggctcccactttggcggcacttga

>gi568815591f_146016877|GENSCAN_predicted_peptide_7|221_aa
MEYYAAIKKDEFVFFAGTWTKLETIILSKLTQEQKTKHHMFSLWVRGLAGLRSEAADLRD
VTALKAVRTQRVSSSKVYCKERKNKASTGSRPGLLCDFRHAPTGGGEEPEPAMVLQEALE
PAMCLDRYPHVQLEASELLLEDGGSALATELNTAKLALAYAGMEMNDLVVSCGLGLTPGS
VPTWLLDPMRLEEEHTAPGVTLALLPMLNQVARLLAAGRAA

>gi568815591f_146016877|GENSCAN_predicted_CDS_7|666_bp
atggaatactatgcagccataaaaaaggatgagttcgtgttctttgcagggacatggaca
aagctggaaaccatcattctcagcaaactaactcaggaacagaaaaccaaacaccacatg
ttctcactctgggttcgtggtctcgctggcctcaggagtgaagctgcagaccttcgtgat
gttacagctcttaaggcggtgcgaacccaaagagtaagcagcagcaaggtttactgcaaa
gagcggaagaacaaagcctccacaggatctcggccaggcctgctctgtgacttccgccac
gctcccacgggtggcggcgaggagcctgagccggcgatggtgctacaggaggcgctggag
ccggccatgtgcctggatcgctacccgcatgtgcagcttgaggcctcggagctgctgctg
gaagatggcggctcagccctggccactgagctcaacaccgccaagcttgccctggcctat
gcaggcatggagatgaatgacttggtggtgagctgcggcctgggcctcacgccagggtcc
gtgcccacctggctgctggaccccatgcggctcgaggaggagcacaccgcccccggtgtc
accttggcactcctgcccatgctgaatcaggtggcccggctgctggctgcagggagggcg
gcctga

>gi568815591f_146016877|GENSCAN_predicted_peptide_8|115_aa
MPGTSPFNKDISYVRRGPTLMTSSSSITSVTTLFPNKVMLEGFLQSVTSPKPSGDERDPP
WPPQLQDTSKGSCHRASNGFANRSHFWSSRSLKGFEMTDVTHMIYDRYSHGECQR

>gi568815591f_146016877|GENSCAN_predicted_CDS_8|348_bp
atgcctggcacttccccctttaataaggacatcagttatgtcagacgaggtcccactctc
atgacttcatcttcatcaattacatctgtaacaactctatttccaaataaggtcatgttg
gagggcttcctccaatctgtaacaagccccaaaccatctggagacgagcgggatcctccc
tggcctccgcagcttcaggacacatccaaaggaagctgccatcgagcatcaaacggcttt
gccaacagatcacatttctggagctctcgcagtctgaagggattcgagatgacagatgta
acccacatgatctatgacagatacagccatggagaatgtcagcgttaa

>gi568815591f_146016877|GENSCAN_predicted_peptide_9|96_aa
MESTEPAVLRATGDDIQRDLVLVHNRIIPSWTCLVCYLEQPQGCNSTSIVKYTDHSKRVE
ELSLSPKVGCKERPLQYADETRKSLSGKRKRLRDRR

>gi568815591f_146016877|GENSCAN_predicted_CDS_9|288_bp
atggagtccacggagcctgctgtactgcgagccactggggacgacattcaaagagatctt
gttcttgttcacaacagaatcattccttcgtggacttgcctggtctgctacttggagcaa
cctcaaggctgcaactcaacaagcatcgttaaatacacagaccactcaaagagggtggaa
gagctgtcattaagccctaaagtgggctgtaaagagaggcccctgcagtatgcagatgaa
acaaggaagagtctaagtgggaagaggaagagattaagagaccggcgg