GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:01:01

Sequence gi568815591f:10874835_11162085 : 287251 bp : 36.38% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  18630  18674   45  2  0  141   87    35 0.567   6.39
 1.02 Term +  21406  21780  375  0  0   48   41   125 0.618  -2.45
 1.03 PlyA +  21888  21893    6                               1.05

 2.03 PlyA -  26162  26157    6                               1.05
 2.02 Term -  32431  32195  237  1  0  109   44   104 0.856   3.28
 2.01 Init -  38094  37981  114  0  0   66   75   135 0.512  10.26
 2.00 Prom -  40571  40532   40                              -4.95

 3.00 Prom +  45839  45878   40                              -5.85
 3.01 Init +  46720  46782   63  0  0   51   26    79 0.543  -0.80
 3.02 Term +  52090  52533  444  0  0   70   48   302 0.995  18.65
 3.03 PlyA +  52819  52824    6                               1.05

 4.03 PlyA -  52871  52866    6                               1.05
 4.02 Term -  65655  65462  194  1  2   50   45   166 0.219   5.10
 4.01 Init -  77891  77846   46  2  1   86   98    32 0.406   4.90
 4.00 Prom -  85740  85701   40                              -3.65

 5.00 Prom +  85868  85907   40                              -2.95
 5.01 Init +  91490  91648  159  1  0   36   68   109 0.304   3.57
 5.02 Intr +  99383  99521  139  1  1   21   23   155 0.795   1.42
 5.03 Intr + 100001 100111  111  0  0   97   99   130 0.996  14.43
 5.04 Intr + 101438 101509   72  0  0  111   83     7 0.626   0.96
 5.05 Intr + 107538 108325  788  1  2   63   61  1086 0.256  93.66
 5.06 Intr + 115869 116013  145  2  1   38   90    99 0.225   4.03
 5.07 Intr + 119946 120174  229  1  1   39   22   201 0.445   4.61
 5.08 Term + 120866 121097  232  2  1   41   55   184 0.615   5.36
 5.09 PlyA + 121807 121812    6                               1.05

 6.02 PlyA - 122104 122099    6                               1.05
 6.01 Sngl - 131914 131654  261  1  0   27   31   348 0.948  17.91
 6.00 Prom - 134319 134280   40                              -4.75

 7.00 Prom + 135775 135814   40                              -7.05
 7.01 Init + 138515 138563   49  1  1   82   58    29 0.756  -1.54
 7.02 Intr + 138913 139072  160  2  1  112   33   100 0.890   5.02
 7.03 Intr + 148034 148145  112  2  1   66  100   115 0.988   9.96
 7.04 Intr + 153847 153984  138  0  0   54   92    73 0.448   4.04
 7.05 Intr + 160806 160952  147  2  0   88   80    48 0.913   3.51
 7.06 Intr + 161584 161854  271  0  1   67   57   257 0.997  16.69
 7.07 Intr + 162151 162257  107  2  2   45  115    75 0.997   4.91
 7.08 Intr + 163926 164021   96  2  0   51   92   112 0.984   7.19
 7.09 Intr + 170693 170901  209  1  2   76   97    23 0.164  -1.05
 7.10 Intr + 176778 176946  169  0  1   89   20   198 0.982  12.13
 7.11 Intr + 186957 187007   51  2  0   98   31    66 0.484   0.09
 7.12 Intr + 187130 187251  122  1  2   79  111    93 0.910   9.07
 7.13 Intr + 220162 220291  130  1  1   78   55    71 0.158   2.58
 7.14 Intr + 221613 221722  110  2  2   59   44    80 0.095  -1.14
 7.15 Intr + 236516 236633  118  2  1   82  116   104 0.968  12.15
 7.16 Term + 249785 249817   33  1  0   99   49    22 0.058  -3.99
 7.17 PlyA + 250019 250024    6                               1.05

 8.03 PlyA - 250352 250347    6                               1.05
 8.02 Term - 255521 255390  132  2  0   88   40    83 0.621   0.61
 8.01 Init - 262480 262442   39  1  0   60  106    46 0.655   3.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_1|139_aa
PCKMYLASPSSSAMIELTKEVKGLYNENYKRLMKEIEEDTRKWNDSPRSWLGRINTVIMS
LQPKAIYRFNAIPIKIPMTFITEIEKNNPTIYVEPQKTQNSQSHPEQKEENWRNHITYLQ
IILQSYSDQQHGTGIKTDT

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_1|420_bp
ccatgtaagatgtaccttgcttccccttcatcttctgccatgattgagctaaccaaagaa
gtgaaaggtctctacaatgaaaattataaaagactgatgaaagaaattgaagaggatacc
agaaaatggaatgatagcccacgttcatggcttggaagaatcaatactgttataatgtcc
ctgcaacccaaagcaatctatagattcaatgcaatccctataaaaataccaatgacattc
atcacagaaatagaaaaaaacaatcctacaatttatgtggaaccacaaaagacccagaat
agccaaagccaccctgagcaaaaagaagaaaactggagaaatcacattacctaccttcaa
attatactacagagctatagtgaccaacagcatggtactggcataaaaacagacacatag

>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_2|116_aa
MSLLFGESDKQIVIGCDKYYEGDVQDDKMEYNTEGKEELSGVWAVITWLCGTEASSTASW
LIVCNGQWLHADIDFVDIQMIKHTLVYSYHFKTEQETADVTHHFLWASIGLPSEEP

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_2|351_bp
atgtccctgttattcggggagtcagataaacagatagttataggttgtgacaagtactat
gaaggagatgtgcaagatgataagatggagtacaacacagagggcaaagaagagctttct
ggagtgtgggctgttataacttggctgtgtggaacagaagcttcttcaacagcttcctgg
ctcattgtgtgtaatgggcagtggctgcatgctgacattgattttgtggacatccagatg
ataaaacacacccttgtctactcttatcattttaagacagaacaggagacagcagatgtt
actcatcacttcttgtgggcatcaattgggctgccctctgaggagccctag

>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_3|168_aa
MTIRFSNKEINNDLREGSISRRIVEVKDLKQTLAIKTGYQDSNAWLEWIKYSIHTLNKSN
CYACVHSRPEAQTVPFPPGWSSSRSHVDFQDSTAWSNKLCQALSLLYPKVQHPVGQPLRV
IQLLSPNTQFTLCLSQQGGNLAFLGDLKGCSELKNFQELINQSALVHP

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_3|507_bp
atgaccattcgatttagcaataaggagatcaataacgacctcagggagggcagtatcagc
aggaggatcgtagaagttaaagacttaaaacaaactttggcaattaagacaggataccaa
gattcaaatgcctggttggaatggatcaaatattccatccacacgttaaacaaaagcaat
tgttatgcttgtgtgcacagcaggccagaggcccagactgtcccctttccaccagggtgg
tcctccagtcgatcacatgtggatttccaggattctacggcctggagtaacaagttgtgc
caagctctctctctgctatatcccaaagtccagcaccctgtgggtcagcccctgagggtc
atccagcttctgtctcccaacactcagttcactttgtgtctctcacaacaaggaggaaac
ttagcgttccttggagacctgaagggatgcagtgagcttaagaattttcaagagcttatc
aatcagtcagcccttgttcatccctga

>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_4|79_aa
MESEIIDSGDSEGWEGAAGEAPYSRSARPVRPRSDRIPQYVAPLESACLVNRRVLVSTKK
IPLRNMHGTAMKAFHYEVE

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_4|240_bp
atggagagtgaaataatagactctggagactcagaaggatgggaaggcgccgcgggagag
gccccctactcacggagcgcgcggcccgtgcgcccacgctccgaccgcattcctcagtac
gtggcacccttggaaagtgcctgtctggtcaatcgaagagtcctcgtttcgaccaaaaaa
attcccctcagaaatatgcatggcacggcaatgaaggcatttcactatgaagtggaatga

>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_5|624_aa
MCLSLAESEVFMGSECRKCMLIGLWVGPEKAPSDWPKGIKELLTPGHGLYPEQHLSDLSS
RPQSPTSALPGLLQPLPKSSPNDHLTDSLVSVSEASAARVDRSSKRRQVKPLAASLLEAL
DYDSSDDSDFKVGDASALYLPFSWFADIWYFQRREGEGKGDSEGSGNGSEDASKDSGEGS
CSDSEENILEEELNEDIKVKEEQLKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEK
EKEKEKEKEKEKEREKEKEKATVSENVAASAAATTPATSPPAVNTSPSVPTTTTATEEQV
SEPKKWNLRRNRPLLDFVSMEELNDMDDYDSEDDNDWRPTVVKRKGRSASQKEGSDGDNE
DDEDEGSGSDEDENDEGNDEDHSSPASEGGCKKKKSKVLSRNSADDEELTNDSLTLSQSK
SNEDSLILEKSQNWSSQKMDHILICCVCLGDNSEDADEIIQCDNCGITVHEGVKLQTFAV
SVTAHKGSAYPKSEQQQDLLQRAKEQSFHSVEGDPSGLPLLAGAACSYPLLWPHPHPADR
SILQRADWEAAEARREFESSAGGPALLGDPVHPPQLLAQVLSPSLPGAGSARQAHAHPEL
ALARKRLAQPRFPPVPLPPHLPAS

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_5|1875_bp
atgtgtctgagtctggctgagtctgaggtttttatgggctcagaatgtagaaagtgcatg
ctgattggtctatgggtgggcccagaaaaagcaccatctgattggccaaaaggcatcaaa
gaacttctcactcctggtcatggactctacccagaacagcatctttcggacttgtcttcg
cggccccagtccccgacctcggcgctgcctgggctcctgcagcctctccctaagtcttct
ccaaacgaccacctcacggattccttagtaagtgtatccgaggcctctgcggcgagagtg
gatcgcagctccaagaggaggcaggtgaagcctttggcagcttctctgctggaagctctt
gattatgatagttcagatgacagtgattttaaagttggagatgcctcagctctttatctc
ccatttagttggtttgctgatatttggtatttccaaagaagggaaggggaagggaaagga
gattctgaagggagtggtaatggaagtgaagatgcttcaaaggacagtggagaaggttcc
tgtagtgattctgaagaaaatattttagaagaagaactgaatgaagatattaaagtaaaa
gaagaacaacttaaaaattctgcagaggaagaagtactatcatcagaaaaacaattaatt
aaaatggaaaagaaggaagaagaagaaaatggagaaagacctagaaagaaaaaggagaaa
gagaaggaaaaagaaaaggaaaaggagaaagagaaggaaagagagaaggaaaaagaaaaa
gcaacagtatctgagaatgtggctgcttctgctgctgccaccacaccagccacaagtcct
cctgctgttaacacatccccttctgttcccactacgacaaccgctacagaggaacaagtc
agcgagccaaaaaaatggaaccttcgacgaaaccgaccacttctggattttgtgtccatg
gaagagctgaatgacatggatgactatgacagtgaggatgacaatgattggcgacctact
gtagtaaagagaaaagggagatctgcgtctcagaaagagggaagtgatggagacaatgag
gatgatgaagatgagggaagcgggagtgatgaagacgagaatgatgaaggcaatgatgaa
gatcatagtagccctgccagtgaagggggttgcaagaagaagaagagtaaagttcttagc
agaaacagtgctgatgatgaggaactgaccaatgatagcctgaccctatctcaaagcaag
agtaatgaggactcgctgattcttgagaagagtcaaaactggagctctcaaaaaatggac
catattctgatttgctgtgtttgtctgggagataatagtgaggacgctgatgaaataatt
cagtgtgacaattgtggcattacagtccatgaaggagtgaagctgcagaccttcgcggtg
agtgttacagctcataaaggcagcgcgtacccgaagagtgagcagcagcaagatttattg
caaagagcgaaagaacaaagcttccacagtgtggaaggggacccgagcgggttgccattg
ctggctggggcagcttgctcttatccccttctctggccccacccacatcctgctgatagg
tccattttacagagagctgattgggaggcagctgaggcccggcgagaatttgagagcagc
gccggcgggccagcactgctgggggacccggtgcaccctccacagctgctggcccaggtg
ctaagcccctcactgcccggggctggcagtgcccgccaagcccatgcccacccggaactc
gcgctggcccgcaagcgccttgcacagccccggttcccacccgtgcctctccctccacac
ctccccgcaagctga

>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_6|86_aa
MSPTFQQPKTLRLWRQPRYPRKSSPRRNKLDYYTIIKFLLTTESAMKKIEDNNMLVFTEE
VKANKHQIKQAVKELCDIDVAKVSTP

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_6|261_bp
atgtcacccaccttccagcagcccaagacactgagactctggaggcagcccagatatcct
cggaagagctcccccaggagaaacaagcttgactactataccatcatcaagtttctgctg
accactgagtctgccatgaagaagatagaagacaacaacatgcttgtgttcactgaggaa
gttaaagccaacaagcaccagatcaaacaggctgtgaaggagctctgtgacattgatgtg
gccaaggtgtcaacaccctaa

>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_7|673_aa
MRFHRVGQAGLELLTSGCYGVDGESDSIMSSASENSTEPWFCDACKCGVSPSCELCPNQD
GIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPVTLTEMNYSKYGAKECSFCEDPRFART
GVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPFFAYCKQHADRLDRKWKRKNYL
ALQSYCKMSLQEREKQLSPEAQARINARLQQYRAKAELARSTRPQAWVPREKLPRPLTSS
ASAIRKLMRKAELMGISTDIFPVDNSDTSSSVDGRRKHKQPALTADFVNYYFERNMRMIQ
IQENMAEQKNIKDKLENEQEKLHVEYNKLCESLEELQNLNGKLRSEGQGIWALLGRITGQ
ISYSTLITILSTCYPAFSSSTSTVFKETLVLDLDAFFSPSQSSVDCAGQVKTCDIKEKMD
TDTEVIIGGRQCSECDQAGSSDMEADMAMETLPDGTKRSRRQIKEPVKFVPQDVPPEPKK
IPIRNTRTRGRKRSFVPEEEKHEERVPRERRQRQSVLQKKPKAEDLRTECATCKGTGDNE
NLVSQRQFKETSETLLSLREHKSTASNHYLQLYSNSSSNKLEQIVVIDVLIVKFLNANTD
LTVPLTGERELDAIFQFIYGYFISCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDSS
SSKMKERNEIQRS

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_7|2022_bp
atgaggtttcaccgtgttggccaggctggtctcgaactcctcacctcaggttgttatgga
gttgatggagagagtgactctattatgagttcagcttctgaaaactccactgaaccttgg
ttttgtgatgcctgtaaatgtggtgtttctcctagctgtgaactgtgtcctaatcaggat
ggaattttcaaggagacagatgctggaagatgggttcatattgtttgtgccctgtatgtt
cctggagtagcctttggagatattgacaaattacgaccagtaacactaacggaaatgaac
tattccaaatatggtgccaaggagtgtagcttttgtgaagaccctcgctttgctagaact
ggggtttgcattagctgtgatgcagggatgtgcagagcctatttccatgtgacctgtgct
caaaaggaaggtctgctttcagaggcagcggcggaagaggatatagcagatccattcttt
gcttattgtaagcaacatgcagataggttagacagaaagtggaagagaaaaaactacttg
gctctacagtcctattgtaaaatgtctttgcaagagagagagaagcaactatcaccagaa
gcacaggcaaggatcaatgcccggcttcagcagtatcgtgccaaagcagaactagctcga
tctaccagaccccaggcctgggttccaagggaaaaattgcccagaccactcaccagcagt
gcttcagctattcgtaaacttatgcggaaagcagaactcatggggatcagtacagatatc
tttccagtggacaattcagatactagttctagtgtggatggaaggagaaaacataagcaa
ccagctctcactgcagattttgtgaattattattttgagagaaatatgcgcatgattcaa
attcaggaaaatatggctgaacaaaagaatataaaagataaattagagaatgaacaagaa
aagcttcatgtagaatataataagctatgtgaatctttagaagaactacaaaacctgaat
ggaaaacttcgaagtgaaggacaaggaatatgggctttactaggcagaatcacagggcag
atatcatattctactctaataactattttaagcacttgctatccagccttttcttccagt
accagcactgttttcaaggagacactagttctagatttggatgctttcttcagtccatcc
cagagttctgtggactgtgctgggcaggttaagacatgtgacatcaaagaaaagatggat
acagatacagaagtaattattggtggaaggcagtgctcggaatgtgaccaggcagggagc
agtgacatggaagcagatatggccatggaaaccctaccagatggaaccaaacgatcaagg
aggcagattaaggaaccagtgaaatttgttccacaggatgtgccaccagaacccaagaag
attccgataagaaacacgagaaccagaggacgaaaacgaagcttcgttcctgaggaagaa
aaacatgaggaaagagttcctagagagagaagacaaagacagtctgtgttgcaaaagaag
cccaaggctgaagatttaagaactgaatgtgcaacttgcaagggaactggagacaatgaa
aatcttgtcagccagaggcagttcaaagaaacttcagaaactttactgagcctgagggaa
cacaagtcaactgccagtaatcactaccttcagctttatagtaatagcagtagtaataaa
ctagaacaaattgtagtgatagatgttcttatcgtaaagtttttgaatgctaatacagac
ctgacagttccacttacaggagaaagggaactggatgccattttccagttcatttacggg
tatttcatatcgtgtgatgaatgcagactctgctaccattttggctgtttggatcctcct
ttgaaaaagtctcctaaacagacaggctacggatggatatgtcaggaatgtgattcttca
tcttccaagatgaaagaaagaaatgagattcagagaagttaa

>gi568815591f:10874835_11162085|GENSCAN_predicted_peptide_8|56_aa
MAANWQALATSSKDFLESWNESQKGLGSMVAYGGSITLTGFLKLGLTASSEECGLE

>gi568815591f:10874835_11162085|GENSCAN_predicted_CDS_8|171_bp
atggcagccaattggcaggcactggccacctcttctaaagatttccttgaatcctggaat
gaatcccagaaaggtcttggaagtatggtagcatatggtggtagcattacacttactggc
ttcttaaagttaggtttgactgcgtcatctgaggaatgtggcctggagtga