GENSCAN 1.0	Date run:  4-Nov-116	Time: 00:37:09

Sequence gi568815588r:86337546_86621730 : 284185 bp : 44.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1533   1745  213  2  0   56   64   139 0.298   7.21
 1.02 Term +   3613   3828  216  0  0   96   54    19 0.110  -3.56
 1.03 PlyA +   5709   5714    6                               1.05

 2.08 PlyA -   7456   7451    6                              -0.45
 2.07 Term -   9192   9036  157  2  1   55   43    87 0.121  -1.69
 2.06 Intr -  11274  11194   81  2  0  -21   61   190 0.281   4.15
 2.05 Intr -  12396  12348   49  1  1  110   72    54 0.204   3.74
 2.04 Intr -  20296  20165  132  2  0   56   38    93 0.162   1.72
 2.03 Intr -  25998  25645  354  1  0   30   80   135 0.464   2.16
 2.02 Intr -  26551  26396  156  2  0  111  113   379 0.998  42.68
 2.01 Init -  28847  28769   79  2  1   87  111   109 0.970  14.41
 2.00 Prom -  36777  36738   40                              -6.66

 3.03 PlyA -  37599  37594    6                               1.05
 3.02 Term -  39865  39732  134  2  2   67   42   122 0.031   3.75
 3.01 Init -  52442  52373   70  2  1   54   41   126 0.089   3.71
 3.00 Prom -  58993  58954   40                              -2.66

 4.02 PlyA -  60385  60380    6                               1.05
 4.01 Sngl -  62852  62523  330  2  0   69   44   318 0.954  19.52
 4.00 Prom -  66740  66701   40                              -5.06

 5.00 Prom +  66811  66850   40                              -1.36
 5.01 Init +  74065  74201  137  0  2   76   88    37 0.855   2.11
 5.02 Intr +  78199  78354  156  1  0   47   39   100 0.464   0.13
 5.03 Term +  86005  86152  148  1  1   10   42   186 0.837   3.57
 5.04 PlyA +  87381  87386    6                               1.05

 6.16 PlyA -  87713  87708    6                               1.05
 6.15 Term -  98455  98372   84  1  0   67   42    63 0.501  -2.75
 6.14 Intr - 100470 100375   96  0  0  118   93    -2 0.695   3.51
 6.13 Intr - 105818 105730   89  0  2   71  100    38 0.912   2.99
 6.12 Intr - 108904 108697  208  1  1   38   71   198 0.982  11.75
 6.11 Intr - 114586 114422  165  1  0   49  115    55 0.956   4.46
 6.10 Intr - 115790 115675  116  0  2   83  119    75 0.999  10.27
 6.09 Intr - 116286 116111  176  2  2   70   95   119 0.990  10.38
 6.08 Intr - 121520 121444   77  2  2  110   97     1 0.950   1.51
 6.07 Intr - 129917 129734  184  1  1   -9   76   190 0.090   7.89
 6.06 Intr - 134799 134663  137  0  2   70   82   131 0.454  10.07
 6.05 Intr - 136428 136333   96  0  0   64   98    40 0.636   2.81
 6.04 Intr - 159774 159656  119  1  2   35  114    79 0.922   5.38
 6.03 Intr - 163198 162173 1026  2  0   97  110   413 0.823  34.96
 6.02 Intr - 180546 180026  521  2  2   85  111   290 0.665  23.60
 6.01 Init - 198985 198852  134  1  2   62   90   133 0.216   8.52
 6.00 Prom - 227530 227491   40                              -3.46

 7.06 PlyA - 228820 228815    6                               1.05
 7.05 Term - 229174 229042  133  0  1   54   48   143 0.115   4.46
 7.04 Intr - 260870 260772   99  1  0   88   84    16 0.106   0.43
 7.03 Intr - 274677 274537  141  2  0  -15  101   123 0.109   2.77
 7.02 Intr - 281348 280256 1093  0  1   15   53   379 0.215  16.17
 7.01 Intr - 282264 282242   23  2  2  104   97    44 0.625   4.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  39637  39986  350  0  2   42   44   210 0.801   8.78
S.002 Sngl + 243655 243927  273  0  0  114   48   104 0.829   4.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:86337546_86621730|GENSCAN_predicted_peptide_1|142_aa
ASSTYHVHPEPQHPTQCLVPGPNKTPVNICEVNKCSLPCHTWTSPRSLPGILHFRETSPE
LQGKAGEEEEEVSFKKPPAPGTVPDPPGPSFQLSPLKHKNKGSRVLLEIARKPYHRQGAL
DAPEPALPTKQSRRMEEKMGLG

>gi568815588r:86337546_86621730|GENSCAN_predicted_CDS_1|429_bp
gcaagctccacgtaccatgtccaccctgaaccccagcacccaacacagtgcctggtgcct
ggcccaaacaagacaccagtgaacatctgtgaagtgaacaaatgctctctgccctgccac
acctggacatctcctaggagcctcccaggaatcctgcactttcgagaaacatctcctgag
ctgcaagggaaggcaggggaggaggaggaggaggtttcatttaagaaaccccctgctcca
gggactgtccctgatcccccaggtccatcctttcaacttagtcccctaaaacacaaaaac
aaagggagcagagtgcttctagagatagcaagaaaaccctaccaccgacagggagctctg
gatgccccagagcctgcactgcccactaaacagtcccggaggatggaggagaagatggga
ctaggatga

>gi568815588r:86337546_86621730|GENSCAN_predicted_peptide_2|335_aa
MEALTLWLLPWICQCVSVRADSIIHIGAIFEENAAKDDRVFQLAVSDLSLNDDILQSEKI
TYSIKVIEANNPFQAVQEVARCFPRFEVRSAQRLEPDLSPSPGHNLVGAAFRAPRPPEPQ
PGASLQRSSTRFGGAGFSLAVRAAGGGAAAWAGGGRCSPRKGAELGRSGCGEILAYAGAA
LVHSHCLRSGPAAGATGLLPVITAVDEAAGIDSLELGPGSPLWIPHKPVLNSRCQGAELT
GVLVGNDVINLFVRAIRQDSEVCDESQYALIGTGECFRELLDVSLCLSFCLVGPMPGAAV
DFGKLGCCWEVAALSAKAWLLPPGQRLLRSERLIE

>gi568815588r:86337546_86621730|GENSCAN_predicted_CDS_2|1008_bp
atggaagcgctgacgctgtggcttctcccctggatatgccagtgcgtgtcggtgcgggcc
gactccatcatccacatcggtgccatcttcgaggagaacgcggccaaggacgacagggtg
ttccagttggcggtatccgacctgagcctcaacgatgacatcctgcagagcgagaagatc
acctactccatcaaggtcatcgaggccaacaacccattccaggctgtgcaggaagtggcc
cggtgttttcctcgcttcgaggtgaggagcgcccagcggctggagcccgacctgtctcct
tctcccgggcataacctggtaggcgcggcgtttcgcgccccgcggcccccagagcctcag
cccggcgcttctctgcagcgctcctccaccaggtttggaggagccggtttctctctcgct
gtccgcgccgcgggcggaggcgccgccgcctgggccggaggtgggcgctgttcgcccagg
aaaggagcggagctgggccggtccggctgcggggaaatcctggcctacgccggggccgcc
cttgtccacagccactgcctccggtcgggccccgcggcaggcgccacagggctactgcca
gtgataacagctgtggatgaggctgcaggcattgatagtctggagttaggccctgggtcc
cctctctggattccccacaagcccgtgctgaactcacggtgtcagggtgctgaactcaca
ggcgtcctcgtcggcaatgatgttattaatttatttgtgagggccatcaggcaggacagc
gaggtctgtgatgagtctcagtacgcactgatcggcactggtgaatgcttccgggagctc
ctggatgtcagcctctgtttatccttctgcctagtggggccaatgcctggggctgccgtg
gacttcgggaagctgggctgctgctgggaggtggctgccttatcagcaaaggcctggctc
ctgcctcctgggcagcgtctgctccgctctgaacgattaattgaatag

>gi568815588r:86337546_86621730|GENSCAN_predicted_peptide_3|67_aa
MARRGSRALSAGWAAVMGQTRKGRGSIALRLLLGGAGDWAWKPRLAAACALAASLALSPA
ESADQPV

>gi568815588r:86337546_86621730|GENSCAN_predicted_CDS_3|204_bp
atggctcgccgcgggtctcgggcgctgtcagccgggtgggccgcagtgatgggtcagacc
aggaaggggcggggcagcattgcactgcggctgctcctgggcggcgccggcgactgggct
tggaaaccgcgcctcgcggcggcctgcgccctcgctgcgtccctcgcgctgtcacctgcg
gaatcggcagaccagcccgtgtag

>gi568815588r:86337546_86621730|GENSCAN_predicted_peptide_4|109_aa
MRWDCRPPAAPPAASALPLLSCQSSGFCRSSAVRLGSGFPAPLAVSARVSRLAPDRMVQL
PQGRSRGSSLIASSAPTAPLRGRLGLIARKSAWSLPWAGWARSSRAVVL

>gi568815588r:86337546_86621730|GENSCAN_predicted_CDS_4|330_bp
atgcgctgggattgcaggcctccagcggccccgcccgccgcctccgccctcccgctcctg
agctgccaatccagcgggttctgccggtcctcggccgtgcgtctggggtctggattcccg
gctccactcgccgtgagcgcgcgtgtcagccgactcgccccggaccgcatggtgcagctc
ccgcagggccgcagccgcgggtcgtcgctgattgccagctccgcgcccactgcaccgctg
cgcggccgcctagggctcattgcgcggaagtcggcctggtccctcccctgggctggatgg
gcccgctcctcccgagcggtcgtgctctga

>gi568815588r:86337546_86621730|GENSCAN_predicted_peptide_5|146_aa
MHQPLTQQIISGNTHSAQTGNSVHFRAVSSQMQGALLLQSRLEELRKNHETEKFGNAYTE
ATGVATQEGQHGVSEPPAAVGIKQTWFQILILPACDLSLNGYYQKAKTDDAGKPVSENWY
TAGGNVNSYSHYGKQVPRKTKYRSAI

>gi568815588r:86337546_86621730|GENSCAN_predicted_CDS_5|441_bp
atgcatcagcctctgacccagcagattatttcaggaaacacccacagtgctcagacagga
aattctgtgcacttcagagctgtgagctcacagatgcagggagcattgctgttacagtcc
agactagaagaattgaggaaaaaccatgaaacagaaaaattcgggaatgcgtacacagag
gctacaggagtggccacccaggaaggacagcatggggtctcggaacccccagctgctgtg
ggaatcaagcagacctggtttcaaattctgatcctgcctgcatgtgacctcagtttaaat
ggctattatcaaaaagccaaaactgacgatgccggcaagcctgtctcggagaactggtac
actgctggtgggaatgtaaactcgtacagccactatggaaaacaggttcctcgaaaaact
aaatacagaagtgcaatatga

>gi568815588r:86337546_86621730|GENSCAN_predicted_peptide_6|1075_aa
MRSRAGPGSALAPAFGARTVPQSSRDTGPAGKVTCATKAAQAAPREYETGVKMTSRFGKT
YSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPKKPKVEEES
TGDPFGFDSDDESLPVSSKNLAQVKCSSYSESSEAAQLEEVTSVLEANSKISHVVVEDTV
VSDKCFPLEDTLLGKEKSTNRIVEDDASISSCNKLITSDKVENFHEEHEKNSHHIHKNAD
DSTKKPNAETTVASEIKETNDTWNSQFGKRPESPSEISPIKGSVRTGLFEWDNDFEDIRS
EDCILSLDSDPLLEMKDDDFKNRLENLNEAIEEDIVQSVLRPTNCRTYCRANKTKSSQGA
SNFDKLMDGTSQALAKANSESSKDGLNQAKKGGVSCGTSFRGTVGRTRDYTVLHPSCLSV
CNVTIQDTMERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEF
FGFEDHETGGDEGGSGSSNYKIKYFGFDDLSESEDDEDDDCQVERKTSKKRTKTAPSPSL
QPPPESNDNSQDSQSGTNNAENLDFTEDLPGVPESVKKPINKQGDKSKENTRKIFSGPKR
SPTKAVYNARHWNHPDSEELPGPPVVKPQSVTLYTVVQHVKHFNDVVEFGENQEFTDDIE
YLLSGLKSTQPLNTRCLRDRLNMDLDRASLDLMIRLLELEQDASSAKLLNEKDMNKIKEK
IRRLCETVHNKHLDLENITVTVHNPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNRA
EDSICLADSKPLPHQNVTNHVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTGEQDGLIGTA
LNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLVNMETSCSFDSSICSGEGD
DSLRIGGQVHAVQALVQLFLERERAAQLAESKTDELIKDAPTTQHDKSGEWQETSGEIQW
VSTEKTDGTEEKHKKEEEDEELDLNKALQHAGKHMEDCIVASYTALLLGCLCQESPINVT
TVREYLPEGDFSIMTEMLKKFLSFMNLTNIVRQCNVGTIEIVFALSIKASLAKYF

>gi568815588r:86337546_86621730|GENSCAN_predicted_CDS_6|3228_bp
atgcgatctcgagcgggccctggctcagcgctggcgcccgctttcggagccaggactgtc
cctcagagcagccgggacactggcccggccgggaaggtcacctgcgcaacaaaggcggcc
caggcagccccaagagaatatgaaactggtgtcaaaatgacatccagatttgggaaaaca
tacagtaggaaaggtggaaatggcagttcaaaattcgatgaagtcttttccaacaaacgg
actacccttagcacaaaatggggagagaccacatttatggctaaattagggcagaagagg
cccaatttcaaaccagatatccaagaaattccgaagaaacctaaagtggaagaagaaagt
actggagatccttttggatttgatagtgatgatgagtctctaccagtttcttcaaagaat
ttagcccaggttaagtgttcctcttattcagaatctagtgaagctgctcagttggaagag
gtcacttcagtacttgaagctaatagcaaaattagtcatgtggtcgttgaagacactgtc
gtttctgataaatgcttccctttggaggacactttacttgggaaagaaaagagcacaaac
cgaattgtagaagatgatgcaagcataagtagctgtaataaattaataacttcagataaa
gtggagaattttcatgaagaacatgaaaagaatagtcaccatattcacaaaaatgctgat
gacagtactaagaaacccaatgcagaaactacagtggcttctgaaatcaaggaaacaaat
gatacttggaactcccagtttgggaaaaggccagaatcaccatcagaaatatctccaatc
aagggatctgttagaactggtttgtttgaatgggataatgattttgaagatatcagatca
gaagactgtattttaagtttggatagtgatccccttttggagatgaaggatgacgatttt
aaaaatcgattggaaaatctgaatgaagccattgaggaagatattgtacaaagtgttctt
aggccaaccaactgtaggacgtactgtagggccaataaaacgaaatcctcccaaggagca
tcaaattttgataagctgatggacggcaccagtcaggccttagccaaagcaaacagtgaa
tcgagtaaagatggcctgaatcaggcaaagaaagggggtgtaagttgtgggaccagtttt
agagggacagttggacggactagagattacactgttttacatccatcttgcttgtcagtt
tgtaatgttaccatacaggatactatggaacgcagcatggatgagttcactgcatccact
cctgcagatttgggagaagctggtcgtctcagaaaaaaggcagatattgcaacttctaag
actactactagatttcgacctagtaatactaaatccaaaaaggatgttaaacttgaattt
tttggttttgaagatcatgagacaggaggtgatgaaggaggttctggaagttctaattac
aaaattaagtattttggctttgatgatctcagtgaaagcgaagatgatgaagatgatgac
tgtcaagtagaaagaaagacaagcaaaaaaagaactaaaacagctccatcaccctccttg
cagcctcccccagaaagcaatgataattcccaggacagtcagtctggtactaacaatgca
gaaaacttggattttacagaggacttgcctggtgtgcctgaaagtgtgaagaagcccata
aataaacaaggagataaatcaaaggaaaataccagaaagatttttagtggccccaaacgg
tcacccacaaaagctgtatataatgccagacattggaatcatccagattcagaagaactg
cctgggccaccagtagtaaaacctcagagtgtcacattatatactgttgttcagcacgtg
aagcacttcaacgatgttgtagaatttggtgaaaatcaagagttcactgatgacattgag
tacttgttaagtggcttaaagagcactcagcctctaaacacacgttgccttagagatcgt
ttgaacatggatcttgatagagctagcttagatctaatgattcgacttttggaactggaa
caagatgcttcatcagccaagctactgaatgaaaaagacatgaacaaaattaaagaaaaa
atccgaaggctctgtgaaactgtacacaacaagcatcttgatctagaaaatataacggta
actgtgcataatcccgaaaatcaaagctacttgatagcatataaagattcccaacttatt
gtttcatcagctaaagcattacagcattgtgaagaactgattcagcagtacaaccgtgct
gaggacagcatatgcttagctgacagtaagcctctgcctcaccagaatgtaactaaccat
gtaggcaaagcagtggaggactgcatgagggccatcatcggggtgttgcttaatttaact
aatgataatgagtggggcagcaccaaaacaggagagcaggacggtctcataggcacagcg
ctgaactgtgtgcttcaggttccaaagtacctacctcaggagcagagatttgatattcga
gtgctgggcttaggtctgctgataaatctagtggagtatagtgctcggaatcggcactgt
cttgtcaacatggaaacatcgtgctcttttgattcttccatctgtagtggagaaggggat
gatagtttaaggataggtggacaagttcatgctgtccaggctttagtgcagctattcctt
gagcgagagcgggcagcccagctagcagaaagtaaaacagatgagttgatcaaagatgct
cccaccactcagcatgataagagtggagagtggcaagaaacaagtggagaaatacagtgg
gtgtcaactgaaaagactgatggtacagaagagaaacataagaaggaggaggaggatgaa
gaacttgacctcaataaagcccttcagcatgccggcaaacacatggaggattgcattgtg
gcctcctacacagcactacttcttgggtgtctctgccaggaaagtccaatcaatgtaacc
actgtgcgggaatatctgccagaaggagacttttcaataatgacagagatgctcaaaaaa
tttttgagttttatgaatctcactaacatagtacgccagtgtaacgtgggaaccattgag
attgtatttgccctgagtattaaagctagcttagcaaaatacttttaa

>gi568815588r:86337546_86621730|GENSCAN_predicted_peptide_7|496_aa
XKKEPIMLENEIPGIQLTSDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIGKMA
ILPKVIYRFNAIPIKLPMIFFTELEKTTLKFIWNQKRARIAKSMLSQKNKAGGIMLPDFK
LYYKATVTKTAWYWYQNRNIDQWNRTEPSEIMPCIYNYLIFDKPEKNKQWGKDSLFNKWC
WENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMS
KTPKAMATKAKIDKWDVIKLNSFCTAKETTIRVNRQATEWEKIFAIYSSDKGIISRIYNE
LQQIYKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYHLTP
VRMAIIKKSGNNRNNGKPLARLGAVMDALLDQKHSGHPAGTGGMEVSVRPAKAANSRGGR
TLTKAKPKSLWIYITQKSHHWGCLDDASISEFLKISPLCNKSKVQKPESKETVCQASELK
LSHHIPCDLHVYIQMA

>gi568815588r:86337546_86621730|GENSCAN_predicted_CDS_7|1491_bp
nngaaaaaggagcccatcatgcttgagaatgaaataccaggaattcaacttacaagcgat
gtgaaggacctcttcaaggagaactataaaccactgctcaatgaaataaaagaggataca
aacaaatggaagaacattccatgctcatgggtaggaagaatcaacatcgggaaaatggcc
atactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgattttc
ttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatc
gccaagtcaatgctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaa
ctatactacaaggccacagtaaccaaaacagcatggtactggtaccaaaacagaaatata
gaccaatggaacagaacagagccctcagaaattatgccgtgtatctacaactatctgatc
tttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgc
tgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttat
acaaaaattaattcgagatggattaaagacttaaatgttagacctaaaactataaaaacc
ctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtct
aaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatgtaattaaacta
aatagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaagctacagaatgg
gagaaaatttttgcaatctactcatctgacaaagggataatatccagaatctacaatgaa
ctccaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggatatg
aacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctca
tcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacacca
gttagaatggcaatcattaaaaagtcaggaaacaacaggaacaatggcaagcctttagcc
agattgggagcagtaatggacgccttgctggatcagaagcacagcggacaccctgccgga
accggagggatggaagtcagcgtcaggcctgcaaaggcggcaaacagccgtggtggacgg
accctgactaaagcaaagcctaaaagtttgtggatttacatcacccagaaatctcatcat
tggggatgtcttgatgatgccagcatttctgaatttctgaaaatatcacctctgtgcaac
aagtctaaagttcagaaacctgaatccaaggaaactgtatgtcaggcctctgagctcaag
ctaagccatcatatcccctgtgacctgcacgtgtacatccagatggcctga