GENSCAN 1.0	Date run:  4-Nov-116	Time: 00:29:25

Sequence gi568815595r:63910671_64123419 : 212749 bp : 41.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1929   2253  325  2  1   54  113   477 0.982  42.34
 1.02 Term +   2487   2740  254  1  2   98   39   146 0.542   5.52
 1.03 PlyA +   6788   6793    6                               1.05

 2.03 PlyA -   7939   7934    6                               1.05
 2.02 Term -   8425   8232  194  2  2   -5   42   247 0.313   7.40
 2.01 Init -  13680  13539  142  0  1   86   26   138 0.535   7.74
 2.00 Prom -  16478  16439   40                              -3.75

 3.00 Prom +  37723  37762   40                              -3.75
 3.01 Init +  41711  41813  103  1  1   88  115    33 0.753   6.45
 3.02 Intr +  45179  45284  106  0  1   35   85   114 0.089   4.15
 3.03 Intr +  53765  53790   26  2  2  112   30    30 0.004  -3.65
 3.04 Intr +  55846  55913   68  2  2  101   37    77 0.001   1.61
 3.05 Intr +  62383  62433   51  0  0   69   38    98 0.003   1.09
 3.06 Intr +  64011  64080   70  2  1   30  100    77 0.165   0.94
 3.07 Intr +  69245  69497  253  0  1  112   82    91 0.408   6.47
 3.08 Intr +  71516  71775  260  2  2   78   93   149 0.386  10.58
 3.09 Intr +  72269  72351   83  0  2   80  100    69 0.997   5.74
 3.10 Intr +  77389  77654  266  0  2  112  121   150 0.999  16.09
 3.11 Intr +  78510  78629  120  0  0   59   75    70 0.736   1.49
 3.12 Intr +  79506  79704  199  0  1   45   84   215 0.962  15.23
 3.13 Intr +  80068  80189  122  0  2   76   81    69 0.990   3.37
 3.14 Intr +  84835  85813  979  1  1  104   91   548 0.929  46.70
 3.15 Intr +  86951  87017   67  1  1   88   54    50 0.868  -0.84
 3.16 Intr +  89938  89999   62  2  2   80  101   110 0.660   9.03
 3.17 Term +  99027  99080   54  2  0   94   42    37 0.058  -3.72
 3.18 PlyA +  99312  99317    6                               1.05

 4.08 PlyA -  99907  99902    6                               1.05
 4.07 Term - 100094  99998   97  1  1   78   42    63 0.368  -2.84
 4.06 Intr - 102937 102769  169  2  1   67   89   238 0.859  19.88
 4.05 Intr - 108037 107929  109  1  1   42   82    96 0.962   3.34
 4.04 Intr - 108367 108148  220  0  1   89   90   179 0.994  15.58
 4.03 Intr - 108771 108626  146  0  2   91   75   107 0.997   7.86
 4.02 Intr - 111853 111648  206  2  2   64   87   366 0.995  32.10
 4.01 Init - 112749 112605  145  0  1  105   51   313 0.995  29.63
 4.00 Prom - 121462 121423   40                              -6.05

 5.00 Prom + 124319 124358   40                              -4.35
 5.01 Init + 125957 126041   85  1  1   43   64    52 0.036  -0.67
 5.02 Intr + 128675 128805  131  0  2  109   85    33 0.029   4.59
 5.03 Intr + 129421 129628  208  0  1  102   47    78 0.033   2.83
 5.04 Term + 151593 151711  119  1  2  118   48    61 0.739   2.82
 5.05 PlyA + 151844 151849    6                               1.05

 6.05 PlyA - 151952 151947    6                               1.05
 6.04 Term - 167913 167714  200  1  2    0   48   211 0.850   4.88
 6.03 Intr - 168565 168445  121  1  1   52   73    75 0.470   1.55
 6.02 Intr - 176326 176207  120  1  0   81  110    51 0.579   6.37
 6.01 Init - 181039 180956   84  1  0   59  116    53 0.905   6.07
 6.00 Prom - 187008 186969   40                              -6.15

 7.04 PlyA - 187730 187725    6                              -0.45
 7.03 Term - 189255 188381  875  1  2  121   34   948 0.850  84.48
 7.02 Intr - 198415 198269  147  2  0   37  -14   189 0.001   2.89
 7.01 Init - 200638 200590   49  1  1   84   61    33 0.003   1.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  49761  49549  213  0  0   79   49   152 0.817   6.65
S.002 Init - 126516 126442   75  0  0   53   70   101 0.921   5.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:63910671_64123419|GENSCAN_predicted_peptide_1|192_aa
MSERAADDVRGEPRRAAAAAGGAAAAAARQQQQQQQQQQPPPPQPQRQQHPPPPPRRTRP
EDGGPGAASTSAAAMATVGERRPLPSPEVMLGQSWNLWVEASKLPGKDGTELDESFKEFG
KNREVMGLCREGESSPPDGVCTNPWEVSLTVHWDREHQPTIPTPRLPVPAKMLPEEGGRG
QSAWKVWFGGLL

>gi568815595r:63910671_64123419|GENSCAN_predicted_CDS_1|579_bp
atgtcggagcgggccgcggatgacgtcaggggggagccgcgccgcgcggcggcggcggcg
ggcggagcagcggccgcggccgcccggcagcagcagcagcagcagcagcagcagcagccg
ccgcctccgcagccccagcggcagcagcacccgccaccgccgccacggcgcacacggccg
gaggacggcgggcccggcgccgcctccacctcggccgccgcaatggcgacggtcggggag
cgcaggcctctgcccagtcctgaagtgatgctgggacagtcgtggaatctgtgggttgag
gcttccaaacttcctgggaaggacgggacagaattggacgaaagtttcaaggagtttggg
aaaaaccgcgaagtcatggggctctgtcgggaaggtgagtccagcccccctgatggagtt
tgtacaaacccctgggaagtttcattgacagttcactgggaccgggaacatcagcccacc
ataccgactccccgactccccgtgcctgcgaagatgctgcctgaggagggagggaggggg
cagagcgcttggaaagtttggtttgggggcctcctgtaa

>gi568815595r:63910671_64123419|GENSCAN_predicted_peptide_2|111_aa
MLQIVYSTADTTAAHECPLSTSKAVWPKSELLTLSLPHSPAFLSSLSGKIWPTRCNWGKV
PATGGSFWVSGGSCTYALVKSLQGRRHAQELSARTMPTVTATLILIYGGVS

>gi568815595r:63910671_64123419|GENSCAN_predicted_CDS_2|336_bp
atgctccagattgtgtattcaactgctgacaccacagccgcacatgaatgcccactaagt
acgtcaaaagcagtgtggccaaaatcagagctgctgaccctaagtctcccacattcgcca
gcattcctcagttcattaagtggcaagatttggcccacacgctgcaactggggaaaagtc
cctgctacaggagggtctttctgggtctctgggggttcctgcacctacgcgttagtgaag
agcttacaaggaaggagacacgcacaggagctgtcagcaaggacaatgcccactgtcacg
gccacgctgattctcatctatggaggtgtttcttaa

>gi568815595r:63910671_64123419|GENSCAN_predicted_peptide_3|962_aa
MPIFGFCPAHDDFYLVVCNDCNQVVKPQAFQSHYAGSSVKTTATRTRKHATVAASLVKSV
SVGGKTILNCWYDWSPYKVSSKGFHSFGLYERYCKESGGKKQPCKVGLATEDAANEDGHG
AWHVVSTQYTVAAVVDVVVLEERRHSSSSKPPLAVPPTSVFSFFPSLSKSKGGSASGSNR
SSSGGVLSASSSSSKLLKSPKEKLQLRGNTRPMHPIQQSRVPHGRIMTPSVKVEKIHPKM
DGTLLKSAVGPTCPATVSSLVKPGLNCPSIPKPTLPSPGQILNGKGLPAPPTLEKKPEDN
SNNRKFLNKRLSEREFDPDIHCGVIDLDTKKPCTRSLTCKTHSLTQRRAVQGRRKRFDVL
LAEHKNKTREKELIRHPDSQQPPQPLRDPHPAPPRTSQEPHQNPHGVIPSESKPFVASKP
KPHTPSLPSMLEEPSEEAPQSVVRTWPEISSPSPFFGHLLIEVFASRKMPPGCPAQQGGS
APIDPPPVHESPHPPLPATEPASRLSSEEGEGDDKEESVEKLDCHYSGHHPQPASFCTFG
SRQIGRGYYVFDSRWNRLRCALNLMVEKHLNAQLWKKIPPVPSTTSPISTRIPHRTNSVP
TSQCGVSYLAAATVSTSPVLLSSTCISPNSKSVPAHGTTLNAQPAASGAMDPVCSMQSRQ
VSSSSSSPSTPSGLSSVPSSPMSRKPQKLKSSKSLRPKESSGNSTNCQNASSSTSGGSGK
KRKNSSPLLVHSSSSSSSSSSSSHSMESFRKNCVAHSGPPYPSTVTSSHSIGLNCVTNKA
NAVNVRHDQSGRGPPTGSPAESIKRMSVMVNSSDSTLSLGPFIHQSNELPVNSHGSFSHS
HTPLDKLIGKKRKCSPSSSSINNSSSKPTKVAKVPAVNNVHMKHTGTIPGAQGLMNSSLL
HQDISSPCLRTGISATSPQSPDLKYVYLDVVGDESRHQGKGVGENQIQLPVQSMPPNAVS
ET

>gi568815595r:63910671_64123419|GENSCAN_predicted_CDS_3|2889_bp
atgccaatatttggtttctgtccagcccatgatgatttctacttggtggtgtgtaacgac
tgtaatcaggttgtcaaaccgcaggcatttcaatcacattatgcaggcagttccgttaaa
accactgctaccaggacaagaaaacatgctaccgtggcagcaagtcttgtaaaatcagtc
agtgttggtggtaaaactattctgaattgttggtatgactggtcaccttataaagtgtct
tctaagggcttccatagttttggattgtatgaacgttactgtaaggaatctgggggaaaa
aaacagccctgcaaagtaggcttggcaactgaagacgctgccaacgaggatggacatggt
gcctggcatgtggtttctacacagtacacagtagcagctgttgttgatgttgttgttctt
gaagaaagaagacatagctcatccagcaagccgcctttggccgttcctcccacttcagta
ttttccttcttcccttctctgtccaaaagcaaaggaggcagtgcaagtggaagcaaccgt
tcttccagtggaggtgttcttagcgcatcctcatcaagttccaagttgttgaaatcaccc
aaagagaaactgcagctcagggggaacaccaggccaatgcatcccattcagcaaagtaga
gttccccatggtagaatcatgacaccctctgtgaaagtggaaaagattcatccgaaaatg
gatggcacactactgaaatctgcggtggggccaacctgtcctgctactgtgagttcctta
gtcaagcctggccttaactgcccctcaataccaaagccaaccttgccttcacctggacag
attctgaatggcaaagggcttcctgcaccgcccactctggaaaagaaacctgaagacaat
tccaataataggaaatttttaaataagagattatcagaaagagagtttgatcctgacatc
cactgtggggttattgatctcgacaccaagaagccctgcacccggtctttgacatgcaag
acacattccttaacccagcgcagggctgtccagggtagaagaaaacgatttgatgtgtta
ttagccgagcacaaaaacaaaaccagggaaaaggaattgattcgccatccggactctcag
caaccaccgcagcctctcagggacccgcatcccgcccctcctagaacgtcacaggagccg
caccaaaaccctcacggagtgattccttccgaatcaaagccttttgtagctagtaaacct
aaacctcacacccccagtcttccaagtatgctggaggagccatcagaggaggctcctcag
agtgtggtcaggacctggccagagatttcctccccaagtcctttctttggtcatcttctc
attgaagtttttgcatctagaaaaatgcctccaggctgccctgctcagcaaggtgggagt
gcccccattgaccctcctccagtccatgaatctccacaccctcccctgcctgccactgag
ccagcttctcggttatccagtgaggagggcgaaggcgatgacaaagaagagtctgttgaa
aaactggactgtcattattcaggtcatcatcctcagccagcatctttttgcacatttggg
agccggcagataggaagaggctattacgtgtttgactccaggtggaatcgacttcgctgc
gccctcaacctcatggtggagaagcatctgaatgcacagctatggaagaaaatcccacca
gtgcccagtaccacctcacccatctccacacgtattcctcaccggacaaactctgtgccg
acatcacaatgtggagtcagctatctggcagcagccaccgtctctacatccccagtcctg
ctctcatctacctgcatctccccaaatagcaaatcggtaccagctcatggaaccacacta
aatgcacagcctgctgcttcaggggcgatggatcctgtgtgcagtatgcaatccagacaa
gtgtcctcttcatcctcatccccttccacgccctctggcctttcctcggttccttcctcc
cccatgtccaggaaacctcagaaattgaaatccagcaaatctttgaggcccaaggagtct
tctggtaacagcactaactgtcaaaatgccagtagcagtaccagtggcggctcaggaaag
aaacgcaaaaacagttccccactgttggttcactcttcctcctcctcttcctcctcctcc
tcttcttctcattccatggagtcttttaggaaaaactgtgtggctcactctgggcctccc
tacccctcaacggtaacatcttcccatagcatcggcctcaactgtgtgacgaataaagca
aatgcggtgaacgtccggcatgaccagtcagggaggggcccccccaccgggagccctgct
gaatccatcaagaggatgagtgtgatggtgaacagcagtgattctactctttctcttggg
ccattcattcaccagtccaatgaactgcctgtcaactcccacggcagtttttcccactca
cacactcctctagacaaactcataggaaagaaaagaaagtgctcacccagctcgagcagc
atcaacaacagcagcagcaaacccacaaaggttgccaaagtgccagccgtgaacaatgtc
cacatgaaacacacaggcaccatcccaggggcacaaggactgatgaacagttccctcctt
catcaggatatctcctcaccttgcttacgaacaggaatttcagcaacatcaccccagagc
cctgacttaaaatatgtttatttggatgtggttggggacgagagcagacaccaaggaaag
ggagttggagagaatcaaatccagctgcctgtacaatccatgccaccgaatgccgtaagt
gagacgtaa

>gi568815595r:63910671_64123419|GENSCAN_predicted_peptide_4|363_aa
MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS
LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA
LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQPDSKNWQYQETIKKGDLLLNRVQKLSRV
INM

>gi568815595r:63910671_64123419|GENSCAN_predicted_CDS_4|1092_bp
atgccgctggagaacctggaggaggagggtctgcccaagaaccccgacttgcgtatcgcg
cagctgcgcttcctgctcagcctgcccgagcaccgcggagacgctgccgtgcgcgacgag
ctgatggcggccgtccgcgataacaacatggctccttactatgaagccttgtgcaaatcc
ctcgactggcagatagacgtggacctactcaataaaatgaagaaggcaaatgaagatgag
ttgaagcgtttggatgaggagctggaagatgcagagaagaatctaggagagagcgaaatt
cgcgatgcaatgatggcaaaggccgagtacctctgccggataggtgacaaagagggagct
ctgacagcctttcgcaagacatatgacaaaactgtggccctgggtcaccgattggatatt
gtattctatctccttaggattggcttattttatatggataatgatctcatcacacgaaac
acagaaaaggccaaaagcttaatagaagaaggaggagactgggacaggagaaaccgccta
aaagtgtatcagggtctttattgtgtggctattcgtgatttcaaacaggcagctgaactc
ttccttgacactgtttcaacatttacatcctatgaactcatggattataaaacatttgtg
acttatactgtctatgtcagtatgattgccttagaaagaccagatctcagggaaaaggtc
attaaaggagcagagattcttgaagtgttgcacagtcttccagcagttcggcagtatctg
ttttcactctatgaatgccgttactctgttttcttccaatcattagcggttgtggaacag
gaaatgaaaaaggactggctttttgcccctcattatcgatactatgtaagagaaatgaga
attcatgcatacagtcagctgctggaatcatataggtcattaacccttggctatatggca
gaagcgtttggtgttggtgtggaattcattgatcaacctgatagcaagaactggcagtac
caagaaactatcaagaaaggagatctgctactaaacagagttcaaaaactttccagagta
attaatatgtaa

>gi568815595r:63910671_64123419|GENSCAN_predicted_peptide_5|180_aa
MLVLGDASPLSDNPPEAGTLGRKVIAPKDIKSLHWLSFNPAHPDLQTLHSGTVARTVGCA
AVLGVRRCVGLLINSVQCLYSDESLDHQAVPQMAMLHCPETDCPYTVTFSPLCLTALRRM
SWNVTEPSQNSASPPKQSKAKGWSIVHLGRNPRIQRALFTNLKEMARGYLPVCLMKIIQK

>gi568815595r:63910671_64123419|GENSCAN_predicted_CDS_5|543_bp
atgcttgtgcttggcgacgcaagccccctgagtgacaatcctccagaagcaggcacttta
gggaggaaagtcattgctccaaaagatataaaatctctacactggctctcttttaatcct
gcccatcctgatttgcaaacccttcacagtggcactgtggctagaacagttggctgtgct
gctgtgctgggtgttcgcaggtgtgtgggtttgctgatcaacagtgttcagtgtctgtat
tctgatgaatcactcgaccaccaagcagtgcctcagatggccatgttgcattgccctgag
acagactgcccttacacagtgacattttccccgctatgtctcacagctttgaggcgtatg
tcatggaatgtcacagagccaagtcagaactctgcttccccgccaaagcaaagcaaagca
aaggggtggtccattgttcacttgggcagaaaccctcggattcagagggctctttttact
aatctaaaggaaatggcaagagggtatctccctgtctgccttatgaagataatacagaaa
tga

>gi568815595r:63910671_64123419|GENSCAN_predicted_peptide_6|174_aa
MRQLAVGVEAKRMYGEEPGGGVQHRSNKDRVASALNEFFSPGLQGPQRSSSYYFMDCMNS
TQLVTSWQSDWRKTESKTLEQAAGVEPGTQGQHIASPCFGAEVAGFQGKKGERDKQTQRH
TEGKAIRRRGSYWSYAARAKGCQKPTEAGGVKEGFSPRTLEGTVALLTLSGLQN

>gi568815595r:63910671_64123419|GENSCAN_predicted_CDS_6|525_bp
atgaggcagctggcagtgggagtggaagctaagagaatgtatggggaggaaccaggaggt
ggagtccagcacaggagcaacaaggaccgtgttgcttctgccctgaatgagttcttttct
cccgggctgcagggaccacagaggtcttcttcctattacttcatggactgtatgaattcc
acccagctggtgacatcatggcagtcggattggaggaagacagagagcaagacgttggaa
caagcagcaggggtggagcctgggacacaaggtcagcacatagcaagcccttgctttgga
gcagaggtggccggtttccagggcaagaaaggagagagagacaaacagacccagagacac
acagaggggaaggccatcagaagacgaggcagctattggagttacgcagccagagccaag
ggatgccagaagccaacagaagctggaggagtcaaggaaggattctcccctagaaccctg
gaagggactgtggccctgctgacgctttctgggctccaaaactga

>gi568815595r:63910671_64123419|GENSCAN_predicted_peptide_7|356_aa
MRKSALKVTDKYGVKDRTELPLGYGQAAGGGQDLLEQRSSVGGDFALQGHLALFGDISGL
SQPEGCLSADGGAKRQEHLSRFSMPDLSKDSGMNVSEKLSNMGTLNSSMQFRSAESVRSL
LSAQQYQEMEGNLHQLSNPIGYRDLQSHGRMHQSFDFDGGMAGSKLPGQEGVRIQPMSER
TRRRATSRDDNRRFRPHRSRRSRRSRSDNALHLASEREAISRLKDRPPLRAREDYDQFMR
QRSFQESMGHGSRRDLYGQCPRTVSDLALQNAFGDRWGPYFAEYDWCSTCSSSSESDNEG
YFLGEPIPQPARLRYVTSDELLHKYSSYGLPKSSTLGGRGQLHSRKRQKSKNCIIS

>gi568815595r:63910671_64123419|GENSCAN_predicted_CDS_7|1071_bp
atgcgtaaaagtgctttaaaagtgacagataaatatggagtaaaggacagaacagagctc
cccttgggctatggtcaagcagcaggtggaggacaggatctgttagagcagcggtcctca
gttgggggcgattttgccctccagggacatttggcactgtttggagacatttcggggctg
tcacaaccagagggatgcctctctgctgatggtggtgccaagcgccaggagcacctatcc
cgattttccatgcctgacctcagcaaagactctggaatgaatgtgtctgagaagctgagc
aacatgggcactcttaactcgtccatgcagttccggagcgcagagtcagttcgcagcctg
ctctctgcccagcagtaccaggagatggagggaaacctccaccagctcagcaaccccatt
ggctacagagacctgcagtcccacggaaggatgcatcagagctttgattttgatggaggg
atggcgggcagcaagctgccagggcaggagggcgtgaggatccagcccatgagtgaacgc
acccggagaagagctacttcacgcgacgacaaccgccgtttccgacctcacaggtccagg
cgttcccgacgctctcgctccgacaacgccctccacctggccagcgaacgcgaggccatc
tcccggttaaaagataggccccctctgagagccagggaggactatgaccaatttatgcgc
cagcggagcttccaggagagcatggggcatgggtcccggagggacctgtacggccagtgc
cctaggactgtgtcggacctggctttgcagaatgcctttggggaccgctggggaccctac
ttcgccgagtatgattggtgttccacctgctcctcctcttcagagtctgacaacgagggc
tatttcctaggagaacccatcccccagccagcgcgcctgcgatacgtcacaagcgatgag
ctgctgcacaaatacagctcctacggcctccccaaatcttccacattaggtggcagagga
cagttgcacagcaggaaaagacagaagagcaaaaactgtatcatttcttaa