GENSCAN 1.0	Date run:  4-Nov-116	Time: 00:28:09

Sequence gi568815596f:75546808_75755282 : 208475 bp : 40.00% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -    288    283    6                               1.05
 1.12 Term -   2050   1952   99  1  0   33   49   109 0.514  -1.35
 1.11 Intr -   2961   2796  166  2  1   -1   79    96 0.126  -1.16
 1.10 Intr -   6814   6609  206  1  2   39   98   148 0.579   7.98
 1.09 Intr -   7370   7206  165  2  0   92   53    84 0.732   4.54
 1.08 Intr -   7625   7505  121  1  1  127   81   -25 0.359   0.28
 1.07 Intr -  13491  13232  260  0  2   38   74   120 0.413   0.94
 1.06 Intr -  13910  13726  185  0  2   56   41   151 0.709   5.79
 1.05 Intr -  14112  14007  106  0  1   74   69    72 0.665   2.77
 1.04 Intr -  19658  19583   76  1  1   62   98    42 0.235   1.20
 1.03 Intr -  23192  23065  128  2  2   24   75    84 0.346  -0.74
 1.02 Intr -  24343  24137  207  1  0  101   84   140 0.705  13.25
 1.01 Init -  33207  33085  123  0  0   94   59    43 0.307   2.22
 1.00 Prom -  44288  44249   40                              -3.75

 2.09 PlyA -  45682  45677    6                               1.05
 2.08 Term -  51015  50751  265  2  1   67   39   266 0.787  13.60
 2.07 Intr -  51817  51556  262  2  1   64   -3   216 0.356   5.72
 2.06 Intr -  52271  52129  143  1  2    4   72    64 0.244  -4.52
 2.05 Intr -  53942  53602  341  2  2  116   62   205 0.538  14.05
 2.04 Intr -  62041  61915  127  0  1  143   89     6 0.004   5.96
 2.03 Intr -  62574  62393  182  0  2   22    2   217 0.001   4.24
 2.02 Intr -  68872  68685  188  2  2   56   44    98 0.001   0.69
 2.01 Init -  74757  74685   73  0  1  100   82    71 0.182   8.98
 2.00 Prom -  82419  82380   40                              -6.55

 3.00 Prom +  86335  86374   40                              -5.45
 3.01 Init + 100001 100103  103  1  1   91   92    96 0.699   9.70
 3.02 Intr + 100295 100412  118  0  1  121   94   358 0.977  38.30
 3.03 Intr + 105335 105453  119  2  2  109   57    54 0.998   3.59
 3.04 Intr + 105716 105850  135  0  0   70  115   153 0.949  15.82
 3.05 Intr + 107929 108110  182  2  2   72   64   226 0.945  17.27
 3.06 Term + 108257 108478  222  1  0   83   37   197 0.986  10.03
 3.07 PlyA + 108620 108625    6                               1.05

 4.00 Prom + 133242 133281   40                              -5.45
 4.01 Init + 135676 135903  228  0  0   88   57   211 0.436  16.42
 4.02 Term + 136609 136752  144  0  0   46   39   195 0.458   7.33
 4.03 PlyA + 136849 136854    6                               1.05

 5.14 PlyA - 137960 137955    6                               1.05
 5.13 Term - 141170 141006  165  2  0   29   37   145 0.667   0.43
 5.12 Intr - 142418 142219  200  0  2   80   63   105 0.907   5.35
 5.11 Intr - 143274 143162  113  2  2   26   86    98 0.971   2.50
 5.10 Intr - 143912 143831   82  0  1   49   77   106 0.948   3.38
 5.09 Intr - 145293 145170  124  0  1   55   37    79 0.855  -1.26
 5.08 Intr - 147620 147434  187  1  1   66   83   114 0.979   7.47
 5.07 Intr - 149508 149393  116  0  2   90   71    69 0.975   3.73
 5.06 Intr - 154480 154383   98  2  2   59   74    95 0.975   4.01
 5.05 Intr - 155616 155473  144  1  0   87   44   166 0.416  11.43
 5.04 Intr - 159844 159716  129  2  0   31   92   121 0.801   6.55
 5.03 Intr - 164037 163453  585  1  0   30  -40   494 0.803  22.49
 5.02 Intr - 165235 164960  276  2  0   69   68   307 0.974  23.37
 5.01 Init - 166028 165926  103  2  1   60   68   120 0.649   5.66
 5.00 Prom - 185402 185363   40                              -4.75

 6.03 PlyA - 185546 185541    6                               1.05
 6.02 Term - 187117 186924  194  2  2   21   40   166 0.107   1.70
 6.01 Init - 192321 192249   73  0  1   77   87    49 0.416   5.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  62388  62534  147  1  0   55  109   154 0.917  13.49
S.002 Init -  90814  90752   63  1  0   54   66    79 0.868   3.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:75546808_75755282|GENSCAN_predicted_peptide_1|613_aa
MSTARLLPTFTQGPRALQSACGKCCQPGSLPSEQEAPLWLRDLAATQLMTCNFYLPPPPN
HAFSFLTGWAKIKEIKIIHEKKWVSAAAANTLRQQPKSAAQVSSSNKLGHVECANLRQRD
EQEPIDLTGLGYGRRNRVQSSTVKMCHRCPGLRGLSSMKSSFERLTCAPGILSYSFVQLL
RGLAPPSVSTQAGTPHPQASPDPGGPSAGIPFRAQSPEVRAGAPAKVRGARERSLNSGGA
RHPQRAPASPKRPLFGNTQSTSDLKQLLCSQVPAQPARGGPARNVRAAPWTIYLVCFGGS
QLAARIWRPPGPRKPSASGSERLLAPPKVPVGRFAFGEGRADSPRCSIWEVCVGVPTPTI
EGLASEAVPGGSEMLFVLGFKNSLPPLAPSLITKAACTLPSMMGLVVAAGSRLQGILFLQ
GDFDQKGCLKLSFSGHLHKHTHLVKTRQAIAAHGRRRRQLGGLGVSAQLKLPTLIDTFMC
QAQFQALETGMNKILFVPKELSNPVWRQMRKSEIVMQCFAVHLSLQPHGKWPWGIFLSPH
KAAAQLNYLFDLEPSGIRKSKQYIIQESHFQLEGSLEDSLKLLRDGHSRSKYTDKIHDDY
KLVTAILDKNRVL

>gi568815596f:75546808_75755282|GENSCAN_predicted_CDS_1|1842_bp
atgagtactgccagactactgccaacgttcactcaaggcccaagggctcttcagtcagct
tgtggtaaatgctgccagcctgggtctctcccctcagagcaggaggctcctctgtggctc
agggatttagctgccactcagctcatgacctgtaacttctatctcccgccccctcccaac
cacgctttcagttttctcacaggctgggcaaaaattaaagagattaaaatcatccatgag
aaaaagtgggttagtgcagctgctgcaaataccctgcgtcagcagcccaagtcagcagct
caagtcagcagctcaaataaacttggccatgtggagtgtgcaaacctgagacagagagat
gaacaagaacctattgacctcacaggactcggatatgggagacgtaacagggtgcagagc
tctacagtgaaaatgtgtcacagatgcccaggactcagaggtcttagttccatgaaaagt
tcttttgaacgactgacgtgtgctcctggcatcctctcatattcctttgtacagcttctg
cggggcttggcgccgccgtccgtgagcacccaggccgggaccccacatccccaggccagc
cctgaccccggcggcccctccgccgggattcctttccgagcgcagtccccggaagtgcgc
gccggggccccagcaaaggtaagaggtgcccgagagcgctccctgaactctgggggcgcc
cggcatccccagcgggctccggcttctccgaagcgccctcttttcggaaacacccagagc
acttctgacctgaagcagctgctttgttcccaagtccctgcccagcctgcgcggggcgga
cctgccagaaatgtacgtgctgcaccgtggactatttacctggtttgtttcggaggcagc
caactcgccgcgcgcatttggcgacccccaggaccccgaaagccgagtgcatcagggagt
gaaaggctgttggcgccccctaaagtcccagtgggacgctttgcttttggagaggggcgc
gcagacagtccacgctgctctatctgggaggtctgcgtgggggtccccacccctactatt
gagggcctggcatctgaggctgtgcctgggggcagtgagatgctctttgttctggggttc
aaaaactctcttcctcctcttgccccctctttgatcaccaaggcagcctgcactttgccc
tccatgatggggctggtggtagctgcagggagcagacttcaggggatcttgtttctgcaa
ggggactttgatcaaaagggctgcctaaagctgtctttctctgggcacctccacaaacac
actcatcttgtcaagacaagacaggccatagcagcccatgggaggagacggagacagctt
ggtggccttggtgtgtctgctcagctcaagctgccaacacttattgacaccttcatgtgc
caggcacagttccaggctctggaaacagggatgaacaagatactctttgtgcccaaggag
ctcagcaatccagtgtggagacagatgaggaaatcagagatagtaatgcaatgttttgct
gtccatctctcattacagccacacgggaaatggccttggggtatttttctttccccacac
aaagcagcagctcagctgaattatttgtttgatcttgagccttcaggtatcaggaaaagt
aaacagtacatcattcaagagtcacatttccagcttgaaggttccctggaggacagcttg
aagttattacgggatgggcattcaagaagtaaatacacagataaaatacatgatgattat
aaactggtaactgctatcctggacaagaacagggtgctctag

>gi568815596f:75546808_75755282|GENSCAN_predicted_peptide_2|526_aa
MKNLGSLGGALDFTWHHVEAEPLESNSPEQGQEEETCGVDSRLDVHICPSCEDHYVSTLF
FAAQNICLILTATPGMGAFMPFLMMRPQVVIRKPASPRDSPVLEGPGVCENRDALSAAAR
RRHTVAPLDGPTVFHKAAFVRIPAQPPRLAPLMEARLVFPLVYKPKKLALFLPGKGTTDL
IFKSFASTPLQALVRPAATSQSQQGYYKMLGPAASLNSALQYSIDKANKASLFVLRMSSE
MSWQFCSNTEELHFSASLNYSCMSIQVLSTEYTSSPSYPIPPTLRQSVKPAFKYQRKLQI
LSRRLSGSRAHSLNPFIPLASCVDLFLKSPPLVTRFAYELLPMRKGKNDVEGEKPEAHRS
EQGLWWIKNDSELAQVHRAALHGGRPVGVSVGLEDLGLIIGRQGWGWLLLRGTAALERWL
VVGGQRVGILVGFAEGGRGPYGTSGFHFLLWESGLSEPKCHTARKLQQPQRHMWEGVRVP
GQQPLPTVSILELTRKWILQLHSRLPCWKYMEQEQPSAQSSPQNAD

>gi568815596f:75546808_75755282|GENSCAN_predicted_CDS_2|1581_bp
atgaagaatcttgggagtcttggaggggcactggacttcacatggcatcatgtagaagca
gaacctttggaatcaaatagcccagagcaggggcaggaagaagaaacctgtggtgtggac
tccaggcttgatgttcacatctgcccttcctgtgaggaccactatgtctctacactgttc
tttgctgcacaaaacatttgtttaatccttacagctactcctggaatgggcgcatttatg
ccctttttaatgatgaggccacaagtagtgatcagaaaaccagcatctcctcgagactca
cctgtcttagaaggtccaggtgtgtgtgagaaccgggatgcgctgtctgccgctgcccgg
cgccgccacacggtggcgccgttggacggtcccacagtcttccacaaagcggcttttgtc
cgtatccccgcacagccgccgaggttagcacccctcatggaagccaggctggttttccct
ctggtctacaagccaaagaagctggcgctattcttaccaggaaaggggactacagattta
atttttaaatcttttgcaagcacccctcttcaagcactggtgagacctgcagccacctct
cagagtcagcagggctattacaagatgttggggccagccgcctccttaaactcagcacta
cagtacagcattgataaagcaaacaaggcaagcttgtttgtacttcgtatgtcttcagaa
atgagctggcagttttgtagtaacactgaggaattacactttagtgcatcactgaactat
tcctgcatgtccatacaagtgttgtccacagagtacacatcttccccgtcctatcccata
cccccaaccctaagacagtctgtcaagccagctttcaagtatcagagaaagctgcagatt
ctatctagaagattgtctggatctagagcccactcattgaaccctttcattccacttgcg
agctgtgttgatctctttttgaaatctcctccactggttacacgttttgcttatgagtta
ttgcccatgagaaagggcaagaatgatgtggaaggtgagaagcctgaggcccacaggtca
gagcaaggattatggtggattaaaaatgacagcgaattggcccaggtacacagggctgcc
ctacatggtgggcgtcctgtaggcgtctcagttggcttggaggacctggggcttataatt
gggcgccagggttgggggtggctgcttctgcggggcaccgcagccttggagaggtggctg
gtagttggagggcagcgagtaggcattctggtgggctttgcggaaggagggcgggggcct
tacgggaccagcggcttccacttcctgctctgggaatctggactctcggaacccaaatgc
catactgcgaggaagcttcagcagccccagagacacatgtgggaaggagttagggtccct
ggtcagcagcctctgccgacagtcagcattttggagctaactaggaagtggatcctccag
ctccattcaagacttccttgttggaaatacatggaacaagaacagccgtctgctcagagt
tctccccaaaatgcagattaa

>gi568815596f:75546808_75755282|GENSCAN_predicted_peptide_3|292_aa
MAACIAAGHWAAMGLGRSFQAARTLLPPPASIACRVHAGPVRQQSTGPSEPGAFQPPPKP
VIVDKHRPVEPERRFLSPEFIPRRGRTDPLKFQIERKDMLERRKVLHIPEFYVGSILRVT
TADPYASGKISQFLGICIQRSGRGLGATFILRNVIEGQGVEICFELYNPRVQEIQVVKLE
KRLDDSLLYLRDALPEYSTFDVNMKPVVQEPNQKVPVNELKVKMKPKPWSKRWERPNFNI
KGIRFDLCLTEQQMKEAQKWNQPWLEFDMMREYDTSKIEAAIWKEIEASKRS

>gi568815596f:75546808_75755282|GENSCAN_predicted_CDS_3|879_bp
atggcggcctgcattgcagcggggcactgggctgcaatgggcctaggccggagtttccaa
gccgccaggactctgctccccccgccggcctctatcgcctgcagggtccacgcggggcct
gtccggcagcagagcactgggccttccgagcccggtgcgttccaaccgccgccgaaaccg
gtcatcgtggacaagcaccgccccgtggaaccggaacgcaggttcttgagtcctgaattc
attcctcgaaggggaagaacagatcctctgaaatttcaaatagaaagaaaagatatgtta
gaaaggagaaaagtactccacattccagagttctatgttggaagtattcttcgtgttact
acagctgacccatatgccagtggaaaaatcagccagtttctggggatttgcattcagaga
tcaggaagaggacttggagctactttcatccttaggaatgttatcgaaggacaaggtgtc
gagatttgctttgaactttataatcctcgggtccaggagattcaggtggtcaaattagag
aaacggctggatgatagcttgctatacttacgagatgcccttcctgaatatagcactttt
gatgtgaatatgaagccagtagtacaagagcctaaccaaaaagttcctgttaatgagctg
aaagtaaaaatgaagcctaagccctggtctaaacgctgggaacgtccaaattttaatatt
aaaggaatcagatttgatctttgtttaactgaacagcaaatgaaagaagctcagaagtgg
aatcagccatggcttgaatttgatatgatgagggaatatgatacttcaaaaattgaagct
gcaatatggaaggaaattgaagcgtcgaaaaggtcttga

>gi568815596f:75546808_75755282|GENSCAN_predicted_peptide_4|123_aa
MGRNQCKKAENSKNQNARSSKNHNSSPAREQNRMENEFDEVTEVGFRRWVITNSSELKEH
VLTQWKEAKNLEKRLEACLTRAPEGSAKHGKVQLVPDAAKTYRIVKTINAMKKLRQLMSK
MTS

>gi568815596f:75546808_75755282|GENSCAN_predicted_CDS_4|372_bp
atggggagaaaccagtgcaaaaaggctgaaaattccaaaaaccagaatgcccgttcttca
aagaatcacaactcatcaccagcaagggaacaaaaccggatggagaatgagtttgacgaa
gtgacagaagtaggcttcagaaggtgggtaataacaaactcctctgagctaaaggagcat
gttctaacccaatggaaggaagctaagaaccttgaaaaaaggttagaggcctgccttaca
agagctcctgaaggaagcgctaaacatggaaaggtacaactggtaccagacgctgcaaaa
acataccgaattgtaaagaccatcaacgctatgaagaaactgcgtcaactaatgagcaaa
atgaccagctag

>gi568815596f:75546808_75755282|GENSCAN_predicted_peptide_5|773_aa
MKLRTLAVSVTALKVARLGSAPSDVQMCLEFLPSDSGAQLASPSGSRTGAAGGAACQSGA
VRSYSSALGWSMGLGAVEQGVVLVGDARAAQEPMEWMGGSGMAGCRSRALHRGKAAKARR
EIEHSAGRKGLFGSARLIPATAMAPRSRLLSLGRRGNFRSRVLRRKSRPLEEAARRWRDC
PTGFGALVAGAGSGRAPGVPPKRLPARTKAQVSRETRGSGEVTAQGGKGPRGLWILLWGF
YNLLPTTSHAESYPERLIQKVVSEKIARALARYLHLPFGLLGGNKTIVYSWEALRFHHQL
TPSVITNTVIKVYEEPKLSQQKSRTLDVSTDEEDKIHHSSESKDDQGLSSDSSSSLGEKE
LSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPEISRNEETS
EESQEDEKQDTWEQQQMRKAVKIIEERDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQ
LNTRLTLLQETHRSHLREYEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLI
DCLNEKIINIQEIESSMHALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNFSV
DEKTQWILEEIESRRTKRRQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDILQKQK
KVFEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKL
ESTGLKEMPWFKSVEEFMDSSVEDSKKESSSDKKVLSAIINKTIIPRLTGTAS

>gi568815596f:75546808_75755282|GENSCAN_predicted_CDS_5|2322_bp
atgaagctgcggaccctcgcggtgagcgttacagctcttaaggtggcgcgtctggggtct
gccccttctgatgttcagatgtgtttggagtttcttccttctgactcaggagcccaactg
gcttcacctagtggatcccgcaccggggctgcaggtggagctgcctgccagtccggcgcc
gtgcgctcgtactcctcagcccttgggtggtcgatgggactgggcgccgtggagcagggg
gtggtgctcgtcggggatgctcgggcagcacaggagcccatggagtggatgggaggctca
ggcatggcgggctgcaggtcccgagccctgcaccgcgggaaggcagctaaggcccggcga
gaaatcgagcacagcgccggccgaaaaggacttttcggcagcgcgcggctgattccagcg
acagcgatggcgccgaggagtcgcctgctgagcctggggcgccgagggaacttccggtcc
cgggttctgcggaggaagagccgccctctggaggaggccgcgcgcaggtggcgggactgc
cccaccgggttcggggccctcgtggccggggccgggtctgggcgagctcccggcgtgcca
ccaaagcggctccccgcgcggacgaaggctcaggtgtccagggagacgcggggaagcggg
gaggtgacggcacagggcgggaaggggccgcggggtctctggatccttctctgggggttc
tataacttgctgccgaccacaagccatgctgagtcttatccagaaagacttatccagaag
gtagtgagcgagaaaatagctcgagcacttgcccgctatctgcatctgccttttggactc
cttgggggaaataaaacaatcgtgtacagttgggaggctcttcgttttcaccatcagttg
actccatcagttataactaacacagttatcaaagtttatgaagaacctaaactgtcacaa
caaaaatccagaacccttgatgtgtccacagatgaagaggataaaatacatcactcctca
gaaagtaaggatgatcagggtttgtcttctgacagttctagctctcttggagaaaaagaa
ctttcatcaacagttaagatcccagatgcagcttttattcaggcagcccgcagaaaacgt
gaattggccagggcccaagatgactatatttctttggatgtacaacatacctcctccatc
tctggtatgaagagagagagcgaagatgaccctgagataagcagaaatgaagaaacaagt
gaagaaagtcaggaagatgaaaagcaagatacttgggaacaacagcaaatgaggaaagca
gttaaaatcatagaggaaagagacatagatctttcctgtggcaatggatcttcaaaagtg
aagaaatttgatacttccatttcatttccgccagtaaatttagaaattataaagaagcaa
ttaaatactagattaacattactacaggaaactcaccgctcacacctgagggagtatgaa
aaatacgtacaagatgtcaaaagctcaaagagtaccatccagaacctagagagttcatca
aatcaagctctaaattgtaaattctataaaagcatgaaaatttatgtggaaaatttaatt
gactgccttaatgaaaagattatcaacatccaagaaatagaatcatccatgcatgcactc
cttttaaaacaagctatgacctttatgaaacgcaggcaagatgaattaaaacatgaatca
acgtatttacaacagttatcacgcaaagatgagacatccacaagtggaaacttctcagta
gatgaaaaaactcagtggattttagaagagattgaatctcgaaggacaaaaagaagacaa
gcaagggtgctttctgggaattgtaaccatcaggaaggaacatctagtgatgatgaactg
ccttcagcagagatgattgacttccaaaaaagccaaggtgacattttacagaaacagaag
aaagtttttgaagaagtgcaagatgatttttgtaacatccagaatattttgttgaaattt
cagcaatggcgagaaaagtttcctgactcctattatgaagctttcattagtttatgcata
ccaaagcttttaaatcccctaatacgagttcagttgattgattggaatcctcttaagttg
gaatccacaggtttaaaagagatgccatggttcaaatctgtagaagaatttatggatagc
agtgtggaagattcaaagaaggaaagtagttcagataaaaaagtcttgtctgcaatcatc
aacaaaacaattattccccgacttacaggtactgcttcgtaa

>gi568815596f:75546808_75755282|GENSCAN_predicted_peptide_6|88_aa
MQALAVPPTREHVCWRWLFYRSDAGSNVQLGPWLQRVEAPSLGIFHMPGCPGKSLLQGQG
LMENLCYGNAEGKCGVGAPTQSPYWGTA

>gi568815596f:75546808_75755282|GENSCAN_predicted_CDS_6|267_bp
atgcaggctctggctgttccaccaacccgggagcatgtctgctggaggtggctgttttac
aggtcagatgcagggtccaatgtacagcttgggccatggctccagagggtggaagcccca
agccttggcatcttccacatgcctggatgcccaggcaaaagtttgctgcaggggcagggc
ctcatggagaacctctgctacggcaatgcagaagggaaatgtggggtgggagcccccaca
cagagtccctactggggcactgcctag