GENSCAN 1.0	Date run:  4-Nov-116	Time: 00:09:29

Sequence gi568815595f:141160176_141393202 : 233027 bp : 43.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1262   1301   40                              -1.46
 1.01 Init +   9222   9277   56  2  2   66  103    14 0.164   1.46
 1.02 Term +  18043  18154  112  1  1   59   38   124 0.295   2.53
 1.03 PlyA +  18686  18691    6                               1.05

 2.00 Prom +  39304  39343   40                              -1.46
 2.01 Init +  41196  41252   57  2  0   83   80    52 0.480   3.79
 2.02 Term +  47255  47326   72  1  0   71   35    75 0.084  -1.59
 2.03 PlyA +  52309  52314    6                               1.05

 3.00 Prom +  63704  63743   40                              -0.66
 3.01 Init +  71730  71736    7  2  1  103  101     6 0.662   4.15
 3.02 Intr +  72158  72260  103  0  1  103  110    21 0.747   5.03
 3.03 Term +  78148  78286  139  1  1   97   53    85 0.486   3.34
 3.04 PlyA +  79760  79765    6                               1.05

 4.00 Prom +  88327  88366   40                              -4.56
 4.01 Init + 100001 100079   79  1  1   36   65   235 0.753  15.28
 4.02 Intr + 104409 104480   72  1  0   30  110    50 0.317   0.78
 4.03 Intr + 114107 114154   48  0  0   77   81    69 0.682   3.75
 4.04 Intr + 118167 118325  159  1  0   78  102   170 0.899  17.36
 4.05 Intr + 119203 119329  127  2  1   89   99    54 0.972   6.34
 4.06 Intr + 127139 127278  140  2  2  122   91   -12 0.694   2.61
 4.07 Term + 132093 133030  938  1  2   66   42   525 0.856  37.98
 4.08 PlyA + 133454 133459    6                               1.05

 5.04 PlyA - 134532 134527    6                               1.05
 5.03 Term - 137097 136628  470  1  2  -30   50   272 0.442   6.74
 5.02 Intr - 138316 137691  626  0  2  -18   81   397 0.393  20.29
 5.01 Init - 140199 139502  698  0  2   81   41   334 0.329  22.49
 5.00 Prom - 141538 141499   40                              -1.86

 6.03 PlyA - 141693 141688    6                               1.05
 6.02 Term - 151392 151148  245  1  2   26   46   145 0.036   0.16
 6.01 Init - 159611 159476  136  2  1   53   57   143 0.084   8.00
 6.00 Prom - 161228 161189   40                              -4.36

 7.00 Prom + 179295 179334   40                              -2.56
 7.01 Init + 185152 185233   82  0  1   70   99    45 0.706   4.93
 7.02 Intr + 192625 192732  108  2  0   24   87    81 0.367   1.86
 7.03 Intr + 193649 193865  217  0  1   67   88    74 0.546   2.86
 7.04 Intr + 221250 221312   63  0  0   94   91    47 0.668   3.43
 7.05 Term + 223595 223694  100  2  1  100   32   106 0.730   3.80
 7.06 PlyA + 223980 223985    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:141160176_141393202|GENSCAN_predicted_peptide_1|55_aa
MLKAKTGKNLGLFHQIAKCSPSIIHNSSQLCVRPRNPGGDDDDNDDDDNSNTNIY

>gi568815595f:141160176_141393202|GENSCAN_predicted_CDS_1|168_bp
atgctaaaagccaagacaggcaaaaatctaggcctttttcaccaaatagccaagtgctca
ccttcaattatccacaactcaagtcaactatgtgtcagaccaagaaatccagggggagat
gatgacgacaatgatgatgatgataacagcaatactaatatctattaa

>gi568815595f:141160176_141393202|GENSCAN_predicted_peptide_2|42_aa
MMQGLIPDLLSIRITWETQQLKTDAARSPRKLPRPSRTLSFG

>gi568815595f:141160176_141393202|GENSCAN_predicted_CDS_2|129_bp
atgatgcaggggctgatcccagacctgctgagcatcaggattacctgggagacccagcaa
ctgaagactgacgctgcccgatcacctcggaagctccctagaccatcacggacgctgagc
ttcgggtaa

>gi568815595f:141160176_141393202|GENSCAN_predicted_peptide_3|82_aa
MGALSRTAPALPPLDSSRDSSSRDPPSRAVLSRLVSREAPAWQPARLAPAITELARPPAM
GCRPENPSVIAASGTRVLLCLV

>gi568815595f:141160176_141393202|GENSCAN_predicted_CDS_3|249_bp
atgggcgccctctcccgcacggcccccgcactcccgccgctggattccagccgagattca
agctcccgggatcccccttcccgggcggtcctgagccggctagtctccagagaggctcca
gcatggcagcctgcccgactagcacctgccatcacggagctggcacggcctccagcaatg
ggctgtcgaccagaaaatccttctgtgattgctgcttcaggaactcgagtgcttctctgc
ctcgtttga

>gi568815595f:141160176_141393202|GENSCAN_predicted_peptide_4|520_aa
MLFRNRFLLLLALAALLAFVSLSLQFWSSLSSGEESQADTLEYQVLCAGTGPFPAFLLEP
GLHIDPVHLIPVSTPKNGMSSKSRKRIMPDPVTEPPVTDPVYEALLYCNIPSVAERSMEG
HAPHHFKLVSVHVFIRHGDRYPLYVIPKTKRPEIDCTLVANRKPYHPKLEAFISHMSKGS
GASFESPLNSLPLYPNHPLCEMGELTQTGVVQHLQNGQLLRDIYLKKHKLLPNDWSADQL
YLETTGKSRTLQSGLALLYGFLPDFDWKKIYFRHQPSALFCSGSCYCPVRNQYLEKEQRR
QYLLRLKNSQLEKTYGEMAKIVDVPTKQLRAANPIDSMLCHFCHNVSFPCTRNGCVDMEH
FKVIKTHQIEDERERREKKLYFGYSLLGAHPILNQTIGRMQRATEGRKEELFALYSAHDV
TLSPVLSALGLSEARFPRFAARLIFELWQDREKPSEHSVRILYNGVDVTFHTSFCQDHHK
RSPKPMCPLENLVRFVKRDMFVALGGSGTNYYDACHREGF

>gi568815595f:141160176_141393202|GENSCAN_predicted_CDS_4|1563_bp
atgcttttccgcaaccgcttcttgctgctgctggccctggctgcgctgctggcctttgtg
agcctcagcctgcagttctggagctctttgtccagtggagaagaatcacaagccgacacc
ctggaataccaggtgctgtgtgctgggacaggccccttcccagccttcctcctggagccc
ggcctgcacatcgaccctgtccacctgatcccggtgtcgactcctaagaatggaatgagt
agcaagagtcgaaagagaatcatgcccgaccctgtgacggagccccctgtgacagacccc
gtttatgaagctcttttgtactgcaacatccccagcgtggccgagcgcagcatggaaggt
catgccccgcatcattttaagctggtctcagtgcatgtgttcattcgccacggagacagg
tacccactgtatgtcattcccaaaacaaagcgaccagaaattgactgcactctggtggct
aacaggaaaccgtatcacccaaaactggaagctttcattagtcacatgtcaaaaggatcc
ggagcctctttcgaaagccccttgaactccttgcctctttacccaaatcacccattgtgt
gagatgggagagctcacacagacaggagttgtgcagcatttgcagaacggtcagctgctg
agggatatctatctaaagaaacacaaactcctgcccaatgattggtctgcagaccagctc
tatttagagaccactgggaaaagccggaccctacaaagtgggctggccttgctttatggc
tttctcccagattttgactggaagaagatttatttcaggcaccagccaagtgcgctgttc
tgctctggaagctgctattgcccggtaagaaaccagtatctggaaaaggagcagcgtcgt
cagtacctcctacgtttgaaaaacagccagctggagaagacctacggggagatggccaag
atcgtggatgtccccaccaagcagcttagagctgccaaccccatagactccatgctctgc
cacttctgccacaatgtcagctttccctgtaccagaaatggctgtgttgacatggagcac
ttcaaggtaattaagacccatcagatcgaggatgaaagggaaagacgggagaagaaattg
tacttcgggtattctctcctgggtgcccaccccatcctgaaccaaaccatcggccggatg
cagcgtgccaccgagggcaggaaagaagagctctttgccctctactctgctcatgatgtc
actctgtcaccagttctcagtgccttgggcctttcagaagccaggttcccaaggtttgca
gccaggttgatctttgagctttggcaagacagagaaaagcccagtgaacattccgtccgg
attctttacaatggcgtcgatgtcacattccacacctctttctgccaagaccaccacaag
cgttctcccaagcccatgtgcccgcttgaaaacttggtccgctttgtgaaaagggacatg
tttgtagccctgggtggcagtggtacaaattattatgatgcatgtcacagggaaggattc
taa

>gi568815595f:141160176_141393202|GENSCAN_predicted_peptide_5|597_aa
MARELCDERTSFSSRFDQWEERVSVIEDQMNEMKPEEKFREKRVKRNKQTLQEIWDYVKR
PNLHLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIRIQEIHRTPQRYSSRRATPR
HITVRFTKVEMKEKMLRAAREKGRVTHKGKPIRLTADLSAETLQARREWGPIFNILKEKN
FQSRISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALKELLKEALNMERNNWRWFFEKI
NKIDSPLARLIKKKREKNQIDAIKNDEGDITTNPTEIQITIREYYKHLYANKLENLEEMD
KFLDTYTLPRLNQEEVESLNRPITGSEIEVIINSIPTKKSPGPDGFTAEFYRRYKEELVP
FLLKLFQSIEKEGILPNSFYEASIILIPKPDRDTTKKENFRPTSLMNTDAKILNKILANR
IQQHIKKLIHHDQVDFIPGMQGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIG
RINIVKMAILSEVIYRFNTIPIKLPMTFFTELEKTTLKFIRNQKRALIAKSILSQKNKAG
GITLPDFKLYYKATVTETAWYWYQNRDIDQWNRTEPSEIIPHIYNHLIFGKPDKNKN

>gi568815595f:141160176_141393202|GENSCAN_predicted_CDS_5|1794_bp
atggcacgagaactatgtgatgaacgcacaagcttcagtagccgattcgatcaatgggaa
gaaagggtatcagtgattgaagatcaaatgaatgaaatgaagccagaagagaagtttaga
gaaaaaagagtaaaaagaaacaaacaaaccctccaagaaatatgggactatgtgaaaaga
ccaaatctacatctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaa
aacactctgcaggatattatccaggagaacttccccaacctagcaaggcaggccaacatt
cgaattcaggaaatacacagaacaccacaaagatactcctcgagaagagcaactccaaga
cacataactgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccaga
gagaaaggtcgggttacccacaaagggaagcccatcagactaacagctgatctctcagca
gaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaat
tttcaatccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaa
tcctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagag
ctgctgaaggaagcactaaacatggaaaggaacaactggaggtggttttttgaaaagatc
aacaaaattgatagtccactagcaagactaataaagaagaaaagagagaagaatcaaata
gatgcaataaaaaatgatgaaggggatatcaccaccaatcccacagaaatacaaattacc
atcagagaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatggac
aaattcctggacacatacaccctcccaagactaaaccaggaagaagttgaatctctgaat
agaccaataacaggctctgaaattgaggtaataattaatagcataccaaccaaaaaaagt
ccaggaccagatggattcacagctgaattctaccggaggtacaaggaggagctggtacca
ttccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttat
gaggccagcatcatcctgataccaaagcctgacagagacaccacaaaaaaagagaatttt
agaccaacatccctgatgaacactgatgcaaaaatcctcaataaaatactggcaaaccga
atccagcagcacatcaaaaagcttatccaccatgatcaagtggacttcattcctgggatg
caaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaacgaaataaaagaggacacaaacaaatggaagaacattccatgctcatggatagga
agaatcaatattgtgaaaatggccatactgtccgaagtaatttacagattcaataccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcata
cggaaccaaaaaagagccctcattgccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacgctacctgacttcaaactatactacaaggctacagtaaccgaaacagcatgg
tactggtaccaaaacagagatatagaccaatggaacagaacagagccctcagaaataata
ccacacatctacaaccatctgatctttggcaaacctgacaaaaacaagaactag

>gi568815595f:141160176_141393202|GENSCAN_predicted_peptide_6|126_aa
MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSKVRQQVVVSMMGTQGQ
RQRAPENEASKGEGVWDTSRLRGDAPKAGDLTTPESTLKEPSSQTEEMGSILRQWKAVVR
FRGDAL

>gi568815595f:141160176_141393202|GENSCAN_predicted_CDS_6|381_bp
atgtgggaaagtttggaacctcctagagacttgttgaatggctttgaccaaaatgctgat
aatgatatggacaatgaaatccaggctgaggtggtctcagatggagatgaggaacttgtt
gggaactggagcaaagttaggcagcaggtggtagtttccatgatggggacgcaggggcag
cgccaaagggccccagagaacgaggcatccaagggggaaggggtgtgggatacgagccga
ctgaggggagacgcgcccaaagccggggacctcactaccccagagtcgaccttgaaagag
ccctcgagtcagactgaggagatgggcagtatcctccgacaatggaaagccgttgttcgc
ttcaggggagacgcgctgtga

>gi568815595f:141160176_141393202|GENSCAN_predicted_peptide_7|189_aa
MEEQPQGYPWLWLQGPGQLMLDYMLGTAIKAISLITANSQASEPRYQACTDKGNLKTLDC
KIEDGDSFLEAILDSSSYLQEHSSCSSGKCGLAEQHDHQLTAAGIHKPPYEVNTWVSGLI
PKFLQLRPSWLDLLISSFLESNPSLVHKACCPIFANSLCLPDYFGFLVFDSSKWQKQAKM
FTVEKGFAF

>gi568815595f:141160176_141393202|GENSCAN_predicted_CDS_7|570_bp
atggaggagcaaccacagggctacccttggctatggctgcaagggcctggacagctgatg
ttggactacatgctgggaacagccataaaagccatatctctgatcacagcgaactcacag
gccagtgagcccagatatcaagcatgcacagacaaaggaaacctgaagacactcgactgc
aaaattgaagatggagacagcttcttggaagctatcctggactccagcagttatctccag
gaacactctagttgttcctccggcaagtgtggtcttgcagaacaacatgatcatcagcta
actgctgcaggaattcataagccaccttatgaagtcaacacttgggtatctggtcttatc
ccaaaatttcttcaactcaggccctcttggttggacttgttgatttcctctttcctggag
agtaaccccagtttggtccacaaggcttgctgcccaatctttgccaacagcctgtgcctg
ccagattatttcgggttcctcgtgtttgactcgtcaaagtggcagaaacaggctaaaatg
ttcactgtggaaaagggatttgccttttaa