GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:30:16

Sequence gi568815589f:33194418_33447114 : 252697 bp : 46.68% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   7936   8076  141  0  0   98   43    90 0.390   3.43
 1.02 PlyA +  12012  12017    6                               1.05

 2.03 PlyA -  13103  13098    6                               1.05
 2.02 Term -  17496  17396  101  1  2   62   44    96 0.531   0.89
 2.01 Init -  20817  20751   67  0  1   45   94    58 0.401   3.33
 2.00 Prom -  32489  32450   40                              -3.86

 3.00 Prom +  34470  34509   40                              -4.86
 3.01 Init +  45792  45852   61  2  1   90   84   137 0.716  13.05
 3.02 Intr +  50695  50735   41  2  2  113   91   -10 0.799  -0.26
 3.03 Intr +  52199  52311  113  1  2  131   95    57 0.927   9.88
 3.04 Term +  54009  54054   46  0  1   77   42    81 0.852  -0.92
 3.05 PlyA +  54128  54133    6                               1.05

 4.10 PlyA -  58074  58069    6                               1.05
 4.09 Term -  60891  60802   90  0  0   96   51   123 0.979   7.12
 4.08 Intr -  61510  61448   63  1  0   85  109    -1 0.583   0.61
 4.07 Intr -  62491  62384  108  1  0   95  119   131 0.998  17.38
 4.06 Intr -  64616  64503  114  2  0   64   93   117 0.999  10.44
 4.05 Intr -  66752  66670   83  0  2  105   94    51 0.992   6.76
 4.04 Intr -  68413  68285  129  2  0  105   98    74 0.999  10.77
 4.03 Intr -  68969  68820  150  0  0   53   86    44 0.613   0.83
 4.02 Intr -  70178  69807  372  0  0   44   79   354 0.257  25.13
 4.01 Init -  70723  70576  148  1  1   48   11   140 0.222   0.56
 4.00 Prom -  74160  74121   40                              -6.76

 5.00 Prom +  74710  74749   40                              -7.66
 5.01 Init +  76249  76299   51  0  0   78   30    75 0.425   1.86
 5.02 Intr +  76735  76806   72  0  0  102   78    96 0.972   9.60
 5.03 Intr +  82039  82147  109  0  1   46  111   165 0.939  14.46
 5.04 Intr +  83696  83887  192  0  0   66   61    98 0.568   4.36
 5.05 Intr +  95951  96104  154  0  1   79   21    88 0.208   0.33
 5.06 Intr + 100151 101010  860  2  2  106   97   371 0.638  30.80
 5.07 Intr + 148388 148437   50  0  2   39   81   104 0.368   3.20
 5.08 Intr + 149703 149771   69  2  0   40  109    85 0.526   5.18
 5.09 Intr + 158229 158302   74  2  2   62   96    45 0.656   0.90
 5.10 Intr + 159669 159770  102  0  0  106   91    96 0.842  10.99
 5.11 Intr + 169593 169691   99  0  0  111   91    46 0.981   6.43
 5.12 Intr + 170291 170357   67  2  1   86    9    87 0.485  -0.49
 5.13 Intr + 172212 172357  146  2  2   92   96   130 0.666  13.28
 5.14 Term + 175489 175561   73  1  1   97   48    43 0.492  -1.42
 5.15 PlyA + 177808 177813    6                              -0.45

 6.11 PlyA - 177948 177943    6                               1.05
 6.10 Term - 180550 180419  132  1  0   78   39    80 0.147   0.19
 6.09 Intr - 190873 190663  211  0  1  102   39   133 0.320   8.72
 6.08 Intr - 191449 191232  218  1  2   58   84   376 0.988  31.50
 6.07 Intr - 191611 191478  134  2  2   90   99    17 0.505   3.36
 6.06 Intr - 192124 191987  138  2  0  131   79   193 0.999  23.14
 6.05 Intr - 192675 192552  124  0  1   67  105   104 0.957  10.16
 6.04 Intr - 200778 200661  118  2  1   30  101   130 0.001   8.97
 6.03 Intr - 206870 206820   51  1  0   84  115    16 0.012   1.92
 6.02 Intr - 233102 233036   67  0  1  135    4   101 0.021   4.36
 6.01 Init - 244741 244669   73  1  1   64   86    40 0.157   2.63
 6.00 Prom - 245000 244961   40                              -8.86

 7.06 PlyA - 246761 246756    6                               1.05
 7.05 Term - 247794 247626  169  2  1  124   48   293 0.995  26.25
 7.04 Intr - 248101 247884  218  1  2   80   94   308 0.999  27.90
 7.03 Intr - 248553 248435  119  1  2   91   80   170 0.999  16.68
 7.02 Intr - 249041 248904  138  0  0   71  103   117 0.999  11.94
 7.01 Intr - 249475 249349  127  1  1  126   95   204 0.999  25.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 233102 233011   92  0  2  135   42    89 0.888   6.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:33194418_33447114|GENSCAN_predicted_peptide_1|46_aa
DQGRQSKGGLGYPMSFSVAAHLVAVAFIALEMLMLSQKQGDSGNLE

>gi568815589f:33194418_33447114|GENSCAN_predicted_CDS_1|141_bp
gaccagggcagacagagcaagggtggcctgggatatccaatgtcattcagtgttgcagcc
catctggtggctgtggccttcatagccctggaaatgctgatgctgtctcagaaacaaggg
gatagtgggaacctggaataa

>gi568815589f:33194418_33447114|GENSCAN_predicted_peptide_2|55_aa
MQSQVSVHPPVGNAKADERSSAGEQAPSCACSSLVTHNTTDLQDLNLIVPGSEEG

>gi568815589f:33194418_33447114|GENSCAN_predicted_CDS_2|168_bp
atgcaaagccaggtgagcgttcatcctccagtggggaatgcaaaggcagatgagcgttca
tccgcaggggaacaggctccaagctgtgcctgctcctctctggtgactcacaacacgact
gatctccaagatctaaacctgattgtgcctggaagtgaagaagggtga

>gi568815589f:33194418_33447114|GENSCAN_predicted_peptide_3|86_aa
MAVRQWVIALALAALLVVDREVPVAAGKLPFSRMPICEHMVESPTCSQMSNLVCGTDGLT
YTNECQLCLARIKTKQDIQIMKDGKC

>gi568815589f:33194418_33447114|GENSCAN_predicted_CDS_3|261_bp
atggccgtccgccagtgggtaatcgccctggccttggctgccctccttgttgtggacagg
gaagtgccagtggcagcaggaaagctccctttctcaagaatgcccatctgtgaacacatg
gtagagtctccaacctgttcccagatgtccaacctggtctgcggcactgatgggctcaca
tatacgaatgaatgccagctctgcttggcccggataaaaaccaaacaggacatccagatc
atgaaagatggcaaatgctga

>gi568815589f:33194418_33447114|GENSCAN_predicted_peptide_4|418_aa
MQSVRLGGGALGFAFPKSRFILSSREETQTLEQNQKRKQSHSRLDFRPLRREPRQSEPPA
QRGPPPSGRPPARSTASGHDRPTRGAAAGARRPRMKKKTRRRSTRSEELTRSEELTLSEE
ATWSEEATQSEEATQGEEMNRSQEVTRDEESTRSEEVTREEMAAAGLTVTVTHTQIMDAL
KCVQWERLGGKQSLAHYSKRDETNTIQGTGQSSHRKQMACDEKGNEKHDLHVTSQQGSSE
PVVQDLAQVVEEVIGVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLIGKKNSPQEE
VELKKLKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKATIEQFMK
ILEEIDTLILPENFKDSRLKRKGLVKKVQAFLAECDTVEQNICQETERLQSTNFALAE

>gi568815589f:33194418_33447114|GENSCAN_predicted_CDS_4|1257_bp
atgcagtcagtcaggctgggcggcggagccttgggtttcgctttcccgaagagtcggttc
atcttgagcagccgcgaagaaacccaaacactagagcaaaaccagaaacggaagcagagt
cactcccgcctcgacttccggcccctccgccgggagccgcgccagtcggagcccccggcc
cagcgtggtccgcctccctctgggcgtccacctgcccggagtactgccagcgggcatgac
cgacccaccaggggcgccgccgccggcgctcgcaggccgcggatgaagaagaaaacccgg
cgccgctcgacccggagcgaggagttgacccggagcgaggagttgaccctgagtgaggaa
gcgacctggagtgaagaggcgacccagagtgaggaggcgacccagggcgaagagatgaat
cggagccaggaggtgacccgggacgaggagtcgacccggagcgaggaggtgaccagggag
gaaatggcggcagctgggctcaccgtgactgtcacccacacacaaatcatggatgcactc
aagtgtgttcagtgggagagacttggaggaaaacagtcacttgcccattacagcaagcga
gacgagaccaatacaatacagggtacagggcagtcaagccacaggaagcagatggcttgt
gatgaaaaaggcaatgagaagcacgaccttcatgttacctcccagcagggcagcagtgaa
ccagttgtccaagacctggcccaggttgttgaagaggtcataggggttccacagtctttt
cagaaactcatatttaagggaaaatctctgaaggaaatggaaacaccgttgtcagcactt
ggaatacaagatggttgccgggtcatgttaattgggaaaaagaacagtccacaggaagag
gttgaactaaagaagttgaaacatttggagaagtctgtggagaagatagctgaccagctg
gaagagttgaataaagagcttactggaatccagcagggttttctgcccaaggatttgcaa
gctgaagctctctgcaaacttgataggagagtaaaagccacaatagagcagtttatgaag
atcttggaggagattgacacactgatcctgccagaaaatttcaaagacagtagattgaaa
aggaaaggcttggtaaaaaaggttcaggcattcctagccgagtgtgacacagtggagcag
aacatctgccaggagactgagcggctgcagtctacaaactttgccctggccgagtga

>gi568815589f:33194418_33447114|GENSCAN_predicted_peptide_5|705_aa
MEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEA
LSRSYGTPELDEDDLEAELDALGDELLADEDSSYLDEAASAPAIPEGVPTDTKNKVKAFS
VYISMQNSKGFMLDHKSGNLKATSLLLPPDTWRVYLTSRTRHTDSGCATSVAVYTARRCE
YSRGAGSPGHVTWQVPYDEISAVHQHSYHPSGSKPKSQQTSFQSSPCNKSPKSHGLQNQP
WQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRG
AKPKKATQFVYSYGRGPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRK
GVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEGHRHTNAGHRNNMGPIPKDD
LNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTG
VKNLVIVETARHAGKPFPVVLGPLNVPKPALESMSVTIQVELQCECGRRKEMVICSEASS
TYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARRLAEAFHISEDSDPFNIRSSGS
KFSDSLKEDARKDLKFVSDVEKEMETLVEAVNKGKNSKKSHSFPPMNRDHRRIIHDLAQV
YGLESVSYDSEPKRNVVVTAIRNPGSSNLQKITKEPIIDYFDVQD

>gi568815589f:33194418_33447114|GENSCAN_predicted_CDS_5|2118_bp
atggaacaagccaattataccatccagtctttgaaggacaccaagaccacggttgatgct
atgaaactgggagtaaaggaaatgaagaaggcatacaagcaagtgaagatcgaccagatt
gaggatttacaagaccagctagaggatatgatggaagatgcaaatgaaatccaagaagca
ctgagtcgcagttatggcaccccagaactggatgaagatgatttagaagcagagttggat
gcactaggtgatgagcttctggctgatgaagacagttcttatttggatgaggcagcatct
gcacctgcaattccagaaggtgttcccactgatacaaaaaacaaggtgaaagctttttct
gtttatatttcaatgcaaaatagcaaaggctttatgcttgaccataagtctgggaatcta
aaagctactagtctcctcctcccgcccgacacctggcgcgtctatctgacgtcacgaacg
cgccacacagattcgggctgcgcaacctctgtggccgtctacacggcgcgcagatgcgaa
tattctcgcggcgccggaagtccggggcacgtgacctggcaggtcccttatgatgaaatc
tctgctgttcatcagcatagttatcatccgtcaggaagcaaacctaagagtcagcagacg
tctttccagtcctctccttgtaataaatcgcccaagagccatggccttcagaatcaacct
tggcagaaattgaggaatgagaagcaccatatcagagtcaagaaagcacagagtcttgct
gagcagacctcagatacagctggattagagagctcgaccagatcagagagtgggacagac
ctcagagagcatagtccttctgagagtgagaaggaagttgtgggtgcagatcccagggga
gcaaaacccaaaaaagcaacacagtttgtatacagctatggtagaggaccaaaagtcaag
gggaaactcaaatgtgaatggagtaaccgaacaactccaaaaccggaggatgctggaccc
gaaagtaccaaacctgtgggggttttccaccctgactcttcagaggcatcctctagaaaa
ggagtattggatgggtatggagccagacgaaatgagcagagaagatacccacagaaaagg
cctccctgggaagtggagggggccaggccacgaccaggcagaaatccaccaaaacaggag
ggccaccgacatacaaacgcaggacacagaaacaacatgggccccattccaaaggatgac
ctcaatgaaagaccagcaaaatctacctgtgacagtgagaacttggcagtcatcaacaag
tcttccaggagggttgaccaagagaaatgcactgtacggaggcaggatcctcaagtagta
tctcctttctcccgaggcaaacagaaccatgtgctaaagaatgtggaaacgcacacaggt
gtgaagaaccttgtcatcgtggaaactgccagacatgctggcaagccattccctgtggta
ctaggccccctgaatgtacccaaacctgcgctagagtccatgagtgtgaccatccaggta
gagctacagtgtgaatgtggacgaagaaaagagatggtgatttgctctgaagcatctagt
acttatcaaagaatagctgcaatctccatggcctctaagataacagacatgcagcttgga
ggttcagtggagatcagcaagttaattaccaaaaaggaagttcatcaagccaggagatta
gcagaggcatttcatatcagtgaggattctgatcctttcaatatacgttcttcagggtca
aaattcagtgatagtttgaaagaagatgccaggaaggacttaaagtttgtcagtgacgtt
gagaaggaaatggaaaccctcgtggaggccgtgaataagggaaagaatagtaagaaaagc
cacagcttccctcccatgaacagagaccaccgccggatcatccatgacttggcccaagtt
tatggcctggagagcgtgagctatgacagtgaaccgaagcgcaatgtggtggtcactgcc
atcaggaatcctgggagcagtaatttacagaaaataaccaaggagccaataattgactat
tttgacgtccaggactaa

>gi568815589f:33194418_33447114|GENSCAN_predicted_peptide_6|421_aa
MQGKEARGRNQGNVLPGGSGHVREGDSYEKELEAQKLLMGSAVEEACIYKSERQNMVQAS
GHRRSTRGSKMVSWSVIAKIQEILQRKMVREFLAEFMSTYVMMVFGLGSVAHMVLNKKYG
SYLGVNLGFGFGVTMGVHVAGRISGAHMNAAVTFANCALGRVPWRKFPVYVLGQFLGSFL
AAATIYSLFYRRSQQGVPPDRQDKNSGWRLYRDVSLLVGLGLGHCRGPVAWGGAQAWLTG
MLQLCLFAITDQENNPALPGTEALVIGILVVIIGVSLGMNTGYAINPSRDLPPRIFTFIA
GWGKQVFSNGENWWWVPVVAPLLGAYLGGIIYLVFIGSTIPREPLKLEDSVAYEDHGITV
LPKMGSHEPTISPLTPVSELQEELYKCSNSKAVLRQFQGQFTALVKDTDLRGISDHRLFA
E

>gi568815589f:33194418_33447114|GENSCAN_predicted_CDS_6|1266_bp
atgcagggcaaagaagcacgtggccgcaaccaagggaacgtgttgcctggagggtcaggc
catgtgagagagggggatagttacgagaaagaattagaggcccagaaacttctaatgggg
tcagccgtggaagaagcctgcatctacaaatctgaaagacaaaacatggttcaagcatcc
gggcacaggcggtccacccgtggctccaaaatggtctcctggtccgtgatagcaaagatc
caggaaatactgcagaggaagatggtgcgagagttcctggccgagttcatgagcacatat
gtcatgatggtattcggccttggttccgtggcccatatggttctaaataaaaaatatggg
agctaccttggtgtcaacttgggttttggcttcggagtcaccatgggagtgcacgtggca
ggccgcatctctggagcccacatgaacgcagctgtgacctttgctaactgtgcgctgggc
cgcgtgccctggaggaagtttccggtctatgtgctggggcagttcctgggctccttcctg
gcggctgccaccatctacagtctcttctacagacggagccagcagggagtccctccggat
agacaggacaagaactctggatggagactgtaccgagacgtgtctctgctggtgggcttg
ggtctggggcactgccgaggtcctgtggcttggggaggggcccaggcgtggctgaccggg
atgctccagctgtgtctcttcgccatcacggaccaggagaacaacccagcactgccagga
acagaggcgctggtgataggcatcctcgtggtcatcatcggggtgtcccttggcatgaac
acaggatatgccatcaacccgtcccgggacctgcccccccgcatcttcaccttcattgct
ggttggggcaaacaggtcttcagcaatggggagaactggtggtgggtgccagtggtggca
ccacttctgggtgcctatctaggtggcatcatctacctggtcttcattggctccaccatc
ccacgggagcccctgaaattggaggattctgtggcgtatgaagaccacgggataaccgta
ttgcccaagatgggatctcatgaacccacgatctctcccctcacccccgtctctgaactc
caagaggagctgtacaaatgctccaattccaaggcagttttaagacagtttcaggggcaa
ttcacagctcttgtcaaggacacagacctgagaggaatttcagatcaccggttgtttgct
gagtga

>gi568815589f:33194418_33447114|GENSCAN_predicted_peptide_7|256_aa
MFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLGILIAGQVSGAHLNPAVTFAMCFLARE
PWIKLPIYTLAQTLGAFLGAGIVFGLYYDAIWHFADNQLFVSGPNGTAGIFATYPSGHLD
MINGFFDQFIGTASLIVCVLAIVDPYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNP
ARDFGPRLFTALAGWGSAVFTTGQHWWWVPIVSPLLGSIAGVFVYQLMIGCHLEQPPPSN
EEENVKLAHVKHKEQI

>gi568815589f:33194418_33447114|GENSCAN_predicted_CDS_7|771_bp
atgtttggctgtggctccgtggcccaggttgtgctcagccggggcacccacggtggtttc
ctcaccatcaacctggcctttggctttgctgtcactctgggcatcctcatcgctggccag
gtctctggggcccacctgaaccctgccgtgacctttgccatgtgcttcctggctcgtgag
ccctggatcaagctgcccatctacaccctggcacagacgctgggagccttcttgggtgct
ggaatagtttttgggctgtattatgatgcaatctggcacttcgccgacaaccagcttttt
gtttcgggccccaatggcacagccggcatctttgctacctacccctctggacacttggat
atgatcaatggcttctttgaccagttcataggcacagcctcccttatcgtgtgtgtgctg
gccattgttgacccctacaacaaccccgtcccccgaggcctggaggccttcaccgtgggc
ctggtggtcctggtcattggcacctccatgggcttcaactccggctatgccgtcaaccct
gcccgggactttggcccccgcctttttacagcccttgcgggctggggctctgcagtcttc
acgaccggccagcattggtggtgggtgcccatcgtgtccccactcctgggctccattgcg
ggtgtcttcgtgtaccagctgatgatcggctgccacctggagcagcccccaccctccaac
gaggaagagaatgtgaagctggcccatgtgaagcacaaggagcagatctga