GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:28:30

Sequence gi568815575f:21743168_21982652 : 239485 bp : 40.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9979  10112  134  0  2   77  103    49 0.855   4.96
 1.02 Intr +  11260  11354   95  1  2   80   81    37 0.665   0.89
 1.03 Intr +  13484  13622  139  0  1   79   63    61 0.341   1.30
 1.04 Intr +  19551  19651  101  0  2   76   97    76 0.301   6.13
 1.05 Intr +  28076  28254  179  0  2   52   74   145 0.466   8.22
 1.06 Intr +  42424  42591  168  0  0   -5   95   144 0.145   5.02
 1.07 Intr +  48241  48274   34  0  1   97   41    35 0.080  -3.42
 1.08 Term +  49201  49364  164  2  2   69   47   130 0.223   4.12
 1.09 PlyA +  49891  49896    6                               1.05

 2.00 Prom +  56484  56523   40                              -5.95
 2.01 Init +  60319  60439  121  0  1  107   76    47 0.908   5.80
 2.02 Term +  63580  63656   77  2  2  -49   37   231 0.717   1.32
 2.03 PlyA +  63857  63862    6                               1.05

 3.00 Prom +  86558  86597   40                              -3.45
 3.01 Init +  96568  96642   75  0  0   97  100    89 0.235  12.31
 3.02 Intr + 100003 100151  149  0  2   70   21    70 0.246  -3.39
 3.03 Intr + 102004 102217  214  1  1  106  103    93 0.490  10.40
 3.04 Term + 108112 108201   90  0  0  113   46    62 0.397   1.24
 3.05 PlyA + 109261 109266    6                               1.05

 4.00 Prom + 109903 109942   40                              -6.95
 4.01 Sngl + 113318 114436 1119  1  0   98   48  1335 0.998 126.97
 4.02 PlyA + 114491 114496    6                               1.05

 5.00 Prom + 120506 120545   40                              -6.75
 5.01 Init + 121254 121302   49  2  1   70   58    48 0.393  -0.84
 5.02 Intr + 125300 125418  119  0  2  135   84    21 0.964   5.66
 5.03 Intr + 126331 126511  181  0  1   69   85   107 0.974   7.02
 5.04 Intr + 129994 130113  120  2  0   97   32    76 0.688   2.45
 5.05 Intr + 134875 134969   95  2  2   60  111    23 0.979   0.56
 5.06 Intr + 135330 135525  196  2  1   61  109    99 0.994   7.37
 5.07 Term + 139286 139488  203  0  2  100   35   114 0.719   3.87
 5.08 PlyA + 140082 140087    6                               1.05

 6.00 Prom + 143481 143520   40                              -5.95
 6.01 Init + 150233 150374  142  1  1   83   49   109 0.306   6.84
 6.02 Term + 154886 155046  161  0  2  108   55   109 0.979   6.72
 6.03 PlyA + 155121 155126    6                               1.05

 7.03 PlyA - 157666 157661    6                               1.05
 7.02 Term - 161258 161152  107  0  2  100   48   100 0.656   4.79
 7.01 Init - 174055 173977   79  1  1   64   68    44 0.188   1.27
 7.00 Prom - 178402 178363   40                              -5.55

 8.00 Prom + 181565 181604   40                              -5.55
 8.01 Init + 186149 186278  130  1  1   50   98    84 0.802   4.09
 8.02 Intr + 186588 186737  150  1  0   28   67   131 0.196   4.21
 8.03 Intr + 192727 192862  136  2  1   49   27    85 0.049  -2.79
 8.04 Intr + 196871 197153  283  2  1   52   50   211 0.866  10.20
 8.05 Intr + 197633 197706   74  1  2   86  100    75 0.698   5.79
 8.06 Intr + 204122 204204   83  2  2   12   84    96 0.018  -0.04
 8.07 Term + 211221 211357  137  1  2   73   48   113 0.017   3.00
 8.08 PlyA + 212100 212105    6                               1.05

 9.00 Prom + 215298 215337   40                              -5.85
 9.01 Init + 216652 216794  143  0  2   64   86   142 0.634  11.34
 9.02 Intr + 223946 224149  204  2  0   51   99   109 0.242   5.69
 9.03 Intr + 224999 225100  102  2  0    1   97   131 0.186   3.67
 9.04 Intr + 233894 234069  176  2  2   94   83   181 0.906  16.86
 9.05 Intr + 234793 234882   90  2  0  103   34   142 0.602   9.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_1|337_aa
MQSGILAKFIGPSLVVCSMTCFQRLLYILPLKNPFSLRICISRDSLSFQSYEDTLLPNAS
GEGTLEHQDKSFRRRNVTSIRDVECGTHLPSSSECFIPGPRKENYTLDTHSTPTRATAFR
PKRTAGDKVCPLGCMLHDDIPPSPADAGTFKKTDVQGGQPAQKQNIKPPKLRALRESIAR
QPPPPEQAPLSMAERPIDSSHHRTLCRQCPVPAWSQKHRSNKLGLATGIKSGSSFVRLIP
QPVGSDAISSNVRIELEDTKLASATELIVCLLLKEQQNETSVLGCCQRRPHEDFISAHPP
PGVCGDYVGNLDFHSHLAVMKHPSRNWSGVRGGLMKS

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_1|1014_bp
atgcagagtggaatccttgccaaattcataggcccttccttggtggtttgttcaatgaca
tgtttccagaggttgctctacatcctgccacttaagaaccccttcagtttaaggatctgt
attagtcgtgacagtctcagtttccaaagttacgaagacactctccttcctaatgcctcg
ggtgagggaacactagagcaccaggataaatcattcaggaggagaaatgtcacctctatc
agggatgtagagtgcggaacacaccttccttcttcatctgaatgcttcatcccgggacca
agaaaagaaaactacaccttagatacacactccactcccaccagggccactgcttttcgt
ccaaagaggacagcaggtgacaaggtttgtcccctgggatgcatgctgcatgatgacatc
cctccttccccagcagatgctggcacctttaaaaagactgatgtgcaaggaggccaacca
gcacaaaaacagaacattaaaccaccaaagctaagagccctcagggagtccattgcacgc
cagccacctccaccagaacaggcaccgttatccatggctgagagacccatagacagttca
catcacaggactctgtgcagacaatgcccagtaccagcttggagccagaagcacaggtca
aacaaactggggcttgcaactggcatcaaaagtgggagcagttttgtgagactgatccct
caacctgtgggatctgatgctatctccagtaatgtcagaattgaattagaggacacaaaa
ctggcgtctgctacagaattgattgtttgcttgctgctgaaagaacagcaaaatgaaaca
tctgtgttagggtgttgtcagagaaggccacatgaggactttatttctgctcacccacct
cctggtgtctgtggagactacgtggggaacctggactttcattcccatttggcagtaatg
aagcacccctcgcgcaactggagtggtgtcagaggaggcctgatgaagagttaa

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_2|65_aa
MEKKRNARVGMAIKAWSHKGLIEEEKKKKTAVQLHKLDTQEEEEEEEEEEDEEEDKEEEE
KKKMI

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_2|198_bp
atggagaaaaagagaaatgcaagagttgggatggctatcaaagcctggtcacacaagggc
ctgattgaggaggaaaaaaaaaaaaaaacagcagttcagctacacaagctagacacacag
gaagaagaagaagaagaagaggaggaggaggatgaagaagaggacaaagaggaagaggag
aagaagaagatgatttaa

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_3|175_aa
MIPVSLVVVVVGGWTVVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRA
FYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGKTLMQTLAQMMADSPSSYSSSSSSS
SSSSSSSSSSSSSSSSLHNEQVLQVVTGGVLVPEKLASSKNEIAFLLFIMIEMEK

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_3|528_bp
atgattccggtgtcgctggtggtggtggtggtgggtggctggactgtcgtctacctgacc
gacttggtgctgaagtcatctgtctattttaaacattcttatgaagactggctggaaaac
aacggactgagcatctcccctttccacataagatggcaaactgctgttttcaatcgtgcc
ttttacagttggggacggcggaaagcaaggatgctttaccaatggttcaattttggaatg
gtgtttggcgtaattgccatgtttagctcattttttctccttggaaaaacgctgatgcag
actttggcacaaatgatggctgactctccctcttcttattcttcctcctcttcttcctct
tcctcctcttcttcctcttcctcttcttcatcttcttcctcttcctcgcttcacaatgaa
caggtgttacaagttgtgactggtggtgtgcttgttccagagaaactggctagttcgaaa
aatgaaatagcgtttttgctttttattatgatagaaatggagaagtga

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_4|372_aa
MASNEDFSITQDLEIPADIVELHDINVEPLPMEDIPTESVQYEDVDGNWIYGGHNHPPLM
VLQPLFTNTGYGDHDQEMLMLQTQEEVVGYCDSDNQLGNDLEDQLALPDSIEDEHFQMTL
ASLSASAASTSTSTQSRSKKPSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLE
GEFSVTMWSPNDNNDQGAVGEGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTK
VKPKRSKGEPPKTVPCSYSGCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRR
HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKT
HILTHVKTKNNP

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_4|1119_bp
atggcctccaacgaagatttctccatcacacaagacctggagatcccggcagatattgtg
gagctccacgacatcaatgtggagccccttcctatggaggacattccgacggaaagcgtc
cagtacgaggatgtggatggcaattggatctacggtggccacaaccatccgccattgatg
gtgttgcagccgctcttcacgaacacgggctatggcgaccacgaccaggaaatgcttatg
ttgcagacacaagaggaagtggtgggctattgcgactcagacaaccagctaggcaacgac
ttggaggaccagttggccctcccggatagcattgaagacgagcacttccagatgaccctg
gcctctctgtcggcctcggcggcatcaacatcaacatcaacccagagccgcagcaaaaag
cccagcaaaaagcccagcggcaagagtgccaccagcactgaggccaacccggcaggcagc
agctccagcctgggcacgaggaagtgggagcagaagcaaatgcaggtcaaaacgctggag
ggtgagttttccgtgactatgtggtcccctaacgataacaatgaccaaggggcagtgggt
gaaggccaggctgaaaacccacctgattattccgagtacttgaaagggaagaaacttcct
cctggggggttaccaggcattgatctctcagatcctaaacagctggcagaatttactaaa
gtgaagcccaaaaggtccaaaggagaacctcccaaaacagtcccttgctcttatagcggc
tgcgaaaagatgttccgggattacgccgccatgagaaaacatctccacatccacgggccc
agagtccacgtatgtgcagaatgtggcaaagcttttcttgagagctcaaagctgagacga
caccagctggtccacaccggcgagaagccctttcagtgcacattcgaaggctgcgggaaa
cgcttttcccttgatttcaatttgcgcacacacttgcgcatccacaccggcgataagccc
ttcgtgtgccccttcgatgtttgcaacaggaagttcgctcagtcaaccaacctgaaaacc
cacatattaacgcatgtgaagaccaaaaacaacccgtga

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_5|320_aa
MGFHHVGQAGLELLTTGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPA
IGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRDAVL
DLNSLKVKRPFGETPRRTLSEGLEPFVPGIDLWSYLAYKRLDGSTECCNNHSLTDVCFSY
RNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQID
MLYVGHPLHLHYTGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILL
GGSVLLAANVTLGLWMVTAR

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_5|963_bp
atggggtttcaccacgttggccaggctggtctcgaactcctgaccacaggtatctggcat
aattttgtccttgcactcttgggtattttagctcttgttctcctcccagtaattctcttg
ccattttactacactggagttggggtgctcatcactgaagttgctgaggactctcctgcc
attggacccagaggcctttttgtgggagaccttgtcacccatctacaggattgtcctgtt
actaatgtgcaagattggaatgaatgtttagataccatcgcctatgagccccaaattggt
tactgtataagtgcatcaactttacagcagttaagtttcccagttagagatgcagtatta
gatttaaactctttgaaggttaaacggccttttggggaaactccaagaagaacactgagt
gagggcttagagccctttgtacctggaatagatctctggtcttatctggcatacaaacga
ctagatggttcaactgaatgctgtaacaatcacagcctcacagatgtgtgcttttcctac
agaaataattttaataagcgtttgcatacatgtcttcctgcccggaaagcagttgaagca
actcaagtttgcagaaccaataaagactgtaaaaaaagctcaagttcaagtttctgtata
ataccttctttggaaactcacactcgcttaataaaagtaaaacacccacctcagattgat
atgttatacgtaggacatcctctgcatcttcactacacaggagctctggctattgttaat
gcagtaccctgctttgctttggatggacaatggattctaaactctttcttggatgccacc
cttacctcagtgattggagacaatgatgtcaaagatctaatagggtttttcatcttgctg
ggtggcagtgtacttttggctgccaatgtgaccctgggactctggatggttacagcacgg
taa

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_6|100_aa
MDPYQSVAWGLETPVVEEFIDDLERETLVWQEKLSQVGVDAGWWSGWGVAAGPHDTSPIL
EAECSKSVYKMQKPPISKKNGYASTSLSLLQARAPIRDGP

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_6|303_bp
atggacccgtaccagtccgtggcctgggggttggagacccctgtagtagaagagttcata
gatgatcttgagagagaaactctagtgtggcaggagaagttgagccaggttggagtggat
gctggatggtggagtgggtggggagttgctgctggaccacatgacaccagtcccattctt
gaagcagaatgttcaaagagtgtgtacaaaatgcagaagccacccatttccaagaaaaac
ggctatgcttcaaccagcctaagtctactgcaagcaagggcacccataagagatggacct
tga

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_7|61_aa
MAFTATWMELEIVILGEVTQEWKTKYVWQLAQFDMVADPQTKVLSHYGGQSCQTTCDGHV
A

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_7|186_bp
atggcattcacagcaacctggatggaattggagattgttattctaggtgaagtaactcag
gaatggaaaaccaaatatgtgtggcaactggcacagtttgacatggtagctgatccacag
actaaggttctgagtcactatggcggtcagagctgccagacaacctgtgatggacatgta
gcatga

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_8|330_aa
MSPKCLMWSAPWAVVQSLFLFAIYERVNVSSLRLRKKDQAGEEARFENHWYREKREDVPR
MEAVRSSTFTEKTWRQEEVGEGTIKLKKQGEPEAAAPFYIPASNVRGIQFLRILTNTYFL
AFKMCFFIYSHIAILVDVDSHNPSVKNKPPAKAIAINRGASDGGVLLDKQLRSLQFPNSI
LTTMLSSYWLLPHFILRETVDNVNAQALSIQSSNAKQTLANNGNNPNGFNCSIAWHRASP
HYGSSTAQHARLHARRQSLSGLMTGSGECMLGPYSTRTESQLVEGDHLGAMILIARFRAI
WKNLEVQISKPFTWLPSRLESIIVHGHLCV

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_8|993_bp
atgagtccaaagtgtctgatgtggtcagctccgtgggctgtggtacagagtctgttctta
ttcgctatttatgagcgtgtaaatgtctcaagtttgagattgcgcaagaaagaccaagca
ggggaagaagccagatttgagaaccattggtacagggaaaagagagaagacgtgccaagg
atggaagctgtgagaagctcaacatttacagaaaaaacatggagacaggaagaagttggt
gaaggcaccatcaaattgaagaagcagggggaaccagaagcagctgcaccgttttacatt
cccgccagcaatgtacgagggatccaatttctccgcatccttaccaacacttattttctg
gcttttaaaatgtgtttctttatttactcacatatagccatccttgtggacgtggacagc
cataaccccagtgtcaaaaataagccccccgcaaaggctattgccattaatagaggcgcc
agtgatggaggagtcctgctagacaagcaactccggagtctgcagtttcctaattcaata
ttaacaacaatgctgtcctcttactggcttctccctcattttattttgcgtgaaactgtg
gataacgtaaatgcccaagcgctttctattcagtcctcaaatgcaaagcagacccttgct
aataatggtaataatccgaatgggtttaactgcagcattgcatggcacagggcctcgcct
cactatggcagcagcacggcacagcacgctcgacttcatgctcggcgccaaagcctttcg
gggctgatgactgggagtggggaatgcatgcttgggccctactctacacggactgaatca
cagttggtggagggggaccatctaggtgcaatgattttgattgcccgtttcagagccatc
tggaaaaatttggaagtacagatttccaagcccttcacatggctgccttctcgtctggaa
tccatcatagtgcacggccatctctgtgtttga

>gi568815575f:21743168_21982652|GENSCAN_predicted_peptide_9|239_aa
MPAFVLPLAGELQTGSIASQLAHHLPVERVQIPERSRQEGAGYKPDQSSVLKLCLIGLPS
ERFFLTILPSSPCSPADGETILKGLQSIFQEQGMAESVHTWQDHGYLATYTNKNGRMASS
SAAGPQGQPEQSLKQRFAIFLAPRAWYFCKLPPIVRGGAIDRYWPTADGRLVEYDIDEVV
YDEDSPYQNIKILHSKQFGNILILSGDVNLAESDLAYTRAIMGSGKEDYTGKDVLILGX

>gi568815575f:21743168_21982652|GENSCAN_predicted_CDS_9|717_bp
atgcctgcgtttgtgcttccccttgcgggggagttgcagactggctctattgccagccag
ctcgcacaccatcttcccgtggagagagtgcagatccctgaaaggagcaggcaagaaggg
gccgggtataagcctgaccaaagctcagtcctcaaactgtgcctcattggccttccttct
gaacgtttctttctgaccatcttgccttcttccccttgttctccagctgatggtgagacc
attctaaaaggcctccagtccattttccaggagcaggggatggcggagtcggtgcacacc
tggcaggaccatggctatttagcaacctacacaaacaagaacggcaggatggccagcagc
agtgctgcagggccccaggggcagcccgaacagagcctcaagcagcgctttgccatcttc
ctggctcctagagcctggtatttctgtaaattaccacccatagtgcgaggaggagccatc
gacagatactggcccaccgccgacgggcgcctggttgaatatgacatagatgaagtggta
tatgacgaagattcaccttatcaaaatataaaaattctacactcgaagcagtttggaaat
attctcatccttagtggggatgttaatttggcagagagtgatttggcatatacccgggcc
atcatgggcagtggcaaagaagattacactggcaaagatgtactcattctgggagnn