Result of FASTA (omim) for pF1KB9448
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9448, 487 aa
  1>>>pF1KB9448 487 - 487 aa - 487 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.5049+/-0.000363; mu= 12.7719+/- 0.023
 mean_var=97.9942+/-19.362, 0's: 0 Z-trim(115.0): 44  B-trim: 0 in 0/56
 Lambda= 0.129561
 statistics sampled from 25081 (25125) to 25081 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.295), width:  16
 Scan time: 10.510

The best scores are:                                      opt bits E(85289)
XP_016859659 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
XP_005246639 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
NP_001308242 (OMIM: 600800) NGFI-A-binding protein ( 487) 3199 608.5 1.4e-173
XP_005246640 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
XP_011509521 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
XP_016859665 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 487) 3199 608.5 1.4e-173
NP_001308241 (OMIM: 600800) NGFI-A-binding protein ( 487) 3199 608.5 1.4e-173
NP_005957 (OMIM: 600800) NGFI-A-binding protein 1  ( 487) 3199 608.5 1.4e-173
XP_016859662 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859661 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859660 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859663 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
NP_001308243 (OMIM: 600800) NGFI-A-binding protein ( 486) 3180 604.9 1.6e-172
XP_005246643 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 486) 3180 604.9 1.6e-172
XP_016859664 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 457) 2195 420.8  4e-117
XP_005246644 (OMIM: 600800) PREDICTED: NGFI-A-bind ( 457) 2195 420.8  4e-117
NP_001308244 (OMIM: 600800) NGFI-A-binding protein ( 457) 2195 420.8  4e-117
NP_001317234 (OMIM: 602381) NGFI-A-binding protein ( 461)  617 125.9 2.5e-28
NP_005958 (OMIM: 602381) NGFI-A-binding protein 2  ( 525)  617 125.9 2.8e-28


>>XP_016859659 (OMIM: 600800) PREDICTED: NGFI-A-binding   (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
XP_016 TEPEDSR
              

>>XP_005246639 (OMIM: 600800) PREDICTED: NGFI-A-binding   (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
XP_005 TEPEDSR
              

>>NP_001308242 (OMIM: 600800) NGFI-A-binding protein 1 i  (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
NP_001 TEPEDSR
              

>>XP_005246640 (OMIM: 600800) PREDICTED: NGFI-A-binding   (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
XP_005 TEPEDSR
              

>>XP_011509521 (OMIM: 600800) PREDICTED: NGFI-A-binding   (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
XP_011 TEPEDSR
              

>>XP_016859665 (OMIM: 600800) PREDICTED: NGFI-A-binding   (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
XP_016 TEPEDSR
              

>>NP_001308241 (OMIM: 600800) NGFI-A-binding protein 1 i  (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
NP_001 TEPEDSR
              

>>NP_005957 (OMIM: 600800) NGFI-A-binding protein 1 isof  (487 aa)
 initn: 3199 init1: 3199 opt: 3199  Z-score: 3237.5  bits: 608.5 E(85289): 1.4e-173
Smith-Waterman score: 3199; 100.0% identity (100.0% similar) in 487 aa overlap (1-487:1-487)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
              430       440       450       460       470       480

              
pF1KB9 TEPEDSR
       :::::::
NP_005 TEPEDSR
              

>>XP_016859662 (OMIM: 600800) PREDICTED: NGFI-A-binding   (486 aa)
 initn: 2382 init1: 2382 opt: 3180  Z-score: 3218.4  bits: 604.9 E(85289): 1.6e-172
Smith-Waterman score: 3180; 99.8% identity (99.8% similar) in 487 aa overlap (1-487:1-486)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQ-PEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
               370       380       390       400       410         

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
     420       430       440       450       460       470         

              
pF1KB9 TEPEDSR
       :::::::
XP_016 TEPEDSR
     480      

>>XP_016859661 (OMIM: 600800) PREDICTED: NGFI-A-binding   (486 aa)
 initn: 2382 init1: 2382 opt: 3180  Z-score: 3218.4  bits: 604.9 E(85289): 1.6e-172
Smith-Waterman score: 3180; 99.8% identity (99.8% similar) in 487 aa overlap (1-487:1-486)

               10        20        30        40        50        60
pF1KB9 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMAS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
       ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSSQ-PEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
               370       380       390       400       410         

              430       440       450       460       470       480
pF1KB9 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIK
     420       430       440       450       460       470         

              
pF1KB9 TEPEDSR
       :::::::
XP_016 TEPEDSR
     480      




487 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 23:26:18 2016 done: Thu Nov  3 23:26:19 2016
 Total Scan time: 10.510 Total Display time:  0.110

Function used was FASTA [36.3.4 Apr, 2011]
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