GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:26:40

Sequence gi568815596f:190559177_190790330 : 231154 bp : 39.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4184   4253   70  0  1  124   60    54 0.510   3.52
 1.02 Intr +  19178  19307  130  2  1   88   80    77 0.162   6.68
 1.03 Term +  28950  29201  252  2  0   72   43    97 0.021  -1.75
 1.04 PlyA +  31607  31612    6                               1.05

 2.00 Prom +  40037  40076   40                              -1.65
 2.01 Init +  49063  49341  279  0  0   51   75   125 0.089   4.56
 2.02 Intr +  55987  56108  122  0  2   53   36    88 0.139  -1.53
 2.03 Intr +  56836  57148  313  1  1  136   39    81 0.028   3.26
 2.04 Intr +  77721  77849  129  2  0   91   84    38 0.087   3.67
 2.05 Intr +  78800  78851   52  1  1   59  106    45 0.071   0.96
 2.06 Intr +  79655  79791  137  0  2   65   37    89 0.016   0.87
 2.07 Intr +  81837  81907   71  2  2  135   45    29 0.009   0.36
 2.08 Intr +  89931  90520  590  0  2   48   26   391 0.076  20.24
 2.09 Intr +  96482  96638  157  0  1   64   62    74 0.220   0.55
 2.10 Intr +  99982 100819  838  1  1  102   72   625 0.513  52.76
 2.11 Intr + 111150 111283  134  2  2   35  108   149 0.987  10.12
 2.12 Intr + 113925 113976   52  0  1  118   64    39 0.878   2.49
 2.13 Intr + 124562 124651   90  1  0   75   92   115 0.956   9.87
 2.14 Intr + 126300 126462  163  2  1   66   83   176 0.792  13.53
 2.15 Intr + 128025 128141  117  1  0   74   94    15 0.122   0.22
 2.16 Intr + 145906 146001   96  2  0  105   74    60 0.485   5.36
 2.17 Intr + 152074 152185  112  2  1   44   91    67 0.113   1.12
 2.18 Intr + 154644 154739   96  0  0   38  100    59 0.197   0.31
 2.19 Term + 158602 158740  139  1  1   55   47   137 0.286   2.75
 2.20 PlyA + 159411 159416    6                               1.05

 3.04 PlyA - 159984 159979    6                               1.05
 3.03 Term - 162978 162906   73  2  1   82   45    72 0.323  -1.30
 3.02 Intr - 165815 165640  176  2  2    9   95   115 0.315   2.12
 3.01 Init - 170586 170503   84  0  0   67   31   119 0.360   4.97
 3.00 Prom - 175189 175150   40                              -6.65

 4.00 Prom + 176140 176179   40                              -5.75
 4.01 Init + 183409 183462   54  0  0  105   70    52 0.790   6.43
 4.02 Term + 185106 185165   60  2  0  112   48    71 0.856   2.33
 4.03 PlyA + 185239 185244    6                               1.05

 5.00 Prom + 192419 192458   40                              -3.65
 5.01 Init + 200837 200981  145  1  1   93  101    88 0.995  10.93
 5.02 Intr + 201082 201206  125  2  2   40  117   110 0.962   8.48
 5.03 Intr + 201689 201945  257  1  2   49   97   215 0.886  13.82
 5.04 Intr + 203102 203230  129  2  0   68  115    17 0.682   1.29
 5.05 Term + 211015 211219  205  1  1   68   50   143 0.247   4.36
 5.06 PlyA + 212597 212602    6                               1.05

 6.04 PlyA - 212822 212817    6                               1.05
 6.03 Term - 216141 215374  768  0  0  -34   41   279 0.108   3.41
 6.02 Intr - 218462 218306  157  1  1   12   -4   150 0.057  -2.71
 6.01 Init - 224601 224525   77  0  2   89   84    53 0.491   5.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  82286  82200   87  2  0  130   93    14 0.843   5.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:190559177_190790330|GENSCAN_predicted_peptide_1|150_aa
XRRFHTPTAQQTKLKNVLWAVVAGLAAGEEQAGTCRLMTFLLVTAPDYKCAEQDYSASIP
RPREQRQILNPVGDGSRKSQTFLQWDLVAKRELWPILEDFPEKEKLLWGTRDEALTRIQA
FNGLDYKMLVDDNEKIISQSFCLFLFLPLT

>gi568815596f:190559177_190790330|GENSCAN_predicted_CDS_1|453_bp
ngtagacgttttcacactcccactgctcagcagacaaagctcaagaatgtgctttgggcg
gtagtggcgggcctagctgcaggagaagaacaggcaggcacatgcaggctgatgactttc
ctgcttgtgacagctccagattacaaatgtgcagaacaagattacagtgccagcattccc
aggcccagggagcaaaggcagatcttaaatccagttggagatggcagtagaaagtctcag
acatttttgcagtgggacctggtggctaaaagggaactttggcctattttggaagatttt
cctgaaaaagaaaaactcctgtggggaaccagagatgaggcattgactaggatccaggct
ttcaatggcctagattataaaatgttggtggatgataatgagaaaataatctctcaatct
ttctgtctctttctctttcttcccctgacctaa

>gi568815596f:190559177_190790330|GENSCAN_predicted_peptide_2|1228_aa
MVPMCESSDAGNSYMPKRSYKVLHLSEKVKVLDLTRKEKKIAEINKIYKNKSFTREFVKK
NIFVLVTAPQTVNVMAIEYDKCLVKMKKAFSLQVKGSVPQDFPQIQMPITSSGLAPVLLT
EKLQIRGSHDSFLSCSLPHLQLCHVTVALLLKVCSLISGPSSCHFKTSPPETMSSSKGRK
QLLKFSSMCGWSEEGCWDKILREKPQPRGMGPNTEGQNLNQKHLYDEKVKKKKDDSKMNI
QTDKSLFLASCLNLFDGSPKGLAVFSKCGLGVPSGFRSFTKETNADISNTLGAREGGERT
RAADGSQAALDQFGTWWASFLQLNKDRNKQTGHQMWPRCQFCHWICPNYSIPTLPSVPRQ
EAGLEEFILEEPPPPPRPSERRRGGWAGRSGGPEVGGSRESAPTTFPSPLDGSGGVPAPA
AARGGRAGGRRFGVGAEQSSGRARQDRCSRWLSTYRSGRSPLPVRQVRDTFAAERPRANL
GRLSRGATRALWGRCPGEAGSARPPPEGEGGPGLVWAIPGDILCARAAGSAALTRAFSLR
ERLGCRVRFANGAGGVTRRSGGVRLTIKALCPIKKSSHPSLETVREILFSIAKQELTGSF
VGQTSSLLHLAQLESGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDD
VQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIY
KLPEGSPTWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGE
SRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNE
VKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVN
EAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDG
FPDFQDSVQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAG
LYRQSSEEHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHS
SGGRRGQVSGALGIKEQDLREAVWMEAELAPRDCCSLLTWHNQGLQRGHLYGSSCSLLLW
AMSLLITAITRSMSNLQISLKRIENAGERSLQVTPTQYPSPKRELAARKVDPGNNNNNKN
QWGESPRVGADGRDCEVGGICGASGKFT

>gi568815596f:190559177_190790330|GENSCAN_predicted_CDS_2|3687_bp
atggtcccaatgtgcgagagtagtgatgctggcaattcgtatatgccaaagagaagctat
aaagtgcttcacttaagtgaaaaggtgaaagttcttgacttaacaaggaaagaaaaaaaa
attgctgaaattaacaaaatttataagaacaaatcttttacccgtgaatttgtaaagaaa
aatatatttgtgctggttacagcacctcaaactgtaaacgtcatggccatagagtatgat
aagtgcttagttaagatgaaaaaggcattcagtttgcaggttaagggctcagtcccacaa
gacttcccccaaattcagatgccaatcacaagctccgggttggcacctgtgctcctgacc
gagaagctacagatcagaggttcacacgactccttcctcagctgctctcttcctcaccta
caactttgtcatgtaactgttgcccttctgttaaaagtctgcagtttaatttcaggcccg
agttcctgccacttcaagacttcaccacctgagacaatgagcagcagcaaagggagaaag
cagctgctcaaattctccagtatgtgtggatggagtgaggagggatgctgggataaaata
cttagagaaaaaccccagcccaggggcatgggcccaaatactgaggggcaaaacctgaac
cagaagcacctatatgatgagaaagtgaagaaaaaaaaggatgacagtaaaatgaacatt
cagacagacaaatctctgttcttagcatcttgcttaaatcttttcgatggctccccaaaa
gggctagcagtgttctccaagtgtggtctaggggtcccttctggcttcagatccttcact
aaggaaacaaatgcagacatcagtaacacactgggtgcccgagagggaggtgaaagaacc
agagcagcagatgggtctcaagcagcactggaccagtttggcacctggtgggccagtttt
ctgcagctaaacaaggaccggaacaaacaaacagggcatcagatgtggcccagatgccag
ttctgtcactggatctgtcccaactactccatcccaacactcccatctgtcccacgtcaa
gaggctggtttagaggagtttatcctggaggagccgccgccgccgccgcggccaagcgag
cgccgtcggggcgggtgggcgggaagaagcggcgggcccgaggtgggggggagcagagag
agcgcgcccaccaccttcccttcccccctcgatgggagcgggggcgtcccggctcctgca
gccgccagaggagggagagccgggggccgtcgcttcggagttggggctgagcagtcctcg
gggagagcgcgccaagaccgctgcagccgctggctgagtacgtaccggagcggacggtcg
ccactcccggtccgccaagtgcgggacactttcgcggctgagcggccacgggcgaacttg
gggcggctgagtcgcggggccacgcgggcactttgggggcggtgtccgggggaagcgggc
tccgcgcggccgccgccggaaggagagggcggccccgggctcgtgtgggcgattcccgga
gacattctgtgtgccagggcggcggggagcgcggccctgactcgtgcattttccctccga
gaaaggttggggtgccgagtccgttttgctaacggggctgggggcgtcacacggcgctct
gggggtgtgcgattgacaattaaagccctctgtcctatcaaaaaatcctcacatcccagc
ttggagactgtcagggaaattttgttttccatagcgaaacaggagttgaccggtagtttt
gtgggccagactagctccctgcttcacttagcacagttggaatctggcaggttaaaccca
tccagagtaatggctgcggccttacccaggaccctgggggagttgcagctgtatagaata
ttacaaaaagccaatctactttcttattttgatgcctttatccaacaaggtggtgatgat
gtccagcaactctgtgaagcaggagaagaggagtttttggaaatcatggcactcgtgggc
atggctagcaagccccttcatgttagaaggctgcagaaggctttgagagactgggtcaca
aaccctgggcttttcaatcagccactgacttcccttcctgtcagtagcatacccatctat
aaattaccagagggatcaccaacatggctgggaatatcctgcagtagttatgaaaggagt
agcaatgcccgggaacctcatttaaaaatccccaaatgtgctgccaccacctgtgtgcag
agcttgggacaggggaagtcagatgtggttgggagcctagcactgcagagtgttggtgag
tccagactctggcaaggccaccatgccactgagagcgagcacagcctctccccagcagac
ctgggctcccccgcgtccccaaaggagagcagtgaggcgctggatgctgctgctgcgctc
tctgtggctgagtgtgtggagcggatggcccccacactgccaaaaagtgacttgaatgaa
gtgaaagagctgctaaaaaccaacaagaagttggccaaaatgattggtcacatctttgag
atgaacgatgatgatccacacaaagaggaggaaattcggaaatacagtgcaatatatggc
agatttgactcaaagaggaaggatgggaaacatctcacacttcatgagctcactgttaat
gaagcggctgctcaactctgtgtgaaggataatgccctgctgacaagaagagatgagctt
tttgccttggctcgacagatttctcgagaagtcacctataaatatacttacagaaccacc
aagtcaaaatgtggagaaagagatgaattatccccaaagagaattaaagtggaggatggg
tttccagatttccaggattctgtgcaaacactcttccagcaggctagagctaagagtgaa
gaacttgcagctcttagttcacagcagcctgaaaaggtgatggcaaagcagatggagttc
ctttgcaaccaagctggctatgagagactgcagcatgccgagaggaggttgtctgcaggg
ctttacaggcagagctcagaagagcacagtcctaacggcttgacttccgataactcagat
ggacaaggagaaagacctttgaatctccgaatgcctaatttacagaacagacaaccccat
cattttgtggtggatggggagctgagcagactttaccccagtgaggcaaagtcccactca
tcagggggtaggagaggtcaggtcagtggagccctggggataaaggaacaggatcttagg
gaagccgtatggatggaggcagagttggcacccagagactgctgttctttgctgacatgg
cacaatcaaggactccagcgtggccatctctatggctcatcatgttccctgcttctgtgg
gccatgagtctcctcattactgccattaccagatcaatgagtaatttgcagattagtctg
aaaagaattgagaatgctggtgagcgttctttacaggtcacacctacacagtatccctcc
cctaaaagagaactggctgccaggaaagtggaccctggtaacaacaacaacaataaaaac
cagtggggtgaatcaccaagggtaggagcagatggtagagactgtgaagtgggaggcatc
tgtggggcttctggaaaattcacataa

>gi568815596f:190559177_190790330|GENSCAN_predicted_peptide_3|110_aa
MQQEDALLEAQTRPSPDTEPADTLISKIQKGFERNSKEIKRKSSTSFQEFFPTGVTQDMC
DNMYEMLSIGEAQPRLYAQGFYSGLPLWRAQYPRLSPTQKQVTSLSLRNF

>gi568815596f:190559177_190790330|GENSCAN_predicted_CDS_3|333_bp
atgcagcaggaagatgccctcttggaagcacagacaaggccctcaccagacactgaacct
gctgacacattgatctccaaaattcaaaagggttttgagagaaacagcaaagaaatcaag
aggaaatcaagcacaagcttccaagagttctttcccactggggtcacccaggacatgtgt
gacaacatgtatgaaatgctgtctatcggggaagctcagccgagactctatgcccagggt
ttttattcagggctgcccctgtggagagctcagtacccaagactgtctcccactcagaaa
caggtcacaagtctgagcctccgaaacttctga

>gi568815596f:190559177_190790330|GENSCAN_predicted_peptide_4|37_aa
MEQLLLHSTEVSQQISDKSSDTFVLPPSSRGDSVKDK

>gi568815596f:190559177_190790330|GENSCAN_predicted_CDS_4|114_bp
atggagcagttgctgcttcacagcactgaggtgagtcagcagatcagtgacaagagctct
gacacatttgttctacctccttcatctcggggagacagcgtgaaggataaatga

>gi568815596f:190559177_190790330|GENSCAN_predicted_peptide_5|286_aa
MKSDPGSKLFSNGVALISYNKTDPDSQCVRNWWVLGLTDFKNEATDPRGVKLQTFAVSVT
ALKAVRLELFVPPGGLVASLASGLKLQTFPTQEPRWLHLVDPAPGLQIDGAACQSRVVRP
HSSALGWSMGLGAMEQGVALVKEARAAQEPTEGVGGSGMAGCRSRALPRGKAAKARKYRM
AVCFNSNTYFWHIPGSCLDFSGSNLKPQSPLPRLIWGLCSIIKPLVKDLGYSGTFILNHC
LGLAAQRTWCFSMAENRCVGQVCCNQQKAERESSLLISPENDPTTV

>gi568815596f:190559177_190790330|GENSCAN_predicted_CDS_5|861_bp
atgaagtctgacccaggctctaaactctttagcaatggggttgctctaattagctataat
aagactgatcctgactcacagtgtgtccggaattggtgggttcttggtctcactgacttc
aagaatgaagccacggatcctcgcggagtgaagctgcagaccttcgcggtgagtgttaca
gctcttaaggcggtgcgtctggagttgttcgttcctcccggtgggctggtggcctcgctg
gcttcaggattgaagctgcagaccttcccgactcaggagcccagatggcttcacctcgtg
gatcccgcaccggggctgcagatagatggagctgcctgccagtcccgcgttgttcgcccg
cactcctcagcccttgggtggtcgatgggactgggcgccatggagcagggggtggcgctc
gtcaaggaggctcgggccgcacaggagcccacggagggggtcggaggctcaggcatggcg
ggctgcaggtcccgagccctgccccgcgggaaggcagctaaggcccgtaaatatagaatg
gctgtttgctttaattctaacacatacttttggcacattccaggttcttgcttagacttc
tcaggctctaatttgaaaccccagagtcctttacccagactgatctggggcctatgttcc
atcatcaaaccactggtaaaagaccttggttattctgggactttcatcctcaaccactgc
ctggggctggctgcccagaggacatggtgcttttccatggctgaaaatagatgtgtgggg
caggtttgctgcaaccagcagaaagcagagagagaaagcagcttgctgatctcacctgaa
aacgaccctacaaccgtgtag

>gi568815596f:190559177_190790330|GENSCAN_predicted_peptide_6|333_aa
MEMKMMTVNVERKLYVLIGQDFPLSLRVPSETKLPEERSGSNICCSPIFAVLQHPLLIPR
QTGSGVELWQTPTDLQLRRRKSCHLQKASRRQEITKIRAELKEIETQKTLQKVNESRSWF
FEKINKIDRPLAGLIKKKREKNQIDTIKNGKGHITTDPTETQTTIREYYKHLYANKLENL
EEMDKFLDTYTLPRLNQEEVESFTRPITGSEIEAIINSLPTKKSPGPEGFTAEFHQRSKE
ELVPFLLKLFQSIGKEGILPHSFYEASIILISKPGTDTTKKENFRPISLMNSDAKILSKI
LANQIQQHIKILSTMIKWASSLACKAGSTYANQ

>gi568815596f:190559177_190790330|GENSCAN_predicted_CDS_6|1002_bp
atggaaatgaaaatgatgacagtgaatgtggaaagaaagttgtatgtgttgattggacag
gactttccactgagtctccgggtaccctctgagacaaaacttccagaggaacgatcaggc
agcaacatttgctgttcaccaatattcgctgttctgcagcatccgctgctgatacccagg
caaacagggtctggagtggaactctggcaaactccaacagacctgcagctgaggagaagg
aagagctgtcaccttcaaaaagctagcagaaggcaagaaataactaagatcagagcagaa
ctgaaggagatagagacacaaaaaacccttcaaaaagtcaatgaatccaggagctggttt
tttgaaaagatcaacaaaattgatagaccactagcaggactaataaagaagaaaagagag
aagaatcaaatagacacaataaaaaatggtaaagggcatatcaccactgatcccacagaa
acacaaactaccatcagagaatactataaacacctctatgcaaataaacttgaaaatcta
gaagaaatggataaattcctcgacacatacacactcccaagactaaaccaggaagaagtt
gaatcttttactagaccaataacaggctctgaaattgaggcaataattaatagcttacca
accaaaaaaagtccaggaccagaaggattcacagccgaattccaccagaggtccaaggag
gagctggtaccattccttctgaaactattccaatcaataggaaaagagggaatcctccct
cactcattttatgaggccagcattatcctgatatcaaagcctggcacagacacaacaaaa
aaagagaattttagaccaatatccctgatgaacagcgatgcaaaaatcctcagtaaaata
ctggcaaaccaaatccagcagcacatcaaaatcttatccaccatgatcaagtgggcttca
tccctggcatgcaaggctggttcaacatatgcaaatcaataa