GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:21:16

Sequence gi568815592f:21494535_21695956 : 201422 bp : 43.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   1728   1595  134  1  2   69   89    81 0.123   6.66
 1.03 Intr -   8017   7908  110  0  2   -6  100    56 0.007  -2.67
 1.02 Intr -  17889  17746  144  2  0   60   81    62 0.076   2.10
 1.01 Init -  24254  24238   17  2  2  104  119    -3 0.753   4.36
 1.00 Prom -  25769  25730   40                              -3.96

 2.00 Prom +  25926  25965   40                              -4.06
 2.01 Init +  29000  29142  143  1  2   65   94   154 0.995  13.38
 2.02 Intr +  35013  35125  113  0  2   77   21    41 0.042  -3.68
 2.03 Intr +  35514  35744  231  1  0  117   54    92 0.062   6.44
 2.04 Term +  47546  47565   20  0  2  115   44    40 0.163   0.78
 2.05 PlyA +  47682  47687    6                               1.05

 3.04 PlyA -  47737  47732    6                               1.05
 3.03 Term -  48702  48590  113  1  2   96   47    91 0.354   4.52
 3.02 Intr -  57886  57686  201  2  0   44   40   164 0.242   6.46
 3.01 Init -  61699  61651   49  1  1   86   58    48 0.382   0.71
 3.00 Prom -  83252  83213   40                              -1.96

 4.00 Prom +  85637  85676   40                              -6.26
 4.01 Sngl + 100001 101425 1425  1  0   91   49  2403 0.999 232.58
 4.02 PlyA + 104057 104062    6                               1.05

 5.00 Prom + 105959 105998   40                              -6.26
 5.01 Init + 107594 107659   66  1  0   97   -9    89 0.857   1.21
 5.02 Term + 107698 107850  153  0  0   57   55   163 0.822   7.82
 5.03 PlyA + 107907 107912    6                               1.05

 6.04 PlyA - 109237 109232    6                               1.05
 6.03 Term - 115535 115371  165  2  0   49   55    68 0.179  -2.48
 6.02 Intr - 120549 120263  287  1  2   13   77   182 0.473   6.66
 6.01 Init - 130004 129941   64  2  1   83   90    63 0.677   7.31
 6.00 Prom - 136077 136038   40                              -5.46

 7.05 PlyA - 136948 136943    6                               1.05
 7.04 Term - 138168 138067  102  0  0   92   54    39 0.185  -0.82
 7.03 Intr - 156250 156203   48  1  0   70  116    51 0.402   4.98
 7.02 Intr - 170020 169935   86  2  2   35   59   121 0.032   3.44
 7.01 Init - 191350 191272   79  1  1   52   81   117 0.437   6.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  35558  35744  187  1  1   95   54   118 0.808   8.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:21494535_21695956|GENSCAN_predicted_peptide_1|135_aa
MPRDHCSVFVNQSLEDTMHAFDKGLITPSRSYKVRDGSVKPGNKGAGWKRAVGWELTKLY
PLCFQKQNWKYRQTALKAPGLPQEVISSEEALSHFQREVHVGSFSKLVCPKATAKQDKCA
KQCAKDQETQYARCT

>gi568815592f:21494535_21695956|GENSCAN_predicted_CDS_1|405_bp
atgcccagggaccactgctccgtctttgtaaaccagtctttggaagacactatgcatgct
tttgacaaagggctcatcactcccagtaggagttacaaagttagagatggcagtgtaaaa
cctggaaacaaaggagctggttggaaacgggcagtaggctgggagctgacgaaactttat
cccttgtgtttccaaaaacagaactggaaatatcgacaaacagcactgaaggctcctggt
ctaccacaggaggtgatctctagtgaagaagctttgagccattttcaaagagaagtacac
gttggaagcttcagcaaacttgtttgtcctaaagctacggcaaagcaggataagtgtgca
aagcaatgtgcaaaggaccaggagactcagtatgcacggtgcacg

>gi568815592f:21494535_21695956|GENSCAN_predicted_peptide_2|168_aa
MVGDQPCSIRGGLVTSLRAVPAQLKIHAAKLEAIVYIQDASLLLAKQRAKRSSVNEIKLW
GKRLCLKSPEDSVHKGQGVGMSYRPLWVSWPSHFGLVHFQSERSTSKNGIRCDKWLGYGP
GDISLPAPAENVFEPKYEFCITENCKKRNRNNYHLLSVYNVLGLPEYD

>gi568815592f:21494535_21695956|GENSCAN_predicted_CDS_2|507_bp
atggtgggagaccagccgtgctccatcagaggcggtttggttacaagtctccgagcagta
cctgctcagctgaaaattcacgctgccaagttagaagccatcgtgtacattcaggatgca
tctctgctcctggctaaacaaagagctaagcgctcctctgttaatgagattaagctttgg
gggaagaggctttgcctaaagtccccagaggactcagtccacaaaggccaaggagttgga
atgtcatatcggcccttgtgggtctcctggcccagccactttgggcttgttcattttcag
agcgaaaggtctacttccaaaaatggcatcaggtgtgacaaatggctgggctatggccca
ggagacatcagccttccagctcctgcagaaaatgtgtttgagcccaaatatgaattctgt
ataacagagaactgcaagaagaggaatagaaacaattaccatttgctgagtgtctacaat
gtcctaggtcttcctgagtatgactga

>gi568815592f:21494535_21695956|GENSCAN_predicted_peptide_3|120_aa
MGFHHVGQAGLALLTSGLRDLQPAIPEPPTHSMGSCAAGASPTSTTPYSTVPSPIDHPRA
EKCERTAQDWQAAPPAAPVRDPLGTWMKLETIILSKLTQEQKTKHRIFSLISGNRTMRTR

>gi568815592f:21494535_21695956|GENSCAN_predicted_CDS_3|363_bp
atggggtttcaccatgttggccaggctggtctcgcactcctgacctcagggctcagggac
ctgcagcccgccatacctgagcctcccacccactccatgggctcctgtgcggccggagcc
tccccgacgagcaccaccccctactccacagtgcccagtcccatcgaccacccaagggct
gagaaatgcgagcgcacggcgcaggactggcaggcagctccacctgcagccccggtgcgg
gatccactagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaa
cagaaaactaaacaccgcatcttctcacttatcagtgggaaccgaacaatgagaacacgt
tga

>gi568815592f:21494535_21695956|GENSCAN_predicted_peptide_4|474_aa
MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGG
GGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAE
QAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFG
GLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGRSSAASSPAAGRSPADHRG
YASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESMSLG
SFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY

>gi568815592f:21494535_21695956|GENSCAN_predicted_CDS_4|1425_bp
atggtgcagcaaaccaacaatgccgagaacacggaagcgctgctggccggcgagagctcg
gactcgggcgccggcctcgagctgggaatcgcctcctcccccacgcccggctccaccgcc
tccacgggcggcaaggccgacgacccgagctggtgcaagaccccgagtgggcacatcaag
cgacccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaagacagcgacaagatccctttcattcgagaggcggagcggctgcgcctcaagcacatg
gctgactaccccgactacaagtaccggcccaggaagaaggtgaagtccggcaacgccaac
tccagctcctcggccgccgcctcctccaagccgggggagaagggagacaaggtcggtggc
agtggcgggggcggccatgggggcggcggcggcggcgggagcagcaacgcggggggagga
ggcggcggtgcgagtggcggcggcgccaactccaaaccggcgcagaaaaagagctgcggc
tccaaagtggcgggcggcgcgggcggtggggttagcaaaccgcacgccaagctcatcctg
gcaggcggcggcggcggcgggaaagcagcggctgccgccgccgcctccttcgccgccgaa
caggcgggggccgccgccctgctgcccctgggcgccgccgccgaccaccactcgctgtac
aaggcgcggactcccagcgcctcggcctccgcctcctcggcagcctcggcctccgcagcg
ctcgcggccccgggcaagcacctggcggagaagaaggtgaagcgcgtctacctgttcggc
ggcctgggcacgtcgtcgtcgcccgtgggcggcgtgggcgcgggagccgaccccagcgac
cccctgggcctgtacgaggaggagggcgcgggctgctcgcccgacgcgcccagcctgagc
ggccgcagcagcgccgcctcgtcccccgccgccggccgctcgcccgccgaccaccgcggc
tacgccagcctgcgcgccgcctcgcccgccccgtccagcgcgccctcgcacgcgtcctcc
tcggcctcgtcccactcctcctcttcctcctcctcgggctcctcgtcctccgacgacgag
ttcgaagacgacctgctcgacctgaaccccagctcaaactttgagagcatgtccctgggc
agcttcagttcgtcgtcggcgctcgaccgggacctggattttaacttcgagcccggctcc
ggctcgcacttcgagttcccggactactgcacgcccgaggtgagcgagatgatctcggga
gactggctcgagtccagcatctccaacctggttttcacctactga

>gi568815592f:21494535_21695956|GENSCAN_predicted_peptide_5|72_aa
MELRAEYLREKLQRDLAAEHVALLAVSAKFEGKPLLQRHRLVNACLAEALLRIHAFEQKT
LIPEQWARERQK

>gi568815592f:21494535_21695956|GENSCAN_predicted_CDS_5|219_bp
atggaactcagggccgaatacctcagggagaagctgcagcgggacctggcggcggagcat
gtggcgcttctggcggtgtcggccaagttcgaggggaagccgctgcttcagagacaccgc
ctggtgaacgcgtgcctagcagaagcgctcctgcgtatccatgcctttgaacagaaaacc
ctaatcccagagcagtgggcccgtgagcggcagaaatga

>gi568815592f:21494535_21695956|GENSCAN_predicted_peptide_6|171_aa
MEVNNNSTLVGCSYSLEKVVEASVGQQNGDALERLSVDAPLEKQDQNHCIPTKTTIKYNS
DGINDGSHEHQIGMLKLSSHIREKVHFVEGEALRQQQCDHLWEDRVTLGRFGADGTHRAL
AAFPRGRAGDLQLAMPEPPYPPPLGLWCCPSLSDEHRPLLHGAQSHQPPKD

>gi568815592f:21494535_21695956|GENSCAN_predicted_CDS_6|516_bp
atggaagtgaataacaacagcacgttagttggatgctcctactcactggagaaggtggtg
gaggccagtgtgggccagcaaaatggagatgcgttggagagactcagtgtggatgccccg
ttggagaaacaggatcaaaatcattgtataccaactaaaaccactatcaaatacaattca
gatgggatcaatgatgggtcccatgagcatcagatagggatgctgaagcttagcagccac
ataagagaaaaagtccactttgtggagggcgaagctctgagacagcagcagtgtgaccac
ctctgggaagacagggtgactttaggaaggtttggggctgatgggacacatagggcctta
gctgccttcccgcggggcagggctggggacctgcagctcgccatgcctgagcctccctac
ccccctccccttgggctctggtgctgcccgagcctctctgacgagcaccgccccctgctc
cacggcgcccagtcccatcaaccgcccaaggactga

>gi568815592f:21494535_21695956|GENSCAN_predicted_peptide_7|104_aa
MKLGWLACLLLTLCCVARFLTGHRTGIWTRTVLGSGVGDKEAAAGHAQGRGSGRKGNVLG
RTSDPSGYAFKAFSKSMLLKVWFVDQLPICRLTVTGMQGGQLQN

>gi568815592f:21494535_21695956|GENSCAN_predicted_CDS_7|315_bp
atgaagcttggctggcttgcctgcttgctgctcaccctctgctgtgtggcccgattccta
acaggccacagaacaggaatctggacgcgtacagtactgggcagtggggtcggagataaa
gaagcggccgccggccacgcgcagggccgcggctctggccgcaaaggaaacgtgctcgga
agaacatcggacccatcgggttatgctttcaaggctttctctaagtcgatgttactcaaa
gtctggtttgtggaccaactgccgatctgcagactgactgttactggaatgcagggaggt
caattgcaaaattga