Result of FASTA (omim) for pF1KB9422
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9422, 571 aa
  1>>>pF1KB9422 571 - 571 aa - 571 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.8479+/-0.000582; mu= -11.5254+/- 0.036
 mean_var=492.0398+/-102.595, 0's: 0 Z-trim(118.1): 95  B-trim: 96 in 2/54
 Lambda= 0.057819
 statistics sampled from 30657 (30750) to 30657 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.361), width:  16
 Scan time:  9.810

The best scores are:                                      opt bits E(85289)
NP_001008213 (OMIM: 137760,602432,606657,613435) o ( 577) 3596 315.3 3.5e-85
NP_001008212 (OMIM: 137760,602432,606657,613435) o ( 577) 3596 315.3 3.5e-85
NP_001008214 (OMIM: 137760,602432,606657,613435) o ( 577) 3596 315.3 3.5e-85
NP_068815 (OMIM: 137760,602432,606657,613435) opti ( 577) 3596 315.3 3.5e-85
NP_001308325 (OMIM: 300248,300291,300301,300584,30 ( 419)  495 56.5 2.1e-07
NP_003630 (OMIM: 300248,300291,300301,300584,30063 ( 419)  495 56.5 2.1e-07
NP_001093327 (OMIM: 300248,300291,300301,300584,30 ( 419)  495 56.5 2.1e-07
NP_001093326 (OMIM: 300248,300291,300301,300584,30 ( 487)  495 56.5 2.3e-07
NP_001308326 (OMIM: 300248,300291,300301,300584,30 ( 418)  493 56.3 2.3e-07


>>NP_001008213 (OMIM: 137760,602432,606657,613435) optin  (577 aa)
 initn: 2279 init1: 2279 opt: 3596  Z-score: 1650.3  bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)

               10        20        30        40        50        60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
              130       140       150       160       170       180

              190       200             210       220       230    
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
       :::::::::::::::::::::::::::::      :::::::::::::::::::::::::
NP_001 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
              370       380       390       400       410       420

          420       430       440       450       460       470    
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
              430       440       450       460       470       480

          480       490       500       510       520       530    
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
              490       500       510       520       530       540

          540       550       560       570 
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
       :::::::::::::::::::::::::::::::::::::
NP_001 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
              550       560       570       

>>NP_001008212 (OMIM: 137760,602432,606657,613435) optin  (577 aa)
 initn: 2279 init1: 2279 opt: 3596  Z-score: 1650.3  bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)

               10        20        30        40        50        60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
              130       140       150       160       170       180

              190       200             210       220       230    
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
       :::::::::::::::::::::::::::::      :::::::::::::::::::::::::
NP_001 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
              370       380       390       400       410       420

          420       430       440       450       460       470    
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
              430       440       450       460       470       480

          480       490       500       510       520       530    
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
              490       500       510       520       530       540

          540       550       560       570 
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
       :::::::::::::::::::::::::::::::::::::
NP_001 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
              550       560       570       

>>NP_001008214 (OMIM: 137760,602432,606657,613435) optin  (577 aa)
 initn: 2279 init1: 2279 opt: 3596  Z-score: 1650.3  bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)

               10        20        30        40        50        60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
              130       140       150       160       170       180

              190       200             210       220       230    
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
       :::::::::::::::::::::::::::::      :::::::::::::::::::::::::
NP_001 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
              370       380       390       400       410       420

          420       430       440       450       460       470    
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
              430       440       450       460       470       480

          480       490       500       510       520       530    
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
              490       500       510       520       530       540

          540       550       560       570 
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
       :::::::::::::::::::::::::::::::::::::
NP_001 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
              550       560       570       

>>NP_068815 (OMIM: 137760,602432,606657,613435) optineur  (577 aa)
 initn: 2279 init1: 2279 opt: 3596  Z-score: 1650.3  bits: 315.3 E(85289): 3.5e-85
Smith-Waterman score: 3596; 99.0% identity (99.0% similar) in 577 aa overlap (1-571:1-577)

               10        20        30        40        50        60
pF1KB9 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MSHQPLSCLTEKEDSPSESTGNGPPHLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 NNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALSHENEKLKEELGKLKGKSER
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLGIVSELQLKLNSSGSSEDSFVE
              130       140       150       160       170       180

              190       200             210       220       230    
pF1KB9 IRMAEGEAEGSVKEIKHSPGPTRTVSTGT------SRSADGAKNYFEHEELTVSQLLLCL
       :::::::::::::::::::::::::::::      :::::::::::::::::::::::::
NP_068 IRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSRSADGAKNYFEHEELTVSQLLLCL
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB9 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 REGNQKVERLEVALKEAKERVSDFEKKTSNRSEIETQTEGSTEKENDEEKGPETVGSEVE
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB9 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 ALNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSAIPSELNEKQELVYTNKK
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB9 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 LELQVESMLSEIKMEQAKTEDEKSKLTVLQMTHNKLLQEHNNALKTIEELTRKESEKVDR
              370       380       390       400       410       420

          420       430       440       450       460       470    
pF1KB9 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 AVLKELSEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTILRAQMEVYCSDFHAERA
              430       440       450       460       470       480

          480       490       500       510       520       530    
pF1KB9 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 AREKIHEEKEQLALQLAVLLKENDAFEDGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAE
              490       500       510       520       530       540

          540       550       560       570 
pF1KB9 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
       :::::::::::::::::::::::::::::::::::::
NP_068 DRDWRQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
              550       560       570       

>>NP_001308325 (OMIM: 300248,300291,300301,300584,300636  (419 aa)
 initn: 598 init1: 216 opt: 495  Z-score: 254.1  bits: 56.5 E(85289): 2.1e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:83-418)

         210       220       230       240         250       260   
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
                                     ...:. :.  :   ..::.. :   :.   
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
             60        70        80        90       100            

           270       280       290       300       310       320   
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
       .. ... : : . .. .  ..  . .. .  ... :::::. ::::....:  :    . 
NP_001 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
     110       120       130       140       150       160         

           330       340         350       360       370       380 
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
       :. . .:  ..   . :: .  ..:. : ... :..: .:. . ..::.  . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
     170       180       190       200        210       220        

             390       400       410       420       430       440 
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
        ::.....:.::..: .:.    .   ::.     :..:...:. ::.::..::  .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
      230       240           250       260       270       280    

             450       460       470       480       490       500 
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
       :.   ...  .::. .:.:: ..: .::.::: ::::. :.:: :  ::  : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
          290       300       310       320       330       340    

               510       520          530       540        550     
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
        . ..:  . .:..:: ...:..      ::: .  :   . :.  .. :   ::::   
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
          350       360        370       380       390       400   

         560       570 
pF1KB9 LPDIDTLQIHVMDCII
        ::.::::::::.:: 
NP_001 APDMDTLQIHVMECIE
           410         

>>NP_003630 (OMIM: 300248,300291,300301,300584,300636,30  (419 aa)
 initn: 598 init1: 216 opt: 495  Z-score: 254.1  bits: 56.5 E(85289): 2.1e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:83-418)

         210       220       230       240         250       260   
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
                                     ...:. :.  :   ..::.. :   :.   
NP_003 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
             60        70        80        90       100            

           270       280       290       300       310       320   
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
       .. ... : : . .. .  ..  . .. .  ... :::::. ::::....:  :    . 
NP_003 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
     110       120       130       140       150       160         

           330       340         350       360       370       380 
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
       :. . .:  ..   . :: .  ..:. : ... :..: .:. . ..::.  . .:: ::.
NP_003 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
     170       180       190       200        210       220        

             390       400       410       420       430       440 
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
        ::.....:.::..: .:.    .   ::.     :..:...:. ::.::..::  .:..
NP_003 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
      230       240           250       260       270       280    

             450       460       470       480       490       500 
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
       :.   ...  .::. .:.:: ..: .::.::: ::::. :.:: :  ::  : .: . ..
NP_003 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
          290       300       310       320       330       340    

               510       520          530       540        550     
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
        . ..:  . .:..:: ...:..      ::: .  :   . :.  .. :   ::::   
NP_003 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
          350       360        370       380       390       400   

         560       570 
pF1KB9 LPDIDTLQIHVMDCII
        ::.::::::::.:: 
NP_003 APDMDTLQIHVMECIE
           410         

>>NP_001093327 (OMIM: 300248,300291,300301,300584,300636  (419 aa)
 initn: 598 init1: 216 opt: 495  Z-score: 254.1  bits: 56.5 E(85289): 2.1e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:83-418)

         210       220       230       240         250       260   
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
                                     ...:. :.  :   ..::.. :   :.   
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
             60        70        80        90       100            

           270       280       290       300       310       320   
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
       .. ... : : . .. .  ..  . .. .  ... :::::. ::::....:  :    . 
NP_001 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
     110       120       130       140       150       160         

           330       340         350       360       370       380 
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
       :. . .:  ..   . :: .  ..:. : ... :..: .:. . ..::.  . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
     170       180       190       200        210       220        

             390       400       410       420       430       440 
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
        ::.....:.::..: .:.    .   ::.     :..:...:. ::.::..::  .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
      230       240           250       260       270       280    

             450       460       470       480       490       500 
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
       :.   ...  .::. .:.:: ..: .::.::: ::::. :.:: :  ::  : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
          290       300       310       320       330       340    

               510       520          530       540        550     
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
        . ..:  . .:..:: ...:..      ::: .  :   . :.  .. :   ::::   
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
          350       360        370       380       390       400   

         560       570 
pF1KB9 LPDIDTLQIHVMDCII
        ::.::::::::.:: 
NP_001 APDMDTLQIHVMECIE
           410         

>>NP_001093326 (OMIM: 300248,300291,300301,300584,300636  (487 aa)
 initn: 598 init1: 216 opt: 495  Z-score: 253.3  bits: 56.5 E(85289): 2.3e-07
Smith-Waterman score: 495; 30.4% identity (64.9% similar) in 345 aa overlap (236-570:151-486)

         210       220       230       240         250       260   
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
                                     ...:. :.  :   ..::.. :   :.   
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
              130       140       150       160       170          

           270       280       290       300       310       320   
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
       .. ... : : . .. .  ..  . .. .  ... :::::. ::::....:  :    . 
NP_001 EKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
       180       190       200       210       220       230       

           330       340         350       360       370       380 
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
       :. . .:  ..   . :: .  ..:. : ... :..: .:. . ..::.  . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
       240       250       260        270       280       290      

             390       400       410       420       430       440 
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
        ::.....:.::..: .:.    .   ::.     :..:...:. ::.::..::  .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
        300       310           320       330       340       350  

             450       460       470       480       490       500 
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
       :.   ...  .::. .:.:: ..: .::.::: ::::. :.:: :  ::  : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
            360       370       380       390       400       410  

               510       520          530       540        550     
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
        . ..:  . .:..:: ...:..      ::: .  :   . :.  .. :   ::::   
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
            420        430       440       450       460       470 

         560       570 
pF1KB9 LPDIDTLQIHVMDCII
        ::.::::::::.:: 
NP_001 APDMDTLQIHVMECIE
             480       

>>NP_001308326 (OMIM: 300248,300291,300301,300584,300636  (418 aa)
 initn: 598 init1: 216 opt: 493  Z-score: 253.2  bits: 56.3 E(85289): 2.3e-07
Smith-Waterman score: 493; 31.0% identity (64.9% similar) in 345 aa overlap (236-570:83-417)

         210       220       230       240         250       260   
pF1KB9 STGTSRSADGAKNYFEHEELTVSQLLLCLREGNQKVER--LEVALKEAKERVSDFEKKTS
                                     ...:. :.  :   ..::.. :   :.   
NP_001 RCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLV---ERLGL
             60        70        80        90       100            

           270       280       290       300       310       320   
pF1KB9 NRSEIETQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKR
       .. ... : : .  .: .. :  . .. .  ... :::::. ::::....:  :    . 
NP_001 EKLDLKRQKEQAL-REVEHLKRCQQMAEDKASVKAQVTSLLGELQESQSRLEAATKECQA
     110       120        130       140       150       160        

           330       340         350       360       370       380 
pF1KB9 LQEKCQALERKNSAIPSELN--EKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLT
       :. . .:  ..   . :: .  ..:. : ... :..: .:. . ..::.  . .:: ::.
NP_001 LEGRARAASEQARQLESEREALQQQHSVQVDQ-LRMQGQSVEAALRMERQAASEEKRKLA
      170       180       190       200        210       220       

             390       400       410       420       430       440 
pF1KB9 VLQMTHNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEM
        ::.....:.::..: .:.    .   ::.     :..:...:. ::.::..::  .:..
NP_001 QLQVAYHQLFQEYDNHIKS----SVVGSERKRGMQLEDLKQQLQQAEEALVAKQEVIDKL
       230       240           250       260       270       280   

             450       460       470       480       490       500 
pF1KB9 KQTIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
       :.   ...  .::. .:.:: ..: .::.::: ::::. :.:: :  ::  : .: . ..
NP_001 KEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKLK
           290       300       310       320       330       340   

               510       520          530       540        550     
pF1KB9 DGGRQS--LMEMQSRHGARTSDSD---QQAYLVQRGAEDRDWRQQ-RNIPIHSCPKCGEV
        . ..:  . .:..:: ...:..      ::: .  :   . :.  .. :   ::::   
NP_001 ASCQESARIEDMRKRH-VEVSQAPLPPAPAYLSSPLALPSQRRSPPEEPPDFCCPKCQYQ
           350        360       370       380       390       400  

         560       570 
pF1KB9 LPDIDTLQIHVMDCII
        ::.::::::::.:: 
NP_001 APDMDTLQIHVMECIE
            410        




571 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 23:17:33 2016 done: Thu Nov  3 23:17:34 2016
 Total Scan time:  9.810 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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