Result of FASTA (ccds) for pF1KB9339
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9339, 1264 aa
  1>>>pF1KB9339 1264 - 1264 aa - 1264 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.8457+/-0.00103; mu= -1.6815+/- 0.062
 mean_var=278.2838+/-56.325, 0's: 0 Z-trim(113.0): 61  B-trim: 408 in 1/53
 Lambda= 0.076883
 statistics sampled from 13616 (13676) to 13616 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.42), width:  16
 Scan time:  6.010

The best scores are:                                      opt bits E(32554)
CCDS78450.1 RAPGEF1 gene_id:2889|Hs108|chr9        (1094) 4267 487.5 7.7e-137
CCDS48048.1 RAPGEF1 gene_id:2889|Hs108|chr9        (1095) 4143 473.8 1.1e-132
CCDS48047.1 RAPGEF1 gene_id:2889|Hs108|chr9        (1077) 4138 473.2 1.5e-132
CCDS45320.1 RASGRF1 gene_id:5923|Hs108|chr15       (1257)  531 73.2 4.8e-12
CCDS10309.1 RASGRF1 gene_id:5923|Hs108|chr15       (1273)  529 73.0 5.7e-12
CCDS42065.1 RASGRF1 gene_id:5923|Hs108|chr15       ( 489)  510 70.6 1.1e-11


>>CCDS78450.1 RAPGEF1 gene_id:2889|Hs108|chr9             (1094 aa)
 initn: 4267 init1: 4267 opt: 4267  Z-score: 2570.1  bits: 487.5 E(32554): 7.7e-137
Smith-Waterman score: 6940; 86.6% identity (86.6% similar) in 1264 aa overlap (1-1264:1-1094)

               10        20        30        40        50        60
pF1KB9 MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PEKPVNKEATDRFLPEGYPLPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 PEKPVNKEATDRFLPEGYPLPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSLA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 PASKPDGPAELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPLPGIRVVDNSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 PASKPDGPAELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPLPGIRVVDNSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYGG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 ESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 ESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 PQQTAWNLSPLPESLGESGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTPPALPEKKRRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 PQQTAWNLSPLPESLGESGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTPPALPEKKRRS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 AASQTADGSGCRVSYERHPSQYDNISGEDLQSTAPIPSVPYAPFAAILPFQHGGSSAPVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 AASQTADGSGCRVSYERHPSQYDNISGEDLQSTAPIPSVPYAPFAAILPFQHGGSSAPVE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB9 FVGDFTAPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 FVGDFTAPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQKN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB9 KLLMEVYGFSDSFSGVDSVQELAPPPALPPKQRQLQASCAASSFSSVSHCVQQTKVAFTP
       :::::::::::::::::::::::::::::::::::                         
CCDS78 KLLMEVYGFSDSFSGVDSVQELAPPPALPPKQRQL-------------------------
              610       620       630                              

              670       680       690       700       710       720
pF1KB9 EDGSAAQGLSVSVSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVPPFLPPTSSSSP
                                                                   
CCDS78 ------------------------------------------------------------
                                                                   

              730       740       750       760       770       780
pF1KB9 HFPPAHQSQSSDLAVPTMAGPPPSTVDGPLSASQESSFHGNTVCLPSETSFTDSSENASE
                                                                   
CCDS78 ------------------------------------------------------------
                                                                   

              790       800       810       820       830       840
pF1KB9 EAGEGEYVNLYSSGQSSEELAPSRGEPPAGKDGHPRDPSAVSGVPGKDSRDGSERAPKSP
                                :::::::::::::::::::::::::::::::::::
CCDS78 -------------------------EPPAGKDGHPRDPSAVSGVPGKDSRDGSERAPKSP
                                  640       650       660       670

              850       860       870       880       890       900
pF1KB9 DALESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 DALESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLV
              680       690       700       710       720       730

              910       920       930       940       950       960
pF1KB9 LYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVE
              740       750       760       770       780       790

              970       980       990      1000      1010      1020
pF1KB9 LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAARP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAARP
              800       810       820       830       840       850

             1030      1040      1050      1060      1070      1080
pF1KB9 GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
              860       870       880       890       900       910

             1090      1100      1110      1120      1130      1140
pF1KB9 RSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 RSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEG
              920       930       940       950       960       970

             1150      1160      1170      1180      1190      1200
pF1KB9 LAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 LAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRW
              980       990      1000      1010      1020      1030

             1210      1220      1230      1240      1250      1260
pF1KB9 QQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 QQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDR
             1040      1050      1060      1070      1080      1090

           
pF1KB9 EEKT
       ::::
CCDS78 EEKT
           

>>CCDS48048.1 RAPGEF1 gene_id:2889|Hs108|chr9             (1095 aa)
 initn: 4143 init1: 4143 opt: 4143  Z-score: 2495.8  bits: 473.8 E(32554): 1.1e-132
Smith-Waterman score: 6816; 86.3% identity (86.3% similar) in 1246 aa overlap (19-1264:20-1095)

                10        20        30        40        50         
pF1KB9  MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVK
                          : :::::::::::::::::::::::::::::::::::::::
CCDS48 MGNAIEKQKPLKRSHLYPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVK
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB9 IPEKPVNKEATDRFLPEGYPLPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 IPEKPVNKEATDRFLPEGYPLPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB9 ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSL
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 ANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 ANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPS
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB9 SPASKPDGPAELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPLPGIRVVDNSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 SPASKPDGPAELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPLPGIRVVDNSP
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB9 PPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYG
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 GESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 GESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQ
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB9 IPQQTAWNLSPLPESLGESGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTPPALPEKKRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 IPQQTAWNLSPLPESLGESGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTPPALPEKKRR
              430       440       450       460       470       480

     480       490       500       510       520       530         
pF1KB9 SAASQTADGSGCRVSYERHPSQYDNISGEDLQSTAPIPSVPYAPFAAILPFQHGGSSAPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 SAASQTADGSGCRVSYERHPSQYDNISGEDLQSTAPIPSVPYAPFAAILPFQHGGSSAPV
              490       500       510       520       530       540

     540       550       560       570       580       590         
pF1KB9 EFVGDFTAPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 EFVGDFTAPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQK
              550       560       570       580       590       600

     600       610       620       630       640       650         
pF1KB9 NKLLMEVYGFSDSFSGVDSVQELAPPPALPPKQRQLQASCAASSFSSVSHCVQQTKVAFT
       ::::::::::::::::::::::::::::::::::::                        
CCDS48 NKLLMEVYGFSDSFSGVDSVQELAPPPALPPKQRQL------------------------
              610       620       630                              

     660       670       680       690       700       710         
pF1KB9 PEDGSAAQGLSVSVSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVPPFLPPTSSSS
                                                                   
CCDS48 ------------------------------------------------------------
                                                                   

     720       730       740       750       760       770         
pF1KB9 PHFPPAHQSQSSDLAVPTMAGPPPSTVDGPLSASQESSFHGNTVCLPSETSFTDSSENAS
                                                                   
CCDS48 ------------------------------------------------------------
                                                                   

     780       790       800       810       820       830         
pF1KB9 EEAGEGEYVNLYSSGQSSEELAPSRGEPPAGKDGHPRDPSAVSGVPGKDSRDGSERAPKS
                                 ::::::::::::::::::::::::::::::::::
CCDS48 --------------------------EPPAGKDGHPRDPSAVSGVPGKDSRDGSERAPKS
                                  640       650       660       670

     840       850       860       870       880       890         
pF1KB9 PDALESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PDALESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDL
              680       690       700       710       720       730

     900       910       920       930       940       950         
pF1KB9 VLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 VLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLV
              740       750       760       770       780       790

     960       970       980       990      1000      1010         
pF1KB9 ELTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 ELTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAAR
              800       810       820       830       840       850

    1020      1030      1040      1050      1060      1070         
pF1KB9 PGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYW
              860       870       880       890       900       910

    1080      1090      1100      1110      1120      1130         
pF1KB9 VRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 VRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSE
              920       930       940       950       960       970

    1140      1150      1160      1170      1180      1190         
pF1KB9 GLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 GLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKR
              980       990      1000      1010      1020      1030

    1200      1210      1220      1230      1240      1250         
pF1KB9 WQQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 WQQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTD
             1040      1050      1060      1070      1080      1090

    1260    
pF1KB9 REEKT
       :::::
CCDS48 REEKT
            

>>CCDS48047.1 RAPGEF1 gene_id:2889|Hs108|chr9             (1077 aa)
 initn: 4138 init1: 4138 opt: 4138  Z-score: 2492.9  bits: 473.2 E(32554): 1.5e-132
Smith-Waterman score: 6811; 86.3% identity (86.3% similar) in 1244 aa overlap (21-1264:4-1077)

               10        20        30        40        50        60
pF1KB9 MSGGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKI
                           ::::::::::::::::::::::::::::::::::::::::
CCDS48                  MDTDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVKI
                                10        20        30        40   

               70        80        90       100       110       120
pF1KB9 PEKPVNKEATDRFLPEGYPLPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PEKPVNKEATDRFLPEGYPLPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVSA
            50        60        70        80        90       100   

              130       140       150       160       170       180
pF1KB9 LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 LRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQNDPRIQHSSALSSCYSRVYQSLA
           110       120       130       140       150       160   

              190       200       210       220       230       240
pF1KB9 NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 NLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPSS
           170       180       190       200       210       220   

              250       260       270       280       290       300
pF1KB9 PASKPDGPAELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPLPGIRVVDNSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PASKPDGPAELPLTDREVEILNKTTGMSQSTELLPDATDEEVAPPKPPLPGIRVVDNSPP
           230       240       250       260       270       280   

              310       320       330       340       350       360
pF1KB9 PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYGG
           290       300       310       320       330       340   

              370       380       390       400       410       420
pF1KB9 ESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 ESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQI
           350       360       370       380       390       400   

              430       440       450       460       470       480
pF1KB9 PQQTAWNLSPLPESLGESGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTPPALPEKKRRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 PQQTAWNLSPLPESLGESGSPFLGPPFQLPLGGHPQPDGPLAPGQQTDTPPALPEKKRRS
           410       420       430       440       450       460   

              490       500       510       520       530       540
pF1KB9 AASQTADGSGCRVSYERHPSQYDNISGEDLQSTAPIPSVPYAPFAAILPFQHGGSSAPVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 AASQTADGSGCRVSYERHPSQYDNISGEDLQSTAPIPSVPYAPFAAILPFQHGGSSAPVE
           470       480       490       500       510       520   

              550       560       570       580       590       600
pF1KB9 FVGDFTAPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 FVGDFTAPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIYQQKN
           530       540       550       560       570       580   

              610       620       630       640       650       660
pF1KB9 KLLMEVYGFSDSFSGVDSVQELAPPPALPPKQRQLQASCAASSFSSVSHCVQQTKVAFTP
       :::::::::::::::::::::::::::::::::::                         
CCDS48 KLLMEVYGFSDSFSGVDSVQELAPPPALPPKQRQL-------------------------
           590       600       610                                 

              670       680       690       700       710       720
pF1KB9 EDGSAAQGLSVSVSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVPPFLPPTSSSSP
                                                                   
CCDS48 ------------------------------------------------------------
                                                                   

              730       740       750       760       770       780
pF1KB9 HFPPAHQSQSSDLAVPTMAGPPPSTVDGPLSASQESSFHGNTVCLPSETSFTDSSENASE
                                                                   
CCDS48 ------------------------------------------------------------
                                                                   

              790       800       810       820       830       840
pF1KB9 EAGEGEYVNLYSSGQSSEELAPSRGEPPAGKDGHPRDPSAVSGVPGKDSRDGSERAPKSP
                                :::::::::::::::::::::::::::::::::::
CCDS48 -------------------------EPPAGKDGHPRDPSAVSGVPGKDSRDGSERAPKSP
                               620       630       640       650   

              850       860       870       880       890       900
pF1KB9 DALESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 DALESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLV
           660       670       680       690       700       710   

              910       920       930       940       950       960
pF1KB9 LYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 LYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVE
           720       730       740       750       760       770   

              970       980       990      1000      1010      1020
pF1KB9 LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAARP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAARP
           780       790       800       810       820       830   

             1030      1040      1050      1060      1070      1080
pF1KB9 GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
           840       850       860       870       880       890   

             1090      1100      1110      1120      1130      1140
pF1KB9 RSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 RSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEG
           900       910       920       930       940       950   

             1150      1160      1170      1180      1190      1200
pF1KB9 LAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 LAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRW
           960       970       980       990      1000      1010   

             1210      1220      1230      1240      1250      1260
pF1KB9 QQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 QQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDR
          1020      1030      1040      1050      1060      1070   

           
pF1KB9 EEKT
       ::::
CCDS48 EEKT
           

>>CCDS45320.1 RASGRF1 gene_id:5923|Hs108|chr15            (1257 aa)
 initn: 386 init1: 175 opt: 531  Z-score: 329.7  bits: 73.2 E(32554): 4.8e-12
Smith-Waterman score: 542; 27.2% identity (58.3% similar) in 569 aa overlap (707-1251:722-1254)

        680       690       700       710       720       730      
pF1KB9 FLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVPPFLPPTSSSSPHFPPAHQSQSSDLAVP
                                     : :: :  :..:::      . .. .: .:
CCDS45 RSLELLFASGQNNKLLYGEPPKSPRATRKFSSPPPLSITKTSSPS-----RRRKLSLNIP
             700       710       720       730            740      

        740       750       760       770       780       790      
pF1KB9 TMAGPPPSTVDGPLSASQESSFHGNTVCLPSETSFTDSSENASEEAGEGEYVNLYSSGQS
        ..:   ...:  :.: . .: .: :    . . :. .. ..:.         :: :.. 
CCDS45 IITGG--KALD--LAALSCNS-NGYTSMYSAMSPFSKATLDTSK---------LYVSSSF
        750           760        770       780                790  

        800       810       820                   830         840  
pF1KB9 SEELAPSRGEPPAGKDGHPRDPSAVS------------GVPGKDSRDG-SERAP-KSPDA
       .... :..:.    :   :.::::.:             .  ..: :: .: .: ::: .
CCDS45 TNKI-PDEGDTTPEK---PEDPSALSKQSSEVSMREESDIDQNQSDDGDTETSPTKSPTT
             800          810       820       830       840        

            850       860       870       880       890       900  
pF1KB9 LESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLY
        .:.....  .:. :...:. .   . ..  ..   . ..:.  . . ...    .   :
CCDS45 PKSVKNKNS-SEFPLFSYNNGVVMTSCRELDNNRSALSAASAFAIATAGANEGTPNKEKY
      850        860       870       880       890       900       

            910       920       930       940       950         960
pF1KB9 CEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDEL-C-LVE
        .  :..     . ..  :..  :    .   ..... :::..     .. ::: : .. 
CCDS45 RRMSLASAGFPPDQRNGDKEFVIRRAATNRVLNVLRHWVSKHS--QDFETNDELKCKVIG
       910       920       930       940       950         960     

              970       980       990      1000      1010      1020
pF1KB9 LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAARP
       . ::...   ::. .   ..  .. :.: ..  :  :..  :.  :.     :.:: :.:
CCDS45 FLEEVMHD-PELLTQER-KAAANIIRTLTQE--DPGDNQITLEEITQ----MAEGVKAEP
         970        980        990        1000          1010       

             1030      1040      1050        1060      1070        
pF1KB9 GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLL--WAKEQNEEKSPNLTQFTEHFNNMSY
         ...  . ::::::::::  .: ::   : .   : : ...:..: . . :.:::..: 
CCDS45 --FENHSALEIAEQLTLLDHLVFKKIPYEEFFGQGWMKLEKNERTPYIMKTTKHFNDISN
        1020      1030      1040      1050      1060      1070     

     1080      1090      1100      1110      1120      1130        
pF1KB9 WVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLE--W---
        . : :. .:  . :   . :.. .    : :.:.:. : : :... . : ::.  :   
CCDS45 LIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITSSMNRSAIFRLKKTWLKV
        1080      1090      1100      1110      1120      1130     

          1140      1150      1160      1170      1180      1190   
pF1KB9 QKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYI-DG
       .:::.  . .   :..: . :.  : ::.. .:::.::::. : ::.:.. :.:.:  ::
CCDS45 SKQTKALIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDG
        1140      1150      1160      1170      1180      1190     

           1200      1210      1220      1230      1240      1250  
pF1KB9 KVNFSKRWQQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRN
        :::::  .  .:.  .: :::. : ....  . ... : :  . ::.:.: ::.:.:. 
CCDS45 LVNFSKMRMISHIIREIRQFQQTAYKIEHQAKVTQYLLDQSFVMDEESLYESSLRIEPKL
        1200      1210      1220      1230      1240      1250     

           1260    
pF1KB9 ITRRKTDREEKT
                   
CCDS45 PT          
                   

>>CCDS10309.1 RASGRF1 gene_id:5923|Hs108|chr15            (1273 aa)
 initn: 386 init1: 175 opt: 529  Z-score: 328.4  bits: 73.0 E(32554): 5.7e-12
Smith-Waterman score: 542; 27.2% identity (58.3% similar) in 569 aa overlap (707-1251:738-1270)

        680       690       700       710       720       730      
pF1KB9 FLSRHGSLPVPSYKSVFRSYSQDFVPHHQASVPPFLPPTSSSSPHFPPAHQSQSSDLAVP
                                     : :: :  :..:::      . .. .: .:
CCDS10 RSLELLFASGQNNKLLYGEPPKSPRATRKFSSPPPLSITKTSSPS-----RRRKLSLNIP
       710       720       730       740       750            760  

        740       750       760       770       780       790      
pF1KB9 TMAGPPPSTVDGPLSASQESSFHGNTVCLPSETSFTDSSENASEEAGEGEYVNLYSSGQS
        ..:   ...:  :.: . .: .: :    . . :. .. ..:.         :: :.. 
CCDS10 IITGG--KALD--LAALSCNS-NGYTSMYSAMSPFSKATLDTSK---------LYVSSSF
              770          780       790       800                 

        800       810       820                   830         840  
pF1KB9 SEELAPSRGEPPAGKDGHPRDPSAVS------------GVPGKDSRDG-SERAP-KSPDA
       .... :..:.    :   :.::::.:             .  ..: :: .: .: ::: .
CCDS10 TNKI-PDEGDTTPEK---PEDPSALSKQSSEVSMREESDIDQNQSDDGDTETSPTKSPTT
      810        820          830       840       850       860    

            850       860       870       880       890       900  
pF1KB9 LESAQSEEEVDELSLIDHNEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLY
        .:.....  .:. :...:. .   . ..  ..   . ..:.  . . ...    .   :
CCDS10 PKSVKNKNS-SEFPLFSYNNGVVMTSCRELDNNRSALSAASAFAIATAGANEGTPNKEKY
          870        880       890       900       910       920   

            910       920       930       940       950         960
pF1KB9 CEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLVRVVDEL-C-LVE
        .  :..     . ..  :..  :    .   ..... :::..     .. ::: : .. 
CCDS10 RRMSLASAGFPPDQRNGDKEFVIRRAATNRVLNVLRHWVSKHS--QDFETNDELKCKVIG
           930       940       950       960         970       980 

              970       980       990      1000      1010      1020
pF1KB9 LTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCATSSQPLAARGVAARP
       . ::...   ::. .   ..  .. :.: ..  :  :..  :.  :.     :.:: :.:
CCDS10 FLEEVMHD-PELLTQER-KAAANIIRTLTQE--DPGDNQITLEEITQ----MAEGVKAEP
              990       1000      1010        1020          1030   

             1030      1040      1050        1060      1070        
pF1KB9 GTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLL--WAKEQNEEKSPNLTQFTEHFNNMSY
         ...  . ::::::::::  .: ::   : .   : : ...:..: . . :.:::..: 
CCDS10 --FENHSALEIAEQLTLLDHLVFKKIPYEEFFGQGWMKLEKNERTPYIMKTTKHFNDISN
            1040      1050      1060      1070      1080      1090 

     1080      1090      1100      1110      1120      1130        
pF1KB9 WVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLE--W---
        . : :. .:  . :   . :.. .    : :.:.:. : : :... . : ::.  :   
CCDS10 LIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITSSMNRSAIFRLKKTWLKV
            1100      1110      1120      1130      1140      1150 

          1140      1150      1160      1170      1180      1190   
pF1KB9 QKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYI-DG
       .:::.  . .   :..: . :.  : ::.. .:::.::::. : ::.:.. :.:.:  ::
CCDS10 SKQTKALIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDG
            1160      1170      1180      1190      1200      1210 

           1200      1210      1220      1230      1240      1250  
pF1KB9 KVNFSKRWQQFNILDSMRCFQQAHYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRN
        :::::  .  .:.  .: :::. : ....  . ... : :  . ::.:.: ::.:.:. 
CCDS10 LVNFSKMRMISHIIREIRQFQQTAYKIEHQAKVTQYLLDQSFVMDEESLYESSLRIEPKL
            1220      1230      1240      1250      1260      1270 

           1260    
pF1KB9 ITRRKTDREEKT
                   
CCDS10 PT          
                   

>>CCDS42065.1 RASGRF1 gene_id:5923|Hs108|chr15            (489 aa)
 initn: 350 init1: 175 opt: 510  Z-score: 323.2  bits: 70.6 E(32554): 1.1e-11
Smith-Waterman score: 518; 28.0% identity (59.5% similar) in 486 aa overlap (790-1251:18-486)

     760       770       780       790       800       810         
pF1KB9 GNTVCLPSETSFTDSSENASEEAGEGEYVNLYSSGQSSEELAPSRGEPPAGKDGHPRDPS
                                     :: :.. .... :..:.    :   :.:::
CCDS42              MYSAMSPFSKATLDTSKLYVSSSFTNKI-PDEGDTTPEK---PEDPS
                            10        20         30           40   

     820                   830         840       850       860     
pF1KB9 AVS------------GVPGKDSRDG-SERAP-KSPDALESAQSEEEVDELSLIDHNEIMS
       :.:             .  ..: :: .: .: ::: . .:.....  .:. :...:. . 
CCDS42 ALSKQSSEVSMREESDIDQNQSDDGDTETSPTKSPTTPKSVKNKNS-SEFPLFSYNNGVV
            50        60        70        80         90       100  

         870       880       890       900       910       920     
pF1KB9 RLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFISPEELIKKLQY
         . ..  ..   . ..:.  . . ...    .   : .  :..     . ..  :..  
CCDS42 MTSCRELDNNRSALSAASAFAIATAGANEGTPNKEKYRRMSLASAGFPPDQRNGDKEFVI
            110       120       130       140       150       160  

         930       940       950         960       970       980   
pF1KB9 RYEKFSPFADTFKKRVSKNTFFVLVRVVDEL-C-LVELTEEILKLLMELVFRLVCNGELS
       :    .   ..... :::..     .. ::: : .. . ::...   ::. .   ..  .
CCDS42 RRAATNRVLNVLRHWVSKHS--QDFETNDELKCKVIGFLEEVMHD-PELLTQER-KAAAN
            170       180         190       200        210         

           990      1000      1010      1020      1030      1040   
pF1KB9 LARVLRKNILDKVDQKKLLRCATSSQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELF
       . :.: ..  :  :..  :.  :.     :.:: :.:  ...  . ::::::::::  .:
CCDS42 IIRTLTQE--DPGDNQITLEEITQ----MAEGVKAEP--FENHSALEIAEQLTLLDHLVF
      220         230       240             250       260       270

          1050        1060      1070      1080      1090      1100 
pF1KB9 YKIEIPEVLL--WAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFI
        ::   : .   : : ...:..: . . :.:::..:  . : :. .:  . :   . :..
CCDS42 KKIPYEEFFGQGWMKLEKNERTPYIMKTTKHFNDISNLIASEIIRNEDINARVSAIEKWV
              280       290       300       310       320       330

            1110      1120      1130           1140      1150      
pF1KB9 KIMKHLRKLNNFNSYLAILSALDSAPIRRLE--W---QKQTSEGLAEYCTLIDSSSSFRA
        .    : :.:.:. : : :... . : ::.  :   .:::.  . .   :..: . :. 
CCDS42 AVADICRCLHNYNAVLEITSSMNRSAIFRLKKTWLKVSKQTKALIDKLQKLVSSEGRFKN
              340       350       360       370       380       390

       1160      1170      1180      1190       1200      1210     
pF1KB9 YRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYI-DGKVNFSKRWQQFNILDSMRCFQQA
        : ::.. .:::.::::. : ::.:.. :.:.:  :: :::::  .  .:.  .: :::.
CCDS42 LREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDGLVNFSKMRMISHIIREIRQFQQT
              400       410       420       430       440       450

        1220      1230      1240      1250      1260    
pF1KB9 HYDMRRNDDIINFFNDFSDHLAEEALWELSLKIKPRNITRRKTDREEKT
        : ....  . ... : :  . ::.:.: ::.:.:.             
CCDS42 AYKIEHQAKVTQYLLDQSFVMDEESLYESSLRIEPKLPT          
              460       470       480                   




1264 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 23:09:05 2016 done: Thu Nov  3 23:09:06 2016
 Total Scan time:  6.010 Total Display time:  0.250

Function used was FASTA [36.3.4 Apr, 2011]
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