GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:08:48

Sequence gi568815595r:44346578_44555549 : 208972 bp : 43.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    798    837   40  2  1   68  111    61 0.586   6.76
 1.02 Intr +  11262  11299   38  1  2   78   59    21 0.166  -3.82
 1.03 Intr +  14788  14941  154  0  1   96  104    63 0.730   8.35
 1.04 Intr +  21014  21131  118  0  1    2   60   105 0.051  -1.38
 1.05 Intr +  46278  46400  123  0  0   95  110    44 0.669   7.00
 1.06 Intr +  49823  49920   98  2  2   71   92    61 0.684   4.45
 1.07 Intr +  63491  63631  141  0  0   59   75    42 0.049   0.32
 1.08 Intr +  69770  69860   91  0  1   84   53    21 0.022  -2.75
 1.09 Intr +  73891  74044  154  1  1   93   62    88 0.288   6.77
 1.10 Intr +  74064  74126   63  2  0   86   62    42 0.262   0.31
 1.11 Intr +  81464  81581  118  1  1   93  116    35 0.572   6.84
 1.12 Intr +  82489  82646  158  2  2   82   81    81 0.935   6.53
 1.13 Term +  82693  82857  165  0  0   60   43    65 0.650  -2.88
 1.14 PlyA +  82932  82937    6                               1.05

 2.06 PlyA -  85164  85159    6                               1.05
 2.05 Term - 102162  99998 2165  1  2   39   38   751 0.482  50.57
 2.04 Intr - 102874 102812   63  2  0  109   87    11 0.769   1.79
 2.03 Intr - 103046 102936  111  0  0  105  109    47 0.995   8.85
 2.02 Intr - 103996 103870  127  1  1   15  106    88 0.160   3.55
 2.01 Init - 108972 108544  429  0  0   72   96   425 0.963  35.96
 2.00 Prom - 111900 111861   40                              -4.76

 3.00 Prom + 117638 117677   40                              -3.86
 3.01 Init + 123636 123670   35  2  2   94   80    29 0.598   2.06
 3.02 Intr + 132005 132092   88  2  1   73  115    43 0.699   5.47
 3.03 Term + 142163 142204   42  1  0   74   45    61 0.039  -2.44
 3.04 PlyA + 145177 145182    6                               1.05

 4.02 PlyA - 145212 145207    6                               1.05
 4.01 Sngl - 154049 152568 1482  2  0   79   44  1047 0.516  94.91
 4.00 Prom - 167271 167232   40                              -6.06

 5.09 PlyA - 171966 171961    6                               1.05
 5.08 Term - 178356 178171  186  0  0   84   49   113 0.701   4.49
 5.07 Intr - 178800 178613  188  1  2   61   65    68 0.380   1.21
 5.06 Intr - 187910 187746  165  0  0   77  103    71 0.411   7.43
 5.05 Intr - 199455 199267  189  1  0   91   80    66 0.269   5.66
 5.04 Intr - 203983 203862  122  0  2   51   73    81 0.592   3.04
 5.03 Intr - 204500 204383  118  0  1   75   72    58 0.445   2.42
 5.02 Intr - 205612 205564   49  1  1   92   76     4 0.299  -2.15
 5.01 Init - 208632 208561   72  0  0   76   86    61 0.390   3.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 103990 103870  121  1  1   89  106    83 0.815  10.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:44346578_44555549|GENSCAN_predicted_peptide_1|486_aa
MGAVPEGLQQYSPVHPDFFGQHPVEREINENSLKRLSVYLENLQKPGFKSLKPTQLTFYV
RETDQSSSDGQEPFSTSEAKRMPDRPIKWDKSYYSFTGFKDPDEDLEQVSRVETTLTSWL
DNNGKSAVKKLKNSLPLRKELDRLKDELSHQLQLSDIRWQRSWGIAHRCSQLHSLSRLAQ
QNLETLKKAKASLENSAQASLEQTKQIKSVPWRLMGPKAAGSSVGDHGPGNLPPTGQGHR
WGHAGPGSMAQHQAITKANSSPQGPGTGVPDVLEVHPDDAFHLELLRYNLEPPSTCSGTL
VGLLQQLLLKPGHSVCPGQDALLYPRGFLQPSTSLIKEGQTDWASSSNPKAAPLTRPIFS
TSHQTANRLPRPRNLSNLEGTESRDTPCCCLRESGPRSTGPVPADARSPLLLPDTSILRF
PLPGPPRKRGPQPLPPAPELSYIYDLSKNVMPFSPQKVILQAVIVTQGVPHGVLTGLQPS
TNRGLV

>gi568815595r:44346578_44555549|GENSCAN_predicted_CDS_1|1461_bp
atgggggctgtccctgaaggcttgcagcagtacagcccagtacatccagatttctttgga
cagcaccccgtagaaagggaaatcaatgaaaattctcttaaaaggttaagtgtctaccta
gaaaacctccagaaaccaggcttcaagtctttgaaaccaactcagcttacattttatgta
agagaaacagaccagagttcctccgatggccaggaaccttttagtacttccgaagctaaa
aggatgcctgacaggcccatcaaatgggacaagtcttattactcctttactggattcaag
gaccctgatgaagaccttgaacaagtctcgagagtggaaacaactctcacatcctggtta
gataacaatgggaaaagtgctgttaaaaagctaaagaacagtttgccacttagaaaagaa
ctagatcgtttaaaagatgaactgtctcatcaattgcaactctcagatatcaggtggcag
aggagctggggcatcgcccaccgctgtagccagctgcatagtttaagccgcttagcacag
cagaatttggaaacacttaaaaaagcaaaagcttccctggagaattctgcccaggcttcc
ctggagcaaaccaagcagatcaaatcagttccatggagactgatgggccccaaggctgca
ggctcctctgtaggggaccatggtcctggcaacctcccacccacaggccaaggtcaccga
tggggacatgcaggtccagggagcatggctcagcatcaggccatcactaaagcaaactcc
agcccacagggacctggcacaggtgttcctgatgtacttgaagtccatcctgatgacgca
tttcacctggagctgctccggtacaacttggagccacctagcacctgttcagggacacta
gtggggcttctccagcagctcctcctcaaaccaggtcactctgtgtgcccaggccaggat
gcactcctgtacccccgaggcttcctccagccctcaaccagcctgatcaaggagggccag
acagactgggcatccagttccaatccaaaggctgcccctttgaccaggcccatcttctcc
acctcacatcagacagccaatcggctgcccagacctcgaaacctcagtaacctagaaggc
acggagtccagggacaccccctgctgctgcctaagagaaagtggcccaagaagcactggc
ccggtgcctgctgatgccaggagccctctgctactgcctgacacaagcatcctgcgcttc
cccctcccaggccctccccgaaagcgtgggccacagccactcccaccagccccagagctt
tcctacatttatgatttgtccaaaaatgtgatgcccttcagcccccagaaggtcatcctc
caggctgtgatcgtcacacagggggtcccacatggggtcctcacaggccttcaacccagc
acaaatcgtggcctggtttga

>gi568815595r:44346578_44555549|GENSCAN_predicted_peptide_2|964_aa
MPPGRWHAAYPAQAQSSRERGRLQTVKKEEEDESYTPVQAARPQTLNRPGQELFRQLFRQ
LRYHESSGPLETLSRLRELCRWWLRPDVLSKAQILELLVLEQFLSILPGELRVWVQLHNP
ESGEEAVALLEELQRDLDGTSWRETMTFKDVEVTFSQDEWGWLDSAQRNLYRDVMLENYR
NMASLVGPFTKPALISWLEAREPWGLNMQAAQPKGNPVAAPTGQLHHWEFTPLFAGRKIF
NSVGDDLQSKTNKFILNQEPLEEAETLAVSSGCPATSVSEGIGLRESFQQKSRQKDQCEN
PIQVRVKKEETNFSHRTGKDSEVSGSNSLDLKHVTYLRVSGRKESLKHGCGKHFRMSSHH
YDYKKYGKGLRHMIGGFSLHQRIHSGLKGNKKDVCGKDFSLSSHHQRGQSLHTVGVSFKC
SDCGRTFSHSSHLAYHQRLHTQEKAFKCRVCGKAFRWSSNCARHEKIHTGVKPYKCDLCE
KAFRRLSAYRLHRETHAKKKFLELNQYRAALTYSSGFDHHLGDQSGEKLFDCSQCRKSFH
CKSYVLEHQRIHTQEKPYKCTKCRKTFRWRSNFTRHMRLHEEEKFYKQDECREGFRQSPD
CSQPQGAPAVEKTFLCQQCGKTFTRKKTLVDHQRIHTGEKPYQCSDCGKDFAYRSAFIVH
KKKHAMKRKPEGGPSFSQDTVFQVPQSSHSKEEPYKCSQCGKAFRNHSFLLIHQRVHTGE
KPYKCRECGKAFRWSSNLYRHQRIHSLQKQYDCHESEKTPNVEPKILTGEKRFWCQECGK
TFTRKRTLLDHKGIHSGEKRYKCNLCGKSYDRNYRLVNHQRIHSTERPFKCQWCGKEFIG
RHTLSSHQRKHTRAAQAERSPPARSSSQDTKLRLQKLKPSEEMPLEDCKEACSQSSRLTG
LQDISIGKKCHKCSICGKTFNKSSQLISHKRFHTRERPFKCSKCGKTFRWSSNLARHMKN
HIRD

>gi568815595r:44346578_44555549|GENSCAN_predicted_CDS_2|2895_bp
atgcctccaggcaggtggcatgctgcctatccagctcaggcccagtcttcgagggagcga
gggcggcttcagacagtaaagaaggaagaagaggatgaaagctatactccagtgcaggct
gccaggccacagactctcaaccgccctggccaggagctgttccgccagctcttcagacag
cttcgctaccatgagtcttcagggcccctagaaactctgagccggctccgggaactctgt
cgctggtggctgaggcctgacgttctctccaaggcacagatcctagagctgctggtgctg
gaacagttcctgagcatcctgcctggggagctccgggtttgggtgcagcttcataaccct
gagagtggcgaggaggctgtggccttgctggaggagctgcagagggaccttgatgggaca
tcctggagggagaccatgactttcaaggatgtggaggtgaccttctcccaggacgagtgg
gggtggctggactctgctcagaggaacctgtacagggatgtgatgctggagaattatagg
aacatggcttccctggtgggaccattcaccaaacctgctctgatctcctggttggaagca
agggagccatggggcctgaacatgcaggcagctcagcctaaggggaatccagttgctgct
cctacaggtcagttacatcactgggaatttactccattgtttgctggaaggaagatcttt
aacagtgttggagatgacctccagagtaaaacaaacaaattcatcttaaatcaggaacct
ttggaagaagcagaaaccttagctgtgtcatcaggatgtcctgcgacaagtgtttctgag
ggaattgggctcagagaatcttttcaacagaagagcaggcagaaggatcaatgtgaaaat
cccatacaagtaagagttaagaaagaagagaccaatttcagtcacaggacaggaaaagac
tctgaagtatcaggaagtaatagtcttgacttaaaacatgttacatatttgagagtttct
ggaagaaaggaatcccttaaacatggctgtggcaaacacttcagaatgagttcacaccac
tatgactacaagaaatatgggaaggggctcagacacatgattgggggcttcagcctacat
cagagaattcatagtggactgaaagggaacaaaaaggacgtgtgtggaaaagacttcagc
cttagctctcatcaccaacgtgggcagagtcttcacacagtgggagtgtcatttaagtgc
agtgactgtggaaggactttcagtcatagctcccatcttgcgtatcatcagagacttcac
actcaagagaaagcatttaaatgtagggtgtgtgggaaagccttccggtggagttccaac
tgtgcgcggcatgagaaaattcacactggagtgaagccttataaatgcgatttatgtgag
aaagctttccgacgcctgtcagcctaccgtctgcaccgagaaacccatgctaagaagaaa
tttcttgaattgaatcagtatagggcagctctcacctacagctcagggtttgatcatcat
ttgggagaccaaagtggggagaaactctttgactgcagccagtgcaggaaatccttccac
tgtaagtcatatgttcttgaacatcaaaggattcacacccaggagaagccctataaatgt
accaaatgtaggaaaacctttagatggagatcaaactttactcgtcatatgaggttgcat
gaggaggaaaaattctacaaacaagatgaatgtcgtgaaggcttcaggcaatctcctgac
tgcagtcagccccagggtgctcccgctgtggagaaaacatttctgtgtcagcagtgtggg
aaaacttttactagaaagaaaactctcgttgaccaccagagaattcacacaggtgagaaa
ccttaccagtgtagcgattgtgggaaggactttgcctataggtcagcctttattgttcat
aagaagaagcatgccatgaaaagaaaacctgagggcgggccatcttttagtcaggacaca
gtgttccaggttcctcagagcagtcactccaaagaggagccctacaaatgcagccagtgt
ggcaaggccttccgcaatcactcattcctcctcatccatcagagagttcacactggagag
aagccatataagtgcagggagtgtgggaaagccttcagatggagttccaatctctaccga
catcagaggattcactctcttcaaaaacagtatgattgccatgaaagtgaaaagactcca
aatgtggagccaaaaatcctcactggtgagaaacgtttttggtgtcaagaatgtgggaaa
acctttacacgtaaaagaacccttttagatcataagggaatacacagtggagagaagcgc
tataaatgtaatctatgtgggaaatcttatgatagaaactatcgccttgttaaccatcag
aggatccactctacagagagacctttcaaatgtcagtggtgtgggaaagagttcattggg
agacataccctttccagtcaccagaggaaacacaccagagcagcacaggctgaacgtagc
ccgcctgcacggtcttcctctcaggacacaaagttgagattacagaagctaaaaccaagt
gaagagatgcccctcgaagactgcaaagaagcttgcagccagagctccaggctcactgga
ctccaggacataagcattgggaaaaagtgccacaaatgcagcatatgtgggaaaactttt
aacaagagttcacaactcattagccacaagagatttcatactcgagagaggcccttcaaa
tgcagcaagtgtggaaagaccttcaggtggtcttcgaacctggctcggcatatgaaaaac
catattagagattag

>gi568815595r:44346578_44555549|GENSCAN_predicted_peptide_3|54_aa
MPGVQGHSYTANHQRWKQRIDPEHQEDGDKVIEKQMAHSNKLQGEKNYMWYIHI

>gi568815595r:44346578_44555549|GENSCAN_predicted_CDS_3|165_bp
atgcctggcgtccaaggacactcctacacagccaatcaccaaagatggaaacagagaata
gatcctgaacaccaggaagatggtgacaaggtgatagagaaacagatggcacattcaaac
aagttgcagggtgagaaaaactacatgtggtacatccacatctga

>gi568815595r:44346578_44555549|GENSCAN_predicted_peptide_4|493_aa
MMESSELTPKQEIFKGSESSNSTSGGLFGVVPGGTETGDVCEDTFKELEGQPSNEEGSRL
ESDFLEIIDEDKKKSTKDRYEEYKEVEEHPPLSSSPVEHEGVLKGQKSYRCDECGKAFYW
SSHLIGHRRIHTGEKPYECNECGKTFRQTSQLIVHLRTHTGEKPYECSECGKAYRHSSHL
IQHQRLHNGEKPYKCNECAKAFNQSSKLFDHQRTHTGEKPYECKECGAAFSRSKNLVRHQ
FLHTGKKPYKCNECGRAFCSNRNLIDHQRTHTGEKPYKCNECGKAFSRSKCLIRHQSLHT
GEKPYKCSECGKAFNQISQLVEHERIHTGEKPFKCSECGKAFGLSKCLIRHQRLHTSEKP
YKCNECGKSFNQNSYLIIHQRIHTGEKPYECNECGKVFSYNSSLMVHQRTHTGEKPYKCN
SCGKAFSDSSQLTVHQRVHTGEKNLMNVLSVGKPLVSVPLLITTSELMLERSPQVWLGHL
LKAWFSETDSKDL

>gi568815595r:44346578_44555549|GENSCAN_predicted_CDS_4|1482_bp
atgatggagagttcagagctgactccgaagcaggaaatttttaaaggatcagagtcatct
aatagcacatcagggggactctttggggtggttcctgggggaacagagactggagatgtt
tgtgaagataccttcaaagagttagaaggacaaccctcaaatgaagaagggagcagacta
gaaagtgatttcttggaaataatagatgaggataagaaaaaatccacaaaagacagatat
gaggaatataaggaagttgaggaacatccacctctgtcttccagtcctgttgaacatgaa
ggagttttaaagggacagaaatcctatcgatgtgatgaatgtggcaaagctttttattgg
agttcgcacctcattggtcatcggagaatccacactggagagaaaccctatgagtgtaat
gagtgtgggaagaccttcaggcaaacctcccagctcattgttcatctcagaacccacaca
ggggaaaagccctatgaatgcagtgagtgtggaaaggcctataggcacagctcccatctc
attcaacaccagagactccataatggggagaaaccctataaatgtaatgaatgtgcaaaa
gcttttaatcagagctccaaactcttcgaccaccagagaacccatactggggagaaacct
tatgaatgtaaggagtgtggggcggcctttagtcggagtaaaaatcttgttcgacatcag
tttctgcacactggtaagaaaccttataagtgtaatgaatgtgggagagcattctgttcc
aatagaaatctcattgaccatcagagaacccacactggggagaagccttataaatgtaat
gaatgtggcaaagccttcagtcggagtaaatgtcttattcgacatcagagcctccacact
ggggaaaagccatacaaatgtagtgaatgtgggaaagccttcaatcagatctctcaactt
gttgaacatgagcgaattcatactggagaaaaaccatttaagtgtagtgagtgtggtaag
gcattcggtctgagtaaatgtcttattcggcaccagaggcttcacacaagtgaaaagccc
tataaatgcaatgagtgtggaaaatccttcaatcaaaactcatacctcattatacaccag
agaattcacactggtgagaaaccctatgaatgtaatgagtgtgggaaggtcttcagttat
aattctagtcttatggtacatcagagaacccatactggggaaaaaccctataaatgcaat
agttgtgggaaagcctttagtgacagctcacagcttactgtgcaccagagagtccacact
ggagagaaaaaccttatgaatgtattgagtgtgggaaagcctttagtcagcgttccactt
ttaatcaccaccagcgaactcatgctggagagaagccctcaggtctggctcggtcatctt
cttaaggcatggttttctgagacagacagcaaagacctttga

>gi568815595r:44346578_44555549|GENSCAN_predicted_peptide_5|362_aa
MAEPEAREASTSAPSGIPEVSFAKLSPLTLTLDVVVPLAGFQDLSQAIACGQAIWDPSMG
AVAPGCPHLPLVRILPHDDRAVTLMAKVHSFILEVSETKNPPEGTNSGHILSTMKGLSPS
KDGESIEHDCQQIIVQTYATQKDLLEVPLANPDPNLYTNGSSFVENGIQTAGYAIVSDVT
VLEMISIAAQKILWMEGPAATYPPDGSTEYIGLRLESSPIAHCPAPGLTNAQDRLEMDRL
WVLPLYMPSKVVNAMWFQDTADLAFEASGRKPHPFPSVHKITADMLSNLLLQALFPIQGM
SCNEAKIPGQAYLFELHLSSFVVFLSNRLFHKTLSPAVCLEQLSLCREVPFTTYVSTQIE
GY

>gi568815595r:44346578_44555549|GENSCAN_predicted_CDS_5|1089_bp
atggccgagccggaagcgagagaggcctcgacttccgccccctccgggatcccggaagtc
tcgtttgcgaagttgagtcccctgacactaactcttgatgtggttgttcccttagctgga
tttcaggacttgtctcaggcaattgcctgtgggcaagccatctgggaccccagcatggga
gctgtggccccaggctgcccccacttgccattggtacggattctccctcatgatgacaga
gctgtgacactcatggcgaaggtccacagcttcattcttgaagtcagtgagaccaagaac
ccaccagaaggaaccaactctggacacatcttgtcaaccatgaagggactatcgccaagc
aaggatggggaatcaatcgagcatgactgccaacaaattatagtccagacttatgccacc
caaaaggatctcttagaagtccccttagctaatcctgaccctaacctatataccaacgga
agttcatttgtggagaatgggatacaaacagcaggttatgccatagttagtgatgtaaca
gtacttgaaatgatcagtatagctgcccaaaagatactgtggatggaagggccagctgcc
acataccctcctgatggaagtaccgagtacattggcctgagactggagtcctctccaata
gcccactgtccagcccctggccttaccaacgctcaggacagattagaaatggaccgcctt
tgggtgctccccttgtacatgcctagcaaagttgtgaatgccatgtggttccaagataca
gctgacctggcatttgaagcatcagggaggaagcctcacccattccctagtgtccacaaa
ataactgctgacatgctctccaatcttttgctgcaggctcttttccccattcaaggaatg
tcttgcaatgaggcaaagatccccggccaagcatacctctttgagttgcacctctcctcc
ttcgtggtcttcttaagcaacagactcttccacaagacactctcacctgcagtctgcctt
gagcagctcagcctctgcagagaagttcccttcaccacatatgtctctacccagattgaa
ggctactga