GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:39:48

Sequence gi568815588f:70304402_70520100 : 215699 bp : 49.08% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -   1153   1148    6                               1.05
 1.06 Term -   7663   7572   92  2  2  108   41    37 0.136  -1.12
 1.05 Intr -  19629  19462  168  1  0   75   95   301 0.714  29.42
 1.04 Intr -  36301  36152  150  2  0   93   80   231 0.931  22.93
 1.03 Intr -  56069  55946  124  2  1   15   64   157 0.193   6.16
 1.02 Intr -  67115  66976  140  0  2   67   78    32 0.246   0.28
 1.01 Init -  72132  72051   82  0  1   47   92   111 0.479   8.53
 1.00 Prom -  73544  73505   40                              -6.86

 2.00 Prom +  84002  84041   40                              -3.26
 2.01 Sngl +  85025  86047 1023  1  0   52   48   361 0.505  25.57
 2.02 PlyA +  86209  86214    6                               1.05

 3.00 Prom +  98711  98750   40                              -6.96
 3.01 Init + 100001 100145  145  1  1   80   83   167 0.176  15.80
 3.02 Intr + 115513 115698  186  2  0  101   91    72 0.759   8.46
 3.03 Term + 118621 118694   74  2  2  127   54     6 0.627  -0.83
 3.04 PlyA + 121578 121583    6                               1.05

 4.04 PlyA - 122044 122039    6                               1.05
 4.03 Term - 128687 128535  153  2  0  115   45   122 0.558   8.52
 4.02 Intr - 131582 130885  698  0  2   92   75   559 0.992  46.21
 4.01 Init - 137266 137074  193  1  1   98  102   269 0.993  26.43
 4.00 Prom - 142299 142260   40                              -6.76

 5.00 Prom + 150611 150650   40                              -5.96
 5.01 Init + 153995 154106  112  1  1   79  100   127 0.609  11.41
 5.02 Intr + 155469 155557   89  1  2   82  -23   118 0.386  -0.21
 5.03 Term + 155939 156037   99  1  0   85   43    82 0.787   1.53
 5.04 PlyA + 156662 156667    6                               1.05

 6.00 Prom + 160893 160932   40                              -6.46
 6.01 Init + 174514 174658  145  0  1   64   86   195 0.955  15.18
 6.02 Intr + 176213 176327  115  0  1  104   37    43 0.539   0.31
 6.03 Intr + 177539 177732  194  2  2   84   68    59 0.376   2.64
 6.04 Intr + 181518 181697  180  1  0   84   66    37 0.028   0.94
 6.05 Term + 190718 190812   95  0  2  122   42    51 0.607   1.89
 6.06 PlyA + 191304 191309    6                               1.05

 7.06 PlyA - 191868 191863    6                               1.05
 7.05 Term - 192441 192354   88  2  1   85   44    52 0.386  -2.37
 7.04 Intr - 193122 192902  221  0  2   38   94   106 0.100   3.30
 7.03 Intr - 199551 199458   94  2  1   41  101    88 0.198   5.37
 7.02 Intr - 199662 199617   46  1  1  135   57    22 0.271   1.27
 7.01 Init - 209929 209773  157  1  1   70   86    97 0.087   5.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 173688 173481  208  0  1   88   97   111 0.899   9.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:70304402_70520100|GENSCAN_predicted_peptide_1|251_aa
MLKKMGEAVARVARKVNETVESGSDTLGSWLCSVHGDWLLKNNRDTEEQDLKRPEARDST
THIPGSPQAPSTQQSETLSQKKRNEEQEKEEEEEEGEEEEGDGEEEEEEESNEEPDLAEC
KLVSFPIGIYKVLRNVSGQIHLITLANNELKSLTSKFMTTFSQLRELHLEGNFLHRLPSE
VSALQHLKAIDLSRNQFQDFPEQLTALPALETINLEENEIVGSHCGHHTGPGKHSGAIVC
NHPASQPVPLM

>gi568815588f:70304402_70520100|GENSCAN_predicted_CDS_1|756_bp
atgctgaagaagatgggtgaggccgtggccagagtagcaaggaaggtcaacgagacggtg
gagagcggctctgacactctgggctcctggctctgcagtgtgcatggggactggctttta
aagaataatcgtgacacagaggagcaggatttgaaaaggcctgaggcccgagactctact
acacacatccctgggagcccccaggcacctagtacacagcagagtgagaccctgtctcaa
aagaaaagaaatgaagagcaagagaaggaggaagaagaggaggagggggaggaggaggag
ggagatggggaggaggaggaggaggaggaaagcaatgaggaaccagacctggccgagtgc
aagctggtctcctttcccattggcatctacaaggtcctgcggaatgtctctggccagatc
cacctcatcaccctggctaacaacgagcttaagtccctcaccagcaagttcatgaccaca
ttcagtcagctccgagagctccacctggaggggaacttcctacaccgcctccccagcgag
gtcagtgccctgcagcacctcaaggccattgacctgtcccggaaccagttccaggacttc
cctgagcagcttaccgccctgccggcgctggagaccatcaacctggaggagaacgagatc
gtagggtcccactgtgggcaccacactggaccaggaaagcattctggagccatcgtttgt
aatcatcctgcttctcagccggttccactgatgtaa

>gi568815588f:70304402_70520100|GENSCAN_predicted_peptide_2|340_aa
MDSELMHSIVGSYHKPPERVFVPSFTQNEPSQNCHPANLEVTSPKILHSPNSQALILALK
TLQEKIHCLELERTQAEDDLNILSREAAQYKKALENETNERNLAHQELIKQKKDVSIQLS
SAQSRCTLLEKQLEYTKRMVLNVEREKNMILEQQAQLQREKEQDQMKLYAKLDKLDVLEK
ECFRLTTTQKTAEDKIKHLEEKLKEEEHQRKLFQDKASELQTGLEISKIMSSVSNLKHSK
EKKKSSKKTKCIKRGPPWQICSKFGALPFVAEKMRQHRDPHILQKPFNVTETRCLPKPSR
TTAWCKAITPDSEKSISICDNLSELLMAMQDELDQMSMEH

>gi568815588f:70304402_70520100|GENSCAN_predicted_CDS_2|1023_bp
atggattctgaattaatgcatagtatagtaggaagctatcataaacctccagaaagagta
tttgttccctcattcacccagaatgaaccatctcagaattgccatcctgcgaacttagaa
gttacctctcctaagatacttcatagcccaaatagccaagctcttattttagccttaaaa
actcttcaggaaaaaattcattgtttagagctggagagaacacaagctgaagatgacctg
aacattctttccagagaagcagcacagtataagaaggccttagagaatgaaacaaatgag
agaaatctagcacatcaggagctgataaagcagaaaaaagatgtaagtatacagttaagc
tcagcccagtctcgttgcactcttctagagaagcaactagaatatacaaagagaatggtt
ctcaatgtagagcgagaaaagaacatgatcctagaacaacaggcccagcttcagagggaa
aaagaacaagatcagatgaagctgtatgcaaaacttgacaagcttgatgtcttagaaaaa
gagtgttttagacttacaacaactcagaaaactgctgaggacaagattaaacatttagaa
gaaaaacttaaggaagaagaacatcagcgtaagctatttcaagacaaagcttctgagctt
caaactggacttgaaatcagtaaaattatgtcttcagtttcaaatttaaagcactccaag
gaaaagaagaaatcttcaaagaaaactaaatgtataaagagaggaccaccttggcaaatt
tgttcaaagtttggagcactgccttttgtggctgaaaagatgaggcaacatcgtgaccca
catatccttcagaaaccttttaacgtgactgagactagatgtctccccaagccttctaga
acaactgcctggtgtaaagctattactcctgactcagaaaagtccatttccatttgtgac
aatttatctgaacttttgatggcaatgcaagatgagctggaccaaatgagcatggagcac
taa

>gi568815588f:70304402_70520100|GENSCAN_predicted_peptide_3|134_aa
MSSSAGSGHQPSQSRAIPTRTVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRKFLL
DRRNSPMAQTPPCHLPNIPGVTSPGTLIEDSKVEVNNLNNLNNHDRKHAVGHFSNLHQRY
LKCWYLRISVTPLI

>gi568815588f:70304402_70520100|GENSCAN_predicted_CDS_3|405_bp
atgtcctcgtcagccggcagcggccaccagcccagccagagccgcgccatccccacccgc
accgtggccatcagcgacgccgcgcagctacctcatgactattgcaccacgcccgggggg
acgctcttctccaccacaccgggaggaactcgaatcatttatgacagaaagtttctgttg
gatcgtcgcaattctcccatggctcagaccccaccctgccacctgcccaatatcccagga
gtcactagccctggcaccttaattgaagactccaaagtagaagtaaacaatttgaacaac
ttgaacaatcacgacaggaaacatgcagttggccatttttcaaatttacatcaaagatac
ctgaagtgttggtatctgagaatatctgtcactcctcttatctga

>gi568815588f:70304402_70520100|GENSCAN_predicted_peptide_4|347_aa
MHAHCLPFLLHAWWALLQAGAATVATALLRTRGQPSSPSPLAYMLSLYRDPLPRADIIRS
LQAEDVAVDGQNWTFAFDFSFLSQQEDLAWAELRLQLSSPVDLPTEGSLAIEIFHQPKPD
TEQASDSCLERFQMDLFTVTLSQVTFSLGSMVLEVTRPLSKWLKHPGALEKQMSRVAGEC
WPRPPTPPATNVLLMLYSNLSQEQRQLGGSTLLWEAESSWRAQEGQLSWEWGKRHRRHHL
PDRSQLCRKVKFQVDFNLIGWGSWIIYPKQYNAYRCEGECPNPVGEEFHPTNHAYIQSLL
KRYQPHRVPSTCCAPVKTKPLSMLYVDNGRVLLDHHKDMIVEECGCL

>gi568815588f:70304402_70520100|GENSCAN_predicted_CDS_4|1044_bp
atgcacgcccactgcctgcccttccttctgcacgcctggtgggccctactccaggcgggt
gctgcgacggtggccactgcgctcctgcgtacgcgggggcagccctcgtcgccatcccct
ctggcgtacatgctgagcctctaccgcgacccgctgccgagggcagacatcatccgcagc
ctacaggcagaagatgtggcagtggatgggcagaactggacgtttgcttttgacttctcc
ttcctgagccaacaagaggatctggcatgggctgagctccggctgcagctgtccagccct
gtggacctccccactgagggctcacttgccattgagattttccaccagccaaagcccgac
acagagcaggcttcagacagctgcttagagcggtttcagatggacctattcactgtcact
ttgtcccaggtcaccttttccttgggcagcatggttttggaggtgaccaggcctctctcc
aagtggctgaagcaccctggggccctggagaagcagatgtccagggtagctggagagtgc
tggccgcggccccccacaccgcctgccaccaatgtgctccttatgctctactccaacctc
tcgcaggagcagaggcagctgggtgggtccaccttgctgtgggaagccgagagctcctgg
cgggcccaggagggacagctgtcctgggagtggggcaagaggcaccgtcgacatcacttg
ccagacagaagtcaactgtgtcggaaggtcaagttccaggtggacttcaacctgatcgga
tggggctcctggatcatctaccccaagcagtacaacgcctatcgctgtgagggcgagtgt
cctaatcctgttggggaggagtttcatccgaccaaccatgcatacatccagagtctgctg
aaacgttaccagccccaccgagtcccttccacttgttgtgccccagtgaagaccaagccg
ctgagcatgctgtatgtggataatggcagagtgctcctagatcaccataaagacatgatc
gtggaagaatgtgggtgcctctga

>gi568815588f:70304402_70520100|GENSCAN_predicted_peptide_5|99_aa
MAGPTEPGEVSAPGRPAGLEAEAQAPALVGKRAEGDPASPLPSSCRTFSTAVVRGAYTPR
FTVTLHPTSPQNSGPLHPPAYRASPVGSLTVISGSIHQD

>gi568815588f:70304402_70520100|GENSCAN_predicted_CDS_5|300_bp
atggcaggacctacggagcccggtgaggtgagcgcgccaggccggccggctgggctggag
gcagaggcccaggcgcccgccctcgtgggaaagcgcgcggagggcgacccggccagccct
ctcccctccagctgccgcaccttctccacagcagttgtccgtggtgcctacactccccgc
ttcacggtcacccttcacccgaccagtcctcagaactctggacccctgcacccaccggcc
taccgtgcgtctcccgtgggctccctcacagtcatctccggctccattcatcaagactga

>gi568815588f:70304402_70520100|GENSCAN_predicted_peptide_6|242_aa
MGWRSWEERAGARARAGRAPSLPDSAPAVRAQHAGRRSTDAPRSRGLAGFCFSGALRGGG
SVLMLVALGAVLGVGVAELTRSPWLALVGSVTSTSLWVQWEKISAKHVAQCMAWSECSVD
VAVGAFDYEPSPVARTLQGFLSSQVHGPGPLDEDSGTVAVQMFSHGRVIQEHLRAPFMRQ
AVVLGASSYLIFLGFIPASYADCLGFERLLPGHLHGPFPLLPGMCLHTAGAFLSSYVGIG
LP

>gi568815588f:70304402_70520100|GENSCAN_predicted_CDS_6|729_bp
atgggctggcgaagttgggaggagcgagctggagccagagcgcgcgccgggcgcgccccg
tcgctgcctgactcggcgcccgcagttcgggcgcagcacgccggccgcaggagcacggat
gccccccggagccgcgggctggcaggtttctgtttttctggagcacttcgtggaggtggc
agtgtgctcatgctcgtggccttgggtgcagttctgggagtgggagttgctgagctcacc
cgaagcccttggctggcactagtggggtcagtaacctctacctccttgtgggttcagtgg
gagaaaatcagtgcaaagcatgtggcccagtgcatggcatggagtgagtgctcagttgat
gtggcggtgggggcctttgattatgagccatcccctgtggccaggactctgcagggcttc
ctcagcagccaggtgcatggccctgggcctctggacgaggactctgggactgtggctgtg
cagatgttttctcatggcagagttatccaagaacatcttcgtgctccctttatgaggcaa
gctgttgttcttggggcatcatcttatttaatttttcttggcttcattccagcaagttat
gccgattgtttaggatttgagaggttactgccagggcatctgcacgggccgttccctctg
ctgccgggcatgtgtcttcacacggccggggccttcctgtcttcatacgtcggcataggc
cttccgtga

>gi568815588f:70304402_70520100|GENSCAN_predicted_peptide_7|201_aa
MQSFALQAGLPLRGAALTSSLQPAIPGEPLKQAPSPGRKEASWLPHTEMTSQGADTEAQM
VRVNLPQGCPSSYITLPKEVRKDKRRRDTKEATDMKEENSSGWRDGADMERAKGTTTQRV
GTVRRAVRVALRNDPNATSGQGVGGLVARHAPAPDRLGLSEAAVHTCTRQEHTPSGTSSV
SLLVKGGFYPSTQQFTPGSTS

>gi568815588f:70304402_70520100|GENSCAN_predicted_CDS_7|606_bp
atgcagtcctttgctctgcaggcggggctgccactgcggggggcagccctgacttccagc
cttcagcctgcaatccctggggagcctttgaagcaagcgccaagtcctggcaggaaggag
gcctcatggctgccacacactgagatgacaagtcaaggtgcagacactgaggcccagatg
gtccgggttaacttgccccaaggctgcccctcatcttacatcacgctcccaaaggaagtg
cggaaggataaaagaagacgtgatacaaaggaagccacagacatgaaagaagagaatagc
tcaggatggagagatggagcagatatggaaagagctaaaggcaccaccacccagagagtt
ggcacagtcaggagagctgtgcgagtggcgctgaggaatgacccaaacgctacctcgggt
cagggagttggcggccttgtggccaggcatgcgccggccccagacaggctgggtctgagc
gaggcagctgtgcacacctgcacccgccaggagcacacaccctctggaacctcctcggtc
tccctcttggtgaaaggaggattctaccccagcacccagcagttcacacctggctctacg
tcctag