Result of FASTA (omim) for pF1KB5520
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5520, 334 aa
  1>>>pF1KB5520 334 - 334 aa - 334 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8729+/-0.000283; mu= 11.3972+/- 0.018
 mean_var=138.6767+/-28.369, 0's: 0 Z-trim(122.8): 99  B-trim: 50 in 1/52
 Lambda= 0.108911
 statistics sampled from 41368 (41470) to 41368 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.486), width:  16
 Scan time:  9.440

The best scores are:                                      opt bits E(85289)
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 2297 371.5 1.4e-102
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 2297 371.5 1.4e-102
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 2297 371.5 1.4e-102
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326) 2084 338.0 1.6e-92
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257) 1581 258.9 8.5e-69
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241) 1573 257.6 1.9e-68
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B  ( 309) 1033 172.9 8.1e-43
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211)  818 138.9   9e-33
XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolo ( 232)  721 123.7 3.7e-28
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B  ( 232)  721 123.7 3.7e-28
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277)  573 100.5 4.3e-21
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324)  573 100.6 4.8e-21
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B  ( 340)  420 76.6 8.6e-14
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337)  413 75.5 1.8e-13
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B  ( 337)  413 75.5 1.8e-13
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348)  394 72.5 1.5e-12
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348)  394 72.5 1.5e-12
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B  ( 348)  394 72.5 1.5e-12
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420)  394 72.6 1.7e-12
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420)  394 72.6 1.7e-12
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462)  394 72.6 1.8e-12
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316)  368 68.4 2.3e-11
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A  ( 397)  369 68.6 2.5e-11
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B  ( 223)  340 63.9 3.8e-10
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453)  338 63.8 8.1e-10
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A  ( 480)  338 63.8 8.4e-10
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily (  77)  317 59.9 2.1e-09
XP_011543315 (OMIM: 610263,617091) PREDICTED: dnaJ ( 246)  322 61.1 2.9e-09
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350)  322 61.2 3.8e-09
NP_057390 (OMIM: 611341) dnaJ homolog subfamily B  ( 358)  321 61.0 4.3e-09
XP_016873168 (OMIM: 610263,617091) PREDICTED: dnaJ ( 218)  308 58.8 1.2e-08
XP_011543316 (OMIM: 610263,617091) PREDICTED: dnaJ ( 218)  308 58.8 1.2e-08
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B  ( 409)  312 59.7 1.3e-08
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409)  312 59.7 1.3e-08
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409)  312 59.7 1.3e-08
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411)  312 59.7 1.3e-08
NP_079495 (OMIM: 611203) dnaJ homolog subfamily C  ( 198)  290 56.0 8.1e-08
XP_011527351 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198)  290 56.0 8.1e-08
XP_011527350 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198)  290 56.0 8.1e-08
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A  ( 412)  289 56.1 1.6e-07
NP_001012339 (OMIM: 617048,617052) dnaJ homolog su ( 531)  287 55.8 2.3e-07
XP_005248307 (OMIM: 617048,617052) PREDICTED: dnaJ ( 553)  287 55.9 2.4e-07
NP_919259 (OMIM: 617048,617052) dnaJ homolog subfa ( 576)  287 55.9 2.5e-07
XP_011512268 (OMIM: 617048,617052) PREDICTED: dnaJ ( 598)  287 55.9 2.6e-07
XP_005248306 (OMIM: 617048,617052) PREDICTED: dnaJ ( 631)  287 55.9 2.7e-07
XP_011512267 (OMIM: 617048,617052) PREDICTED: dnaJ ( 676)  287 55.9 2.8e-07
XP_016876164 (OMIM: 601184,616192) PREDICTED: dnaJ ( 383)  280 54.6 3.9e-07
XP_016876163 (OMIM: 601184,616192) PREDICTED: dnaJ ( 421)  280 54.7 4.2e-07
XP_011519407 (OMIM: 601184,616192) PREDICTED: dnaJ ( 450)  280 54.7 4.4e-07
NP_006251 (OMIM: 601184,616192) dnaJ homolog subfa ( 504)  280 54.7 4.8e-07


>>XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (334 aa)
 initn: 2297 init1: 2297 opt: 2297  Z-score: 1962.6  bits: 371.5 E(85289): 1.4e-102
Smith-Waterman score: 2297; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
              250       260       270       280       290       300

              310       320       330    
pF1KB5 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
       ::::::::::::::::::::::::::::::::::
XP_005 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
              310       320       330    

>>XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (334 aa)
 initn: 2297 init1: 2297 opt: 2297  Z-score: 1962.6  bits: 371.5 E(85289): 1.4e-102
Smith-Waterman score: 2297; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
              250       260       270       280       290       300

              310       320       330    
pF1KB5 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
       ::::::::::::::::::::::::::::::::::
XP_011 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
              310       320       330    

>>XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (334 aa)
 initn: 2297 init1: 2297 opt: 2297  Z-score: 1962.6  bits: 371.5 E(85289): 1.4e-102
Smith-Waterman score: 2297; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
              250       260       270       280       290       300

              310       320       330    
pF1KB5 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
       ::::::::::::::::::::::::::::::::::
XP_005 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
              310       320       330    

>>NP_490647 (OMIM: 603511,611332) dnaJ homolog subfamily  (326 aa)
 initn: 2156 init1: 2072 opt: 2084  Z-score: 1781.9  bits: 338.0 E(85289): 1.6e-92
Smith-Waterman score: 2084; 93.8% identity (96.6% similar) in 325 aa overlap (1-324:1-325)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
              250       260       270       280       290       300

               310       320       330    
pF1KB5 VQREAAVE-QAQSETSLGARGQRGHKPRLGCCVLT
       ... .  . : : : :   .. .:.          
NP_490 LKEGGKRKKQKQREESKKKKSTKGNH         
              310       320               

>>XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (257 aa)
 initn: 1659 init1: 1575 opt: 1581  Z-score: 1356.1  bits: 258.9 E(85289): 8.5e-69
Smith-Waterman score: 1581; 95.1% identity (97.5% similar) in 244 aa overlap (1-244:1-244)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
       :::::::::::::::::::::::::::::::::::::::::::::::::::. .     .
XP_006 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGLKEGGKRKK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
       ...:                                                        
XP_006 QKQREESKKKKSTKGNH                                           
              250                                                  

>>NP_005485 (OMIM: 603511,611332) dnaJ homolog subfamily  (241 aa)
 initn: 1573 init1: 1573 opt: 1573  Z-score: 1349.7  bits: 257.6 E(85289): 1.9e-68
Smith-Waterman score: 1573; 100.0% identity (100.0% similar) in 231 aa overlap (1-231:1-231)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
       :::::::::::::::::::::::::::::::::::::::::::::::::::         
NP_005 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
                                                                   
NP_005 K                                                           
                                                                   

>>NP_660157 (OMIM: 611336) dnaJ homolog subfamily B memb  (309 aa)
 initn: 766 init1: 465 opt: 1033  Z-score: 889.7  bits: 172.9 E(85289): 8.1e-43
Smith-Waterman score: 1033; 64.7% identity (83.9% similar) in 249 aa overlap (1-248:1-243)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       :::::::::.::.::::::::::.:.:::::::::::::::::::::.:::::::::. .
NP_660 MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::::::::: :::::::   ::::.  :.::::..:::::.:.:  :::::: :::: .:
NP_660 KRDIYDKYGTEGLNGGG---SHFDDECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLE
               70           80        90       100       110       

              130        140       150       160       170         
pF1KB5 DFFGNRRGPR-GSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTS
       :.. :: :   :.:.: .: :::. : .: :   :::.:::.:: ::::: ::::::: .
NP_660 DLL-NRPGSSYGNRNRDAGYFFSTASEYPIF-EKFSSYDTGYTSQGSLGHEGLTSFSSLA
       120        130       140        150       160       170     

     180       190       200       210       220       230         
pF1KB5 FGGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALA
       : .::: :. :..:: :.::::.:.::.:.:. ::: :.:..:.:  . .:.::.....:
NP_660 FDNSGMDNYISVTTSDKIVNGRNINTKKIIESDQER-EAEDNGELTFFLVNSVANEEGFA
         180       190       200       210        220       230    

     240       250       260       270       280       290         
pF1KB5 EERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAA
       .:   : :.                                                   
NP_660 KECSWRTQSFNNYSPNSHSSKHVSQYTFVDNDEGGISWVTSNRDPPIFSAGVKEGGKRKK
          240       250       260       270       280       290    

>>XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (211 aa)
 initn: 1334 init1: 818 opt: 818  Z-score: 709.3  bits: 138.9 E(85289): 9e-33
Smith-Waterman score: 1086; 58.5% identity (61.2% similar) in 325 aa overlap (1-324:1-210)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
XP_016 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFF-----
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
                                                                   
XP_016 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
                                                         ::::::::::
XP_016 --------------------------------------------------GVADDDALAE
                                                           120     

              250       260       270       280       290       300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
         130       140       150       160       170       180     

               310       320       330    
pF1KB5 VQREAAVE-QAQSETSLGARGQRGHKPRLGCCVLT
       ... .  . : : : :   .. .:.          
XP_016 LKEGGKRKKQKQREESKKKKSTKGNH         
         190       200       210          

>>XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolog su  (232 aa)
 initn: 699 init1: 628 opt: 721  Z-score: 626.4  bits: 123.7 E(85289): 3.7e-28
Smith-Waterman score: 954; 63.1% identity (83.3% similar) in 233 aa overlap (1-231:1-222)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       :..::::::::  :::::::::::::::.:::::::.::::::.::: :.::::::::.:
XP_006 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::..::. : ..  .:::... . :::. :.:::::.:.::::::: :::::.:...:  
XP_006 KRSLYDRAGCDSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFFGGLDPFSFEFWDSP--
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
         :.. :: ::   ::  .: ..:. ::.:  .::::.     .:  : :. :.::::::
XP_006 --FNSDRGGRGHGLRG--AFSAGFGEFPAFMEAFSSFNM----LGCSG-GSHTTFSSTSF
        120       130         140       150            160         

                190       200       210       220       230        
pF1KB5 GGSGMGN--FKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDAL
       :::. :.  :::. .::.:.::.:.:::::::::::::::::::::::.:.::       
XP_006 GGSSSGSSGFKSVMSSTEMINGHKVTTKRIVENGQERVEVEEDGQLKSVTVNGKEQLKWM
     170       180       190       200       210       220         

      240       250       260       270       280       290        
pF1KB5 AEERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASA
                                                                   
XP_006 DSK                                                         
     230                                                           

>>NP_699161 (OMIM: 611337) dnaJ homolog subfamily B memb  (232 aa)
 initn: 699 init1: 628 opt: 721  Z-score: 626.4  bits: 123.7 E(85289): 3.7e-28
Smith-Waterman score: 954; 63.1% identity (83.3% similar) in 233 aa overlap (1-231:1-222)

               10        20        30        40        50        60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
       :..::::::::  :::::::::::::::.:::::::.::::::.::: :.::::::::.:
NP_699 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
       ::..::. : ..  .:::... . :::. :.:::::.:.::::::: :::::.:...:  
NP_699 KRSLYDRAGCDSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFFGGLDPFSFEFWDSP--
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
         :.. :: ::   ::  .: ..:. ::.:  .::::.     .:  : :. :.::::::
NP_699 --FNSDRGGRGHGLRG--AFSAGFGEFPAFMEAFSSFNM----LGCSG-GSHTTFSSTSF
        120       130         140       150            160         

                190       200       210       220       230        
pF1KB5 GGSGMGN--FKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDAL
       :::. :.  :::. .::.:.::.:.:::::::::::::::::::::::.:.::       
NP_699 GGSSSGSSGFKSVMSSTEMINGHKVTTKRIVENGQERVEVEEDGQLKSVTVNGKEQLKWM
     170       180       190       200       210       220         

      240       250       260       270       280       290        
pF1KB5 AEERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASA
                                                                   
NP_699 DSK                                                         
     230                                                           




334 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 22:37:34 2016 done: Thu Nov  3 22:37:35 2016
 Total Scan time:  9.440 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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