Result of FASTA (ccds) for pF1KB5343
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5343, 588 aa
  1>>>pF1KB5343 588 - 588 aa - 588 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.7741+/-0.00128; mu= -1.4083+/- 0.077
 mean_var=255.2088+/-52.451, 0's: 0 Z-trim(109.1): 16  B-trim: 172 in 1/51
 Lambda= 0.080284
 statistics sampled from 10657 (10660) to 10657 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.327), width:  16
 Scan time:  2.680

The best scores are:                                      opt bits E(32554)
CCDS13880.1 PES1 gene_id:23481|Hs108|chr22         ( 588) 3866 461.6 1.3e-129
CCDS58802.1 PES1 gene_id:23481|Hs108|chr22         ( 583) 3816 455.8  7e-128
CCDS74842.1 PES1 gene_id:23481|Hs108|chr22         ( 449) 2950 355.4   9e-98


>>CCDS13880.1 PES1 gene_id:23481|Hs108|chr22              (588 aa)
 initn: 3866 init1: 3866 opt: 3866  Z-score: 2440.6  bits: 461.6 E(32554): 1.3e-129
Smith-Waterman score: 3866; 100.0% identity (100.0% similar) in 588 aa overlap (1-588:1-588)

               10        20        30        40        50        60
pF1KB5 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
              490       500       510       520       530       540

              550       560       570       580        
pF1KB5 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
              550       560       570       580        

>>CCDS58802.1 PES1 gene_id:23481|Hs108|chr22              (583 aa)
 initn: 2264 init1: 2023 opt: 3816  Z-score: 2409.3  bits: 455.8 E(32554): 7e-128
Smith-Waterman score: 3816; 99.1% identity (99.1% similar) in 588 aa overlap (1-588:1-583)

               10        20        30        40        50        60
pF1KB5 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MGGLEKKKYERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNKGSTA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTVERLKDNKPNYKLDHII
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFMHYIIAARALRK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTTLLGFVNFRLYQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVPATEEEAEVDEF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 PTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
       :::::     ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PTDGE-----EDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSL
                   310       320       330       340       350     

              370       380       390       400       410       420
pF1KB5 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYFSGVQLP
         360       370       380       390       400       410     

              430       440       450       460       470       480
pF1KB5 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEGDGDEEGENEEE
         420       430       440       450       460       470     

              490       500       510       520       530       540
pF1KB5 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEESEAKRLAIMMM
         480       490       500       510       520       530     

              550       560       570       580        
pF1KB5 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
         540       550       560       570       580   

>>CCDS74842.1 PES1 gene_id:23481|Hs108|chr22              (449 aa)
 initn: 2950 init1: 2950 opt: 2950  Z-score: 1868.8  bits: 355.4 E(32554): 9e-98
Smith-Waterman score: 2950; 100.0% identity (100.0% similar) in 449 aa overlap (140-588:1-449)

     110       120       130       140       150       160         
pF1KB5 NKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRLTVEFM
                                     ::::::::::::::::::::::::::::::
CCDS74                               MCFLFSTFPRTGKCHVQTIQLCRRLTVEFM
                                             10        20        30

     170       180       190       200       210       220         
pF1KB5 HYIIAARALRKVFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 HYIIAARALRKVFLSIKGIYYQAEVLGQPIVWITPYAFSHDHPTDVDYRVMATFTEFYTT
               40        50        60        70        80        90

     230       240       250       260       270       280         
pF1KB5 LLGFVNFRLYQLLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LLGFVNFRLYQLLNLHYPPKLEGQAQAEAKAGEGTYALDSESCMEKLAALSASLARVVVP
              100       110       120       130       140       150

     290       300       310       320       330       340         
pF1KB5 ATEEEAEVDEFPTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ATEEEAEVDEFPTDGEMSAQEEDRRKELEAQEKHKKLFEGLKFFLNREVPREALAFIIRS
              160       170       180       190       200       210

     350       360       370       380       390       400         
pF1KB5 FGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 FGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLP
              220       230       240       250       260       270

     410       420       430       440       450       460         
pF1KB5 VAEYFSGVQLPPHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VAEYFSGVQLPPHLSPFVTEKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDDNNEG
              280       290       300       310       320       330

     470       480       490       500       510       520         
pF1KB5 DGDEEGENEEEEEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 DGDEEGENEEEEEDAEAGSEKEEEARLAALEEQRMEGKKPRVMAGTLKLEDKQRLAQEEE
              340       350       360       370       380       390

     530       540       550       560       570       580        
pF1KB5 SEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SEAKRLAIMMMKKREKYLYQKIMFGKRRKIREANKLAEKRKAHDEAVRSEKKAKKARPE
              400       410       420       430       440         




588 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 22:28:54 2016 done: Thu Nov  3 22:28:55 2016
 Total Scan time:  2.680 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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