Result of FASTA (omim) for pF1KB5331
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5331, 415 aa
  1>>>pF1KB5331 415 - 415 aa - 415 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.3986+/-0.000484; mu= 6.8383+/- 0.030
 mean_var=175.5164+/-38.129, 0's: 0 Z-trim(114.3): 95  B-trim: 303 in 1/50
 Lambda= 0.096809
 statistics sampled from 23917 (24012) to 23917 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.282), width:  16
 Scan time:  9.010

The best scores are:                                      opt bits E(85289)
NP_001034672 (OMIM: 605926) PRKCA-binding protein  ( 415) 2709 391.2 2.5e-108
NP_001034673 (OMIM: 605926) PRKCA-binding protein  ( 415) 2709 391.2 2.5e-108
NP_036539 (OMIM: 605926) PRKCA-binding protein [Ho ( 415) 2709 391.2 2.5e-108
XP_016884580 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 327) 2132 310.5 3.8e-84
XP_016884581 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 385) 1960 286.6 7.3e-77
XP_016884579 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 385) 1960 286.6 7.3e-77
XP_016884582 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_006724442 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_016884583 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_006724443 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_011528819 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 397) 1658 244.4 3.7e-64
XP_016884584 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 334) 1046 158.9 1.8e-38


>>NP_001034672 (OMIM: 605926) PRKCA-binding protein [Hom  (415 aa)
 initn: 2709 init1: 2709 opt: 2709  Z-score: 2065.9  bits: 391.2 E(85289): 2.5e-108
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)

               10        20        30        40        50        60
pF1KB5 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
              310       320       330       340       350       360

              370       380       390       400       410     
pF1KB5 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
              370       380       390       400       410     

>>NP_001034673 (OMIM: 605926) PRKCA-binding protein [Hom  (415 aa)
 initn: 2709 init1: 2709 opt: 2709  Z-score: 2065.9  bits: 391.2 E(85289): 2.5e-108
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)

               10        20        30        40        50        60
pF1KB5 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
              310       320       330       340       350       360

              370       380       390       400       410     
pF1KB5 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
              370       380       390       400       410     

>>NP_036539 (OMIM: 605926) PRKCA-binding protein [Homo s  (415 aa)
 initn: 2709 init1: 2709 opt: 2709  Z-score: 2065.9  bits: 391.2 E(85289): 2.5e-108
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)

               10        20        30        40        50        60
pF1KB5 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
              310       320       330       340       350       360

              370       380       390       400       410     
pF1KB5 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
              370       380       390       400       410     

>>XP_016884580 (OMIM: 605926) PREDICTED: PRKCA-binding p  (327 aa)
 initn: 2132 init1: 2132 opt: 2132  Z-score: 1631.7  bits: 310.5 E(85289): 3.8e-84
Smith-Waterman score: 2132; 100.0% identity (100.0% similar) in 327 aa overlap (89-415:1-327)

       60        70        80        90       100       110        
pF1KB5 ALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVL
                                     ::::::::::::::::::::::::::::::
XP_016                               MIQEVKGEVTIHYNKLQADPKQGMSLDIVL
                                             10        20        30

      120       130       140       150       160       170        
pF1KB5 KKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFY
               40        50        60        70        80        90

      180       190       200       210       220       230        
pF1KB5 ELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTY
              100       110       120       130       140       150

      240       250       260       270       280       290        
pF1KB5 LNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLIL
              160       170       180       190       200       210

      300       310       320       330       340       350        
pF1KB5 RCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVF
              220       230       240       250       260       270

      360       370       380       390       400       410     
pF1KB5 PIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
              280       290       300       310       320       

>>XP_016884581 (OMIM: 605926) PREDICTED: PRKCA-binding p  (385 aa)
 initn: 1950 init1: 1950 opt: 1960  Z-score: 1500.9  bits: 286.6 E(85289): 7.3e-77
Smith-Waterman score: 1960; 95.3% identity (96.8% similar) in 317 aa overlap (99-415:70-385)

       70        80        90       100       110       120        
pF1KB5 EITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVEN
                                     .:    .  :..: .   ::::::::::::
XP_016 SLLLEGLSLGSVETLRLKSWTAASSPLDRPLHIMDQSLRPREGAAAP-VLKKVKHRLVEN
      40        50        60        70        80         90        

      130       140       150       160       170       180        
pF1KB5 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
      100       110       120       130       140       150        

      190       200       210       220       230       240        
pF1KB5 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
      160       170       180       190       200       210        

      250       260       270       280       290       300        
pF1KB5 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
      220       230       240       250       260       270        

      310       320       330       340       350       360        
pF1KB5 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
      280       290       300       310       320       330        

      370       380       390       400       410     
pF1KB5 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
       :::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
      340       350       360       370       380     

>>XP_016884579 (OMIM: 605926) PREDICTED: PRKCA-binding p  (385 aa)
 initn: 1950 init1: 1950 opt: 1960  Z-score: 1500.9  bits: 286.6 E(85289): 7.3e-77
Smith-Waterman score: 1960; 95.3% identity (96.8% similar) in 317 aa overlap (99-415:70-385)

       70        80        90       100       110       120        
pF1KB5 EITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVEN
                                     .:    .  :..: .   ::::::::::::
XP_016 SLLLEGLSLGSVETLRLKSWTAASSPLDRPLHIMDQSLRPREGAAAP-VLKKVKHRLVEN
      40        50        60        70        80         90        

      130       140       150       160       170       180        
pF1KB5 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
      100       110       120       130       140       150        

      190       200       210       220       230       240        
pF1KB5 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
      160       170       180       190       200       210        

      250       260       270       280       290       300        
pF1KB5 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
      220       230       240       250       260       270        

      310       320       330       340       350       360        
pF1KB5 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
      280       290       300       310       320       330        

      370       380       390       400       410     
pF1KB5 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
       :::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
      340       350       360       370       380     

>>XP_016884582 (OMIM: 605926) PREDICTED: PRKCA-binding p  (287 aa)
 initn: 1877 init1: 1877 opt: 1877  Z-score: 1439.9  bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)

      100       110       120       130       140       150        
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
                                     ::::::::::::::::::::::::::::::
XP_016                               MSSGTADALGLSRAILCNDGLVKRLEELER
                                             10        20        30

      160       170       180       190       200       210        
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
               40        50        60        70        80        90

      220       230       240       250       260       270        
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
              100       110       120       130       140       150

      280       290       300       310       320       330        
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
              160       170       180       190       200       210

      340       350       360       370       380       390        
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
              220       230       240       250       260       270

      400       410     
pF1KB5 TRGAAGPLDKGGSWCDS
       :::::::::::::::::
XP_016 TRGAAGPLDKGGSWCDS
              280       

>>XP_006724442 (OMIM: 605926) PREDICTED: PRKCA-binding p  (287 aa)
 initn: 1877 init1: 1877 opt: 1877  Z-score: 1439.9  bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)

      100       110       120       130       140       150        
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
                                     ::::::::::::::::::::::::::::::
XP_006                               MSSGTADALGLSRAILCNDGLVKRLEELER
                                             10        20        30

      160       170       180       190       200       210        
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
               40        50        60        70        80        90

      220       230       240       250       260       270        
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
              100       110       120       130       140       150

      280       290       300       310       320       330        
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
              160       170       180       190       200       210

      340       350       360       370       380       390        
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
              220       230       240       250       260       270

      400       410     
pF1KB5 TRGAAGPLDKGGSWCDS
       :::::::::::::::::
XP_006 TRGAAGPLDKGGSWCDS
              280       

>>XP_016884583 (OMIM: 605926) PREDICTED: PRKCA-binding p  (287 aa)
 initn: 1877 init1: 1877 opt: 1877  Z-score: 1439.9  bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)

      100       110       120       130       140       150        
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
                                     ::::::::::::::::::::::::::::::
XP_016                               MSSGTADALGLSRAILCNDGLVKRLEELER
                                             10        20        30

      160       170       180       190       200       210        
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
               40        50        60        70        80        90

      220       230       240       250       260       270        
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
              100       110       120       130       140       150

      280       290       300       310       320       330        
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
              160       170       180       190       200       210

      340       350       360       370       380       390        
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
              220       230       240       250       260       270

      400       410     
pF1KB5 TRGAAGPLDKGGSWCDS
       :::::::::::::::::
XP_016 TRGAAGPLDKGGSWCDS
              280       

>>XP_006724443 (OMIM: 605926) PREDICTED: PRKCA-binding p  (287 aa)
 initn: 1877 init1: 1877 opt: 1877  Z-score: 1439.9  bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)

      100       110       120       130       140       150        
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
                                     ::::::::::::::::::::::::::::::
XP_006                               MSSGTADALGLSRAILCNDGLVKRLEELER
                                             10        20        30

      160       170       180       190       200       210        
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
               40        50        60        70        80        90

      220       230       240       250       260       270        
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
              100       110       120       130       140       150

      280       290       300       310       320       330        
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
              160       170       180       190       200       210

      340       350       360       370       380       390        
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
              220       230       240       250       260       270

      400       410     
pF1KB5 TRGAAGPLDKGGSWCDS
       :::::::::::::::::
XP_006 TRGAAGPLDKGGSWCDS
              280       




415 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 22:28:16 2016 done: Thu Nov  3 22:28:18 2016
 Total Scan time:  9.010 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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