GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:25:50

Sequence gi568815586f:15782708_16002975 : 220268 bp : 38.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5624   5758  135  0  0   60   66   128 0.183   7.42
 1.02 Intr +   6372   6510  139  1  1   52   59   122 0.113   4.30
 1.03 Term +  20534  20936  403  2  1  -20   49   336 0.756  12.54
 1.04 PlyA +  23057  23062    6                               1.05

 2.04 PlyA -  23657  23652    6                               1.05
 2.03 Term -  55842  55693  150  0  0   40   55   127 0.439   1.53
 2.02 Intr -  62733  62647   87  0  0   68   98    55 0.854   3.75
 2.01 Init -  66365  66267   99  2  0   62  115    54 0.908   5.83
 2.00 Prom -  76585  76546   40                              -4.15

 3.00 Prom +  89022  89061   40                              -4.75
 3.01 Init +  94184  94415  232  1  1   38   14   201 0.498   6.17
 3.02 Intr +  99613  99733  121  2  1   53  -26   191 0.363   2.83
 3.03 Intr +  99886 100112  227  1  2   58  105   277 0.790  23.11
 3.04 Intr + 100834 100969  136  2  1   47   94   170 0.999  12.21
 3.05 Intr + 107221 107302   82  1  1   88   69    82 0.985   5.02
 3.06 Intr + 107890 107962   73  0  1  101  115     8 0.986   2.86
 3.07 Intr + 111340 111436   97  2  1   28  123    51 0.983   0.75
 3.08 Intr + 112652 112789  138  2  0  109   95    31 0.955   4.56
 3.09 Intr + 115175 115311  137  2  2   50   95   104 0.999   6.59
 3.10 Intr + 117197 117346  150  0  0  101   99   104 0.998  12.01
 3.11 Intr + 118240 118305   66  2  0  107   67    84 0.662   6.16
 3.12 Intr + 120291 120436  146  1  2   31   95    98 0.320   3.88
 3.13 Term + 121820 121885   66  1  0   58   47    43 0.050  -5.84
 3.14 PlyA + 125476 125481    6                               1.05

 4.11 PlyA - 125527 125522    6                               1.05
 4.10 Term - 128524 128450   75  1  0   18   42   110 0.196  -3.74
 4.09 Intr - 128821 128648  174  1  0   83   70   111 0.409   8.01
 4.08 Intr - 129878 129801   78  2  0   33  110    68 0.095   2.33
 4.07 Intr - 135038 134958   81  2  0   43   60   107 0.197   2.32
 4.06 Intr - 146352 146210  143  1  2   52   78   117 0.284   6.25
 4.05 Intr - 162774 162607  168  1  0   33   86   136 0.121   6.90
 4.04 Intr - 164354 163206 1149  0  0    1   40   524 0.021  27.02
 4.03 Intr - 166399 166131  269  0  2   -9   71   225 0.045   7.35
 4.02 Intr - 178478 178386   93  1  0  131   93    21 0.005   5.06
 4.01 Init - 184276 183993  284  1  2   53   41   234 0.152  11.76
 4.00 Prom - 188795 188756   40                              -6.25

 5.05 PlyA - 188807 188802    6                              -0.45
 5.04 Term - 190131 189600  532  2  1   20   48   368 0.311  18.73
 5.03 Intr - 191461 191430   32  1  2   80   66    26 0.236  -4.39
 5.02 Intr - 193880 193704  177  2  0   42   78   148 0.615   8.39
 5.01 Init - 200845 200702  144  1  0   66   53   114 0.585   5.87
 5.00 Prom - 202981 202942   40                              -5.65

 6.03 PlyA - 203227 203222    6                               1.05
 6.02 Term - 205164 205021  144  0  0   65   48   144 0.749   5.03
 6.01 Init - 207959 207840  120  2  0   45   82   132 0.617   8.54
 6.00 Prom - 211201 211162   40                              -4.55

 7.00 Prom + 212588 212627   40                              -5.95
 7.01 Init + 217323 217378   56  2  2   60   97    23 0.296   1.21
 7.02 Term + 218695 218881  187  1  1  108   42   119 0.421   5.28
 7.03 PlyA + 218962 218967    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  18990  19066   77  2  2   50   80    70 0.907   3.01
S.002 Init - 135742 135620  123  1  0   67   86    84 0.828   6.32
S.003 Intr + 175481 175628  148  1  1   61   90   140 0.921  10.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:15782708_16002975|GENSCAN_predicted_peptide_1|225_aa
XVCGFQILTTASCPPRDSNSTTGPMGGGGFEKHCRRTVGAKILQTAHKGGFLKSRKSKPP
DPGTGAFRQGALTSDPPSGPRLSPETPRAQTRDPLIDKEHYGKPVAEVTEEEKNDQELKE
TQLIKAAPTMTTSSVFEDPTISKFTNMMMKGENKVLARSFMTQVLEAMRSTMMLLQGNRQ
PLNTTPIPEVPNRFGTRNWFPPTGERGLMGEGWKGLMISSGTGFS

>gi568815586f:15782708_16002975|GENSCAN_predicted_CDS_1|678_bp
natgtctgcggatttcaaatcctaaccacggcgtcctgccccccgcgagattccaacagt
actacgggccctatgggaggaggaggatttgagaaacactgccggagaacggtcggtgca
aagattttgcaaacagcacacaaaggcggatttttaaaatcgagaaagtcaaagccgccg
gaccccgggaccggcgcctttcgccaaggggctcttacctcggatccgccctcggggcca
cggctttccccggagacgccgcgagcccagacgagagatcccttgattgacaaggaacat
tatggcaagccagtggctgaagtaactgaggaggagaagaatgatcaggaactcaaggag
actcagctcatcaaagctgctccaacaatgacaacgagctctgtgtttgaagaccccaca
atcagtaaattcaccaacatgatgatgaagggagaaaacaaagtactagccagatccttc
atgactcaggttctggaagctatgagaagtaccatgatgcttctgcaggggaacaggcaa
ccattgaacacaacccctataccagaggtccccaaccgttttggcaccagaaactggttc
ccaccgacaggggagagggggttgatgggagaggggtggaagggattgatgatttcatca
ggcactggattctcataa

>gi568815586f:15782708_16002975|GENSCAN_predicted_peptide_2|111_aa
MVSPIYMFLYNLATIQEVKSVSPSWAIVAASNKELICLTISTKTSHQQEATCGVHILRSN
GKSVAKDHTSHVSEHNIVYVAGVTAAASVGREIGRRGKVGSSNSFRAMPWQ

>gi568815586f:15782708_16002975|GENSCAN_predicted_CDS_2|336_bp
atggtatctcctatctatatgttcctctataaccttgccactatccaagaggtgaagtct
gtgtccccttcctgggccattgtggcagcttcaaataaggaactgatctgccttactatt
tccacaaaaactagtcatcagcaagaagctacctgtggggtgcacattctcaggtcaaat
ggtaagtctgtagcaaaagaccatacatcacacgtctcagagcacaacatcgtgtatgta
gctggggtgacagcagcagcctcagtaggaagagagattgggagaagaggcaaagttggc
agcagcaacagcttcagggcaatgccatggcagtga

>gi568815586f:15782708_16002975|GENSCAN_predicted_peptide_3|556_aa
MRNSLESLSDRIEYVENRNSELEDKVFELTQTNKDKEKRIRKYEQSLQEVWGYRKRPNLR
RIGVPEEEENSKILENIFTSTRRARPPANRHFRRVLCVIYVVTSCRCRCGRCESWLARPA
LVSGRGPGAARGTAAEERKDNDDPQLASPVAGFAAAMAMRQTPLTCSGHTRPVVDLAFSG
ITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAK
VWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTS
GIKKALWCSEDKQILSADDKTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGR
SIAFHSAVSLDPIKSFEAPATINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGH
FGPIHCVRFSPDGELYASGSEDGTLRLWQTVVGKTYGLWKCVLPEEDSGELAKPKIGFPE
TTEEELVSIQLTKTSKQRKASAFQSYCLLKAETAVNNEENELAPVLEQLTNLVLPVQSFV
YWFPAAAVTSDHKCVP

>gi568815586f:15782708_16002975|GENSCAN_predicted_CDS_3|1671_bp
atgcgaaattctctggaaagtctcagcgatagaattgaatacgtagaaaacagaaattca
gagcttgaagacaaggtttttgaattaacccaaaccaacaaagacaaagaaaaaagaata
agaaaatatgaacaaagcctccaagaagtctggggttacaggaaacgaccaaacctaaga
agaattggtgttcctgaagaagaagagaattctaaaatcttggaaaacatattcacttct
acccggcgagcccgccctcccgccaatcgtcatttccggcgggtgctctgcgtcatttac
gtcgtcacttcctgccgatgccggtgtggacgctgtgaatcgtggctggcccgcccagcc
ctagtgtcagggcgggggcctggagcagcccgaggcactgcagcagaagagagaaaagac
aacgacgaccctcagctcgccagtccggtcgctggcttcgccgccgccatggcaatgaga
cagacgccgctcacctgctctggccacacgcgacccgtggttgatttggccttcagtggc
atcacgccttatgggtatttcttaatcagcgcttgcaaagatggtaaacctatgctacgc
cagggagatacaggagactggattggaacatttttgggtcataaaggtgctgtttggggt
gcaacactgaataaggatgccaccaaagcagctacagcagctgcagatttcacagccaaa
gtgtgggatgctgtctcaggagatgaattgatgaccctggctcataaacacattgtcaag
actgtggatttcacgcaggatagtaattatttgttaaccgggggacaggataaactgtta
cgcatatatgacttgaacaaacctgaagcagaacctaaggaaattagtggtcatacttct
ggtataaaaaaagctctgtggtgcagtgaggataaacagattctttctgctgatgacaaa
actgttcgactttgggatcatgctactatgacagaagtgaaatctctaaattttaatatg
tctgttagtagtatggaatatattcctgagggagagattttggttataacttatggacga
tctattgcttttcatagtgcagtaagtttggacccaattaaatcctttgaagctcctgca
accatcaattctgcatctcttcatcctgagaaagaatttcttgttgcaggcggtgaagat
tttaaactttataagtatgattataatagtggagaagaattagaatcctacaagggacac
tttggtcctattcactgtgtgagatttagtcctgatggagaactctatgccagtggttca
gaagatggaacattgagactatggcaaactgtggtaggaaaaacgtatggcctttggaaa
tgtgtgcttcctgaagaagatagtggtgagctggcaaagccaaagattggttttccagag
acaacagaagaggagctagttagtatacaactgactaaaacaagcaagcagagaaaagca
tcagccttccagagttactgtctgcttaaggcagaaacagcagtaaataatgaggaaaat
gaattagctccagtgctggaacaactaactaacttggtgttacctgtacagtcctttgtg
tattggtttcctgctgctgctgtaacaagtgaccacaaatgtgtaccttaa

>gi568815586f:15782708_16002975|GENSCAN_predicted_peptide_4|837_aa
MGKMQHGVVIQRNTSSGAGGPGSRWSWCSGGLVVFAIRNVTEISKDMTFPKESTPRLWKS
HTGTESENHSSQILRNMDTSGMTEEVKELANETQGFCVAFIRSCMYCDKSPLTPFHSFSN
LSSTIRSRLTPHTAGYPSETKLPEERSDSNICCSAIFAVLQPLLLTPRQTGSGVDLQQTP
TDLQLRVLTVRRKTNKQKGHPHQNPICTSPSSKTKEIRIKKLTQNCSTTWKLNNLLLNNY
WVHNEMKAEIKMFFETNENKVITYQNLWDTFKAVCRVKFIALNAHRKKQERSKIDTLTSQ
LKELEKQERTHLTASRRQKITEIRAELKEIETQKTLRKINESRSWFFEKINKIDRLLARL
IKKKTEKNQIDAIKKKGDITTNPTETQTTIREYYKHLYANKLENLEEMDKFLDTYILPRL
NQEEVESLNRPITGSEIEAIINTLPTKKSPGPDRFTAEFYQRYKEELVAFLLKLFQSIEK
EGILPDSFYEASIILIPKPSRDTTKRENFRPISLMNIDAKILNKILANRIQQHIKKLIHH
DQVGFIPGMQGWFNVHKSINVIQHINRSKDKNHIISIDAEKAFDKIQQPFLLKILNKLEH
KIPRNPTYKGCEGPLQGELQTTAQRNQRGHKQMEEHSMLMDRKNQYRENGHTAQAEPEAL
VEEVTWLSQCSKGADSCPVFTENAAPVCRTGFNSYRSRRLRKSVEKLSSTKPLQSLVPKR
SGTVGVKQRVTTTKITILQMKKLKRKVINLSEVTQRKPLGDPQPGHWAAAGPALVPAALN
ARERGWGAPRAPYRARCPDCARTWRGQLRSCRLEYCSARKSRCSPPPSSPRGTEPER

>gi568815586f:15782708_16002975|GENSCAN_predicted_CDS_4|2514_bp
atgggtaaaatgcaacatggtgtagtgatacaacggaatacgagttctggagcaggtggc
cccgggtccaggtggtcctggtgctcaggaggtttggttgtctttgccataaggaatgta
actgaaatcagcaaggacatgacgtttccaaaggaaagcacaccaaggttgtggaaaagt
cacactgggacagaatctgagaaccacagttctcagattctgagaaacatggacacttca
gggatgacagaggaggtgaaggagcttgcaaatgagacgcaggggttttgtgtggctttt
atcaggtcctgcatgtactgtgacaagtctcccctaactccatttcactccttttctaat
ttatccagtaccatcaggagcagactgacaccccacacggccggttacccctctgagacg
aagctcccagaggaacgatcagacagcaacatttgctgttcagcaatattcgccgttctg
cagcctctgctgctgacaccaaggcaaacagggtctggagtggacctccagcaaactcca
acagacctgcagctgagggtcctgactgttagaaggaaaactaacaaacagaaaggacat
ccacaccaaaaccccatctgtacgtcaccatcatcaaagaccaaagaaatcaggattaag
aaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaataactac
tgggtacataatgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaa
gttataacataccagaatctctgggacacatttaaagcagtgtgtagagtgaaatttata
gcactaaatgcccacaggaaaaagcaggaaagatctaaaattgacaccctaacatcacaa
ttaaaagaactagagaagcaagagcgaacacatttaacagctagcagaaggcaaaaaata
actgagatcagagcagaactaaaggagatagagacacaaaaaacccttcgaaaaatcaat
gaatccaggagctggttttttgaaaagatcaacaaaattgatagactgctagcaagacta
ataaagaagaaaacagagaagaatcaaatagatgcaataaaaaaaaaaggggatatcacc
accaatcccacagaaacacaaactaccatcagagaatactataaacacctctatgcaaat
aaactagaaaatctagaagaaatggataaattcctggacacatacatcctcccaagacta
aaccaggaagaagttgaatccctgaatagaccaataacaggctctgaaattgaggcaata
atcaataccttaccaaccaaaaaaagtccaggaccagacagattcacagccgaattctac
cagaggtacaaggaggagctggtagcattccttctgaaactattccaatcaatagaaaaa
gagggaatcctccctgactcattttatgaggccagcatcatcctgataccaaagcctagc
agagacacaacaaaaagagagaattttagaccaatatccctgatgaacatcgatgcaaaa
atcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccat
gatcaagtgggcttcatccctgggatgcaaggctggttcaacgtacacaaatcaataaat
gtaatccagcatataaacagaagcaaagacaaaaaccacattatctcaatagatgcagaa
aaggcctttgacaaaattcaacagcccttcttgctaaaaattctcaataaattagagcat
aaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaa
accactgctcaacgaaatcaaagaggacacaaacaaatggaagaacattccatgctcatg
gataggaagaatcaatatcgtgaaaatggccatactgcccaagctgaacccgaagccctg
gtggaagaagtcacgtggctgagccagtgctctaaaggagctgactcctgtccagttttc
acagagaacgctgctcccgtctgcaggacaggatttaacagctacagatctagaaggctg
agaaaatctgtggaaaaactgtcctccacaaaaccacttcagtccctggtgccaaaaagg
tccgggaccgttggtgtaaagcaaagggtaactaccactaaaataaccattttacagatg
aagaaacttaagcgcaaagttattaatttgtccgaagtcacacagcgaaaacccctcggg
gacccacagccagggcactgggcggcagcaggccccgcgctagtcccggcggcgctgaac
gcgagggagaggggatggggagccccgcgggccccttaccgagctcggtgccccgattgt
gcgcggacatggcgcgggcagctccggagctgccggctggaatattgctccgcaaggaaa
tctcgctgctcccctcccccgtcttctccacgaggtaccgaaccggagcgctaa

>gi568815586f:15782708_16002975|GENSCAN_predicted_peptide_5|294_aa
MGQTAGGEAVSGEIIPEKGGTCAEPQDVELFGQKAFRAGGTERTKTQKKDDSELYLWELS
TTDKGEQGFSQPHTAKKVERNLAPMSLGPREILGLHVATSWQHDGGEEIHTEVFKGNRLT
SKSSTRSWSPAPLPLIPERRSLLLRVVSNFPLSPVLTAVARDHGHTPHTLASHHIHRSLS
GCTLEVPDFCTMREMPLGHIMRQELEKISLEYIMRCLREVSFCYPQNFLGKEVVDNCIQE
HIKQLHCKGALRDSQLAGMCAVSLKGELWGDQFTPQFWEQQEGPRGHWLPPVPH

>gi568815586f:15782708_16002975|GENSCAN_predicted_CDS_5|885_bp
atgggccaaacagcagggggagaagcagtgtcaggggaaataattcctgaaaaaggtggt
acctgtgctgaaccccaagatgtggagttatttgggcaaaaggcattccgggcaggaggc
acagaacgtacaaagactcaaaagaaagatgattctgaactctatctttgggagctctca
accacagacaagggagagcagggattttctcagccacacactgccaagaaggtggagaga
aacctagcccccatgtcactggggcctagagaaattcttggcctgcatgttgctacatca
tggcaacatgatggaggcgaggaaatacacactgaagtatttaagggtaacagattaact
tccaagtccagcactagatcgtggagtcccgcaccactcccactgatccctgaacgcaga
tcccttctcctgagagttgtgagcaactttcccctgtccccagtactgactgcggtggct
cgggaccatggccacactccccacaccttggcttcacatcacatacatcgttccctctct
gggtgcacgctggaggtccccgacttctgcactatgcgtgaaatgcccctgggacacatc
atgaggcaggaattggagaaaatttccctagagtacatcatgcgctgtctgcgggaagtc
agcttctgctacccgcaaaacttcctgggcaaggaggtggtggacaactgcatccaggag
cacattaaacagctgcattgcaagggggccctgcgggacagccagctggctgggatgtgt
gcagtgtctctaaagggtgaactgtggggtgatcagttcaccccacagttctgggagcaa
caagaagggccgcgaggccattggcttcctcctgtccctcactga

>gi568815586f:15782708_16002975|GENSCAN_predicted_peptide_6|87_aa
MTTHRHIKENNRHWGLLEFGGWKEEEDQKKRQMDTQINIWLCDPGQQCEPSAACRAKWVE
QVQQPGAKLKQKCTEVSDWQSDTLKIL

>gi568815586f:15782708_16002975|GENSCAN_predicted_CDS_6|264_bp
atgacaacacatagacacatcaaggagaataacagacactggggtcttttggagtttgga
gggtggaaggaggaagaggatcagaaaaaacgacaaatggatactcagattaacatctgg
ctgtgcgacccaggccagcagtgtgagccaagtgcagcctgccgggccaagtgggtggaa
caagtccagcaaccaggagcaaaactcaagcagaagtgcacggaggtttctgactggcaa
agcgacaccctaaagatcctgtga

>gi568815586f:15782708_16002975|GENSCAN_predicted_peptide_7|80_aa
MEQSRCLWDISGGKFDCAWARVEKFSVLFETIDSEKRTTHTETRKRFVLSNKERVIQTCG
VMVLGLCDVFDALQGGQFLG

>gi568815586f:15782708_16002975|GENSCAN_predicted_CDS_7|243_bp
atggagcagagtagatgcctgtgggacatatcggggggcaaatttgattgtgcttgggct
agagtggaaaagttcagtgttttattcgagacaattgactcagagaaaagaacaactcac
acagagaccagaaagagattcgtgctcagtaacaaagagagagtaatacagacttgtgga
gtcatggtcttaggtctgtgtgacgtgtttgatgctctgcaaggtggtcagtttctgggg
tga