GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:44:08

Sequence gi568815584f:52630475_52871103 : 240629 bp : 39.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1686   1835  150  2  0   68   94    43 0.344   2.34
 1.02 Intr +   3354   3472  119  2  2   76   71   116 0.779   7.04
 1.03 Term +   4464   4641  178  0  1   80   48    60 0.688  -2.62
 1.04 PlyA +   5072   5077    6                               1.05

 2.13 PlyA -   6395   6390    6                               1.05
 2.12 Term -   7805   7769   37  1  1   93   37    44 0.130  -4.37
 2.11 Intr -  15813  15680  134  0  2  109   96    79 0.686   9.32
 2.10 Intr -  21834  21765   70  2  1   84   86    21 0.496  -0.23
 2.09 Intr -  22841  22595  247  0  1   91   38   126 0.494   3.50
 2.08 Intr -  33373  33327   47  0  2   96   94    16 0.859   0.13
 2.07 Intr -  36021  35901  121  1  1   46   44   149 0.902   4.93
 2.06 Intr -  41229  41156   74  2  2   75   30    94 0.922   0.43
 2.05 Intr -  41397  41321   77  0  2   67   20   195 0.943   7.99
 2.04 Intr -  47998  47960   39  1  0  127   93    40 0.979   5.90
 2.03 Intr -  51934  51851   84  1  0  112   47    54 0.766   2.80
 2.02 Intr -  53433  53314  120  0  0  103   63    64 0.842   5.17
 2.01 Init -  65007  64894  114  0  0   77   99   253 0.292  23.56
 2.00 Prom -  70784  70745   40                              -6.35

 3.00 Prom +  73791  73830   40                              -2.15
 3.01 Init +  76704  76830  127  2  1  102   65   214 0.990  20.87
 3.02 Intr +  77835  77914   80  1  2   45   96   111 0.949   5.95
 3.03 Intr +  78009  78048   40  2  1   93   82    37 0.867   0.48
 3.04 Intr +  78290  78342   53  0  2   79   90    78 0.813   4.81
 3.05 Intr +  83407  83494   88  0  1   82   77    35 0.661   0.42
 3.06 Intr +  87607  87668   62  2  2  102   98    16 0.776   1.53
 3.07 Intr +  87755  87878  124  1  1   79   91    73 0.936   5.94
 3.08 Intr +  90636  90716   81  1  0   69   82    50 0.687   1.19
 3.09 Intr +  93491  93562   72  0  0   88  110   100 0.999  10.66
 3.10 Term +  97025  97143  119  0  2   94   28   144 0.980   6.72
 3.11 PlyA +  97195  97200    6                               1.05

 4.00 Prom +  97425  97464   40                              -6.25
 4.01 Init + 100001 100149  149  1  2  107   29   211 0.764  16.71
 4.02 Intr + 127400 127450   51  2  0  101  110    10 0.357   1.60
 4.03 Intr + 129208 129280   73  1  1  117   93    12 0.457   3.09
 4.04 Intr + 138366 138459   94  2  1  111  110    28 0.443   5.92
 4.05 Term + 140559 140632   74  1  2   36   38   101 0.205  -3.01
 4.06 PlyA + 141520 141525    6                               1.05

 5.10 PlyA - 143201 143196    6                               1.05
 5.09 Term - 147984 147837  148  2  1  110   42    49 0.548  -1.11
 5.08 Intr - 150266 150205   62  2  2   54   87    83 0.460   1.41
 5.07 Intr - 151437 151310  128  1  2   83   95   145 0.997  14.18
 5.06 Intr - 154190 154023  168  0  0   73   80   103 0.679   7.00
 5.05 Intr - 163777 163622  156  2  0   81   37    71 0.002   0.36
 5.04 Intr - 171120 171023   98  2  2   46   78    69 0.045   0.43
 5.03 Intr - 189562 189512   51  0  0  104   80    60 0.014   3.90
 5.02 Intr - 199375 199222  154  2  1   92  131    10 0.013   3.91
 5.01 Init - 213376 213337   40  1  1   66   85    90 0.769   6.90
 5.00 Prom - 216962 216923   40                              -3.55

 6.07 PlyA - 220899 220894    6                               1.05
 6.06 Term - 228076 227903  174  1  0  113   42   149 0.587   9.58
 6.05 Intr - 229240 229099  142  0  1   84   52   193 0.999  14.73
 6.04 Intr - 229991 229867  125  2  2   43   86   108 0.986   4.56
 6.03 Intr - 234148 233927  222  1  0   79   80   152 0.994  10.90
 6.02 Intr - 234379 234273  107  2  2   65  101    73 0.981   5.31
 6.01 Init - 237652 237604   49  1  1   72   91    49 0.950   4.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 160448 160751  304  1  1   40   39   171 0.871   4.91
S.002 Init - 201355 201258   98  1  2   64   89    42 0.800   1.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:52630475_52871103|GENSCAN_predicted_peptide_1|148_aa
GMSLCQTVVVGSVVILLYSSRACYNLVVVTISQDTLESPFNYGWDNLSDKAPAGMINSHS
YSSRAYFFDNPRRYDSDDDLPRLGSSREGSLPNSQSLGWYGTMTGCGSSSYTVTPHLNGP
MTDTAPLLFTCSNLDLNNHHSLYVTPQN

>gi568815584f:52630475_52871103|GENSCAN_predicted_CDS_1|447_bp
ggtatgtctctgtgccagactgtcgtcgtgggctctgtagtcattcttctgtactcttcc
agagcttgttataatttggtggtggtcaccatatctcaggatacattagaaagtccattt
aattatggctgggataatctttcagataaggcacctgctggcatgataaatagtcacagt
tatagttccagagcttactttttcgacaatccaagacgatatgatagtgatgatgacctg
ccaagactgggaagttcaagagaaggaagtttaccaaattcgcaaagtttgggctggtat
ggcaccatgactgggtgtggcagcagcagttacacagtcactccccacctgaatggacct
atgacagatactgctcctttgctctttacttgtagtaatttagatttgaacaatcatcat
agcttatatgtgacaccacaaaactga

>gi568815584f:52630475_52871103|GENSCAN_predicted_peptide_2|387_aa
MGRGWGFLFGLLGAVWLLSSGHGEEQPPETAAQRCFCQVSGYLDDCTCDVETIDRFNNYR
LFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPCQSDEVPDGIKSASYKY
SEEANNLIEECEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFCEADDIQSPEAEYVD
LLLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQETWLEKKWGHNITEF
QQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKMLL
LEILHEIKSFPLHFDENSFFAGDKKEAHKLKTQGLGTALKILFSEKLIANMPESGPSYEF
HLTRQEIVSLFNAFGRDMDEIGNNHSQ

>gi568815584f:52630475_52871103|GENSCAN_predicted_CDS_2|1164_bp
atgggccgcggctggggattcttgtttggcctcctgggcgccgtgtggctgctcagctcg
ggccacggagaggagcagcccccggagacagcggcacagaggtgcttctgccaggttagt
ggttacttggatgattgtacctgtgatgttgaaaccattgatagatttaataactacagg
cttttcccaagactacaaaaacttcttgaaagtgactactttaggtattacaaggtaaac
ctgaagaggccgtgtcctttctggaatgacatcagccagtgtggaagaagggactgtgct
gtcaaaccatgtcaatctgatgaagttcctgatggaattaaatctgcgagctacaagtat
tctgaagaagccaataatctcattgaagaatgtgaacaagctgaacgacttggagcagtg
gatgaatctctgagtgaggaaacacagaaggctgttcttcagtggaccaagcatgatgat
tcttcagataacttctgtgaagctgatgacattcagtcccctgaagctgaatatgtagat
ttgcttcttaatcctgagcgctacactggttacaagggaccagatgcttggaaaatatgg
aatgtcatctacgaagaaaactgttttaagccacagacaattaaaagacctttaaatcct
ttggcttctggtcaagagacctggttagaaaagaaatggggacacaacattacagaattt
caacagcgatttgatggaattttgactgaaggagaaggtccaagaaggcttaagaacttg
tattttctctacttaatagaactaagggctttatccaaagtgttaccattcttcgagcgc
ccagattttcaactctttactggaaataaaattcaggatgaggaaaacaaaatgttactt
ctggaaatacttcatgaaatcaagtcatttcctttgcattttgatgagaattcatttttt
gctggggataaaaaagaagcacacaaactaaagactcagggtttgggcactgctctgaag
atcttattttctgagaaattgatagcaaatatgccagaaagtggacctagttatgaattc
catctaaccagacaagaaatagtatcattattcaacgcatttggaagggacatggatgaa
attggaaataatcattctcagtaa

>gi568815584f:52630475_52871103|GENSCAN_predicted_peptide_3|281_aa
MAIPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQVIELPLTNPELFQRVGIIPP
KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP
CIIFMDEIDAIDIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCT
EAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV

>gi568815584f:52630475_52871103|GENSCAN_predicted_CDS_3|846_bp
atggccattcccggcatcccctatgagagacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagttgcttgaacacaaggagatcgacggccgtctt
aaggagttaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggccctacagagtgttgggcagatcgtgggtgaagtgcttaaacagttaactgaa
gaaaaattcattgttaaagctaccaatggaccaagatatgttgtgggttgtcgtcgacag
gtgatagaattacctcttacaaacccagagttatttcagcgtgtaggaataatacctcca
aaaggctgtttgttatatggaccaccaggtacgggaaaaacactcttggcacgagccgtt
gctagccagctggactgcaatttcttaaaggttgtatctagttctattgtagacaagtac
attggtgaaagtgctcgtttgatcagagaaatgtttaattatgctagagatcatcaacca
tgcatcatttttatggatgaaatagatgctattgatattgatttgccaaatgaacaagca
agattagacatactgaaaatccatgcaggtcccattacaaagcatggtgaaatagattat
gaagcaattgtgaagctttcggatggctttaatggagcagatctgagaaatgtttgtact
gaagcaggtatgttcgcaattcgtgctgatcatgattttgtagtacaggaagacttcatg
aaagcagtcagaaaagtggctgattctaagaagctggagtctaaattggactacaaacct
gtgtaa

>gi568815584f:52630475_52871103|GENSCAN_predicted_peptide_4|146_aa
MEDVKLEFPSLPQCKEDAEVSRSRGCHAQASPCGSGRGATPVPNRLSRHLAAFVIAYIME
TFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIYLAKLTIQMMSPLQIERSLSVHSG
TTGSLKRTHEEEDDFGTMQVATAQNG

>gi568815584f:52630475_52871103|GENSCAN_predicted_CDS_4|441_bp
atggaggacgtgaagctggagttcccttcccttccacagtgcaaggaagacgccgaggtg
agtcgctcccgtggctgccacgcacaggcctctccctgtggctccggccgaggggcgacc
ccagtccccaaccgtcttagccgccaccttgcagcctttgttattgcatacattatggaa
acatttggaatgaagtacagagatgcttttgcttatgttcaagaaagaagattttgtatt
aatcctaatgctggatttgtccatcaacttcaggaatatgaagccatctacctagcaaaa
ttaacaatacagatgatgtcaccactccagatagaaaggtcattatctgttcattctggt
accacaggcagtttgaagagaacacatgaagaagaggatgattttggaaccatgcaagtg
gcgactgcacagaatggctga

>gi568815584f:52630475_52871103|GENSCAN_predicted_peptide_5|334_aa
MVHQGLDNALDTRDIFPLTLSGPSLSTSPEPLRLWRAPGLPQAKHLPHSCFSPRLDHEDR
WHSLRSQDFENPDSNKEIDMASCVTNTDKFVCDKSSSLLLEQLVTTSLQCRVVLMLGLQV
LTMVPGQGILKLLIQANVPESLLNSITDIYVYPRNSLICANENIVVDLTRKMKPDETPMF
DPSLLKEVDWSQNTATFSPAISPTHPGEGLVLRPLCTADLNRESFEHMKKSGDYYVTVVE
DVTLGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNC
YKITLECLPQNVGFYKKFGYTVSEENYMCRRFLK

>gi568815584f:52630475_52871103|GENSCAN_predicted_CDS_5|1005_bp
atggtgcatcaggggcttgacaacgcactcgacaccagagatatttttcctctaactctt
agtggtccttctttgagcacctccccagaacctcttaggctgtggagagcaccagggctc
cctcaagccaagcacttgcctcacagctgcttttctccccgtctagaccacgaggacagg
tggcactccctccggtcacaagattttgagaacccagattcaaataaagaaatagatatg
gccagttgtgtgactaacactgacaaatttgtctgtgacaagagttcttccttactactt
gagcagcttgtcaccacttcccttcagtgcagggtggttctaatgctgggattacaggtg
ttaaccatggtacccggccaaggtattcttaaacttctcattcaggccaacgttcctgaa
tcacttctcaactcaatcactgacatctatgtttatccacgtaatagccttatttgtgcc
aatgagaatattgttgttgaccttactagaaaaatgaaacctgatgaaactcctatgttt
gacccaagtctactcaaagaagtggactggagtcagaatacagctacattttctccagcc
atttccccaacacatcctggagaaggcttggttttgaggcctctttgtactgctgactta
aatagagaatcttttgagcatatgaagaaatctggggattattatgttacagttgtagaa
gatgtgactctaggacagattgttgctacggcaactctgattatagaacataaattcatc
cattcctgtgctaagagaggaagagtagaagatgttgttgttagtgatgaatgcagagga
aagcagcttggcaaattgttattatcaacccttactttgctaagcaagaaactgaactgt
tacaagattacccttgaatgtctaccacaaaatgttggtttctataaaaagtttggatat
actgtatctgaagaaaactacatgtgtcggaggtttctaaagtaa

>gi568815584f:52630475_52871103|GENSCAN_predicted_peptide_6|272_aa
MRGSRRRNWQTLDDKNGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWM
AACRLASKGKTMADSSYNLEVQNILSFLKMQHLNPDPQLIPEQITTDITPECLVSPRYLK
KYKNKQITARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFGITHFIARFQGGKKEELIGI
AYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMVTVEFADEVRLSFICTEVDCKVVHE
FIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV

>gi568815584f:52630475_52871103|GENSCAN_predicted_CDS_6|819_bp
atgagaggtagtcgcagaagaaactggcagacattagatgataaaaatggatgtgaagtt
accccagatgtaaacatttcaggccaaaaatttaacattaaactcctgattccagttgca
gaaggcatgaatgaaatctggcttcgttgtgacaatgaaaaacagtatgcacactggatg
gcagcctgcagattagcctccaaaggcaagaccatggcggacagttcttacaacttagaa
gttcagaatattctttcctttctgaagatgcagcatttaaacccagatcctcagttaata
ccagagcagatcacgactgatataactcctgaatgtttggtgtctccccgctatctaaaa
aagtataagaacaagcagataacagcgagaatcttggaggcccatcagaatgtagctcag
atgagtctaattgaagccaagatgagatttattcaagcttggcagtcactacctgaattt
ggcatcactcacttcattgcaaggttccaagggggcaaaaaagaagaacttattggaatt
gcatacaacagactgattcggatggatgccagcactggagatgcaattaaaacatggcgt
ttcagcaacatgaaacagtggaatgtcaactgggaaatcaaaatggtcaccgtagagttt
gcagatgaagtacgattgtccttcatttgtactgaagtagattgcaaagtggttcatgaa
ttcattggtggctacatatttctctcaacacgtgcaaaagaccaaaacgagagtttagat
gaagagatgttctacaaacttaccagtggttgggtgtga