GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:20:40

Sequence gi568815592f:63476881_63680171 : 203291 bp : 38.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   3233   3628  396  1  0   71   35   374 0.805  24.49
 1.02 PlyA +   4352   4357    6                               1.05

 2.06 PlyA -   5152   5147    6                               1.05
 2.05 Term -  14364  14082  283  2  1   25   55   122 0.018  -3.49
 2.04 Intr -  21828  21582  247  1  1   75   75   117 0.081   4.70
 2.03 Intr -  30806  30610  197  1  2   59   98   147 0.806  10.94
 2.02 Intr -  48482  48380  103  0  1  116   -7   103 0.002   1.91
 2.01 Init -  52039  51991   49  1  1   96   89    12 0.599   1.29
 2.00 Prom -  52295  52256   40                              -6.55

 3.00 Prom +  58751  58790   40                              -5.75
 3.01 Sngl +  60942  61118  177  2  0   91   54   179 0.954   9.50
 3.02 PlyA +  61485  61490    6                               1.05

 4.04 PlyA -  62009  62004    6                               1.05
 4.03 Term -  72436  71828  609  1  0  -17   36   563 0.386  34.11
 4.02 Intr -  72618  72444  175  2  1   73    8   189 0.816   8.42
 4.01 Init -  73638  73538  101  0  2   40   80    57 0.515  -0.11
 4.00 Prom -  75147  75108   40                              -3.95

 5.03 PlyA -  75383  75378    6                               1.05
 5.02 Term -  89840  89707  134  0  2   27   43   162 0.796   2.87
 5.01 Init -  90118  89977  142  1  1    9   92   151 0.885   7.94
 5.00 Prom -  93897  93858   40                              -6.05

 6.03 PlyA -  94147  94142    6                               1.05
 6.02 Term -  96309  95805  505  2  1   62   37   360 0.954  21.23
 6.01 Init -  96688  96447  242  1  2   66  -40   205 0.464   0.89
 6.00 Prom -  98450  98411   40                              -6.55

 7.00 Prom +  98945  98984   40                              -9.05
 7.01 Init + 100001 100105  105  1  0   75   94    44 0.963   3.99
 7.02 Intr + 101557 101649   93  0  0   36   89    78 0.792   1.94
 7.03 Intr + 102018 102148  131  2  2   48   84   165 0.995  10.67
 7.04 Intr + 102377 102451   75  2  0   48   98    57 0.563   0.41
 7.05 Term + 103177 103294  118  1  1  122   38   124 0.976   7.83
 7.06 PlyA + 104549 104554    6                               1.05

 8.04 PlyA - 104808 104803    6                               1.05
 8.03 Term - 121542 121330  213  0  0   64   42   160 0.538   5.25
 8.02 Intr - 121623 121592   32  1  2  116   86   -23 0.283  -2.77
 8.01 Init - 139288 138967  322  1  1   67   53   273 0.011  19.25
 8.00 Prom - 144880 144841   40                              -5.05

 9.00 Prom + 145149 145188   40                              -3.85
 9.01 Init + 152201 152203    3  1  0  113   81     0 0.049   1.85
 9.02 Intr + 158249 158543  295  1  1   40   91   106 0.051   1.76
 9.03 Intr + 158953 159270  318  2  0   54   92   237 0.091  15.71
 9.04 Intr + 159405 159564  160  1  1   90   40    56 0.029  -0.88
 9.05 Intr + 169647 169915  269  0  2   87   91   187 0.832  15.15
 9.06 Intr + 203120 203281  162  0  0   89   84   162 0.887  14.93

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  48482  48277  206  0  2  116   37   130 0.939   7.25
S.002 Init + 199512 199572   61  2  1   67  103    30 0.897   3.86


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_1|131_aa
LSDAADAMGFRDLKSPTGLQVHNGYLADQSCNKGYVPSQADVAVIEAVSSPLSGNLCHAL
HWYNYIKSYEKEKASLAGMKKALGKYGPANVEDSRGSGATDSEDDNDIYLFGFDKGEESK
ESKRQREEYPA

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_1|396_bp
ctctcagatgcagctgatgccatgggtttcagagacctgaaaagccccactggcctccag
gtgcacaatggttacctggctgaccagagctgcaacaaggggtatgtgccatcacaagca
gacgtggcagtaattgaagcagtctccagtccattgtccggtaatttgtgtcatgctcta
cattggtataattacatcaagtcttacgaaaaggaaaaagccagcctagcaggaatgaag
aaagctttgggcaagtatggacctgctaatgtggaagatagtagaggaagtggagctaca
gatagtgaagatgacaatgacatttatctatttggatttgataagggggaggaaagcaaa
gaatcaaaaaggcaaagggaagaataccctgcatag

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_2|292_aa
MGFHHVSQAGLELLTSAPPLAESNRKPGGKNDTGGYPQPASASQGQIWKSGKDEESGFEM
NRANTTYEVQELLITRMVSYENWLWIFYWILIETVPDCGTPGDYATRSTHQDVIRYKQCN
REKPHENIASLSCPCSSIVSTTFDNMTSFGFWVSVMTTANLDCLLLARHCVGEDRRTRLI
PDSAFIKLMFQWEPIENGRLKCWKIWGLGDLSAFSQGHLISMVTIEKRKVLVNPTLGKGQ
IVGKTLFLNVCMRVVSEELSIGISRLSKEDPPSPLWAGIIQPVEGPNQKKKG

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_2|879_bp
atggggtttcaccatgttagtcaggctggtcttgaactcctgacctcagctcccccattg
gcagaatctaaccggaagccaggtggcaaaaatgacactggaggttacccacaaccggct
tcagcatcacaaggccaaatatggaagagcggaaaggatgaagaatcaggctttgaaatg
aacagagccaatacaacttatgaggtccaggaactgctgataacaagaatggtctcatat
gaaaactggctttggatattttactggattctaatagaaactgttcctgattgtggaaca
ccaggtgactatgcaactagatctactcatcaggatgttatcagatacaaacaatgtaac
agggagaaaccacatgaaaacattgcttcactgtcctgtccttgttcaagcattgtgtcc
actacctttgataacatgacaagttttgggttttgggtttctgtcatgactacagcaaac
cttgactgcctactacttgccagacattgtgtaggtgaagatcggagaacaagactgatc
ccagattctgctttcataaagcttatgttccaatgggagccaatagaaaatggaaggtta
aagtgctggaagatctggggtcttggtgacctctcagctttcagtcaggggcacctcatc
agcatggtcaccatagagaagagaaaggtgctggttaaccctaccctgggaaagggccag
atagttggtaaaacattatttctgaatgtgtgtatgagggtagtttcagaagagcttagc
attggaatcagtagactgagtaaagaagatccaccttcaccactgtgggcaggcatcatt
caacccgttgagggccctaatcaaaaaaaaaaaggttga

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_3|58_aa
MRTPQPPRIWRKGHGRSEREVGENPTNGIQAGPDRSLKEQKRGCSVTDKFHLHQSEFT

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_3|177_bp
atgaggacacctcaaccgccaagaatctggcgaaagggccacggccgtagtgagagagaa
gttggggagaatcctaccaatggaatacaggcaggcccagacaggagtttaaaagaacag
aaaagaggatgtagtgtcacagacaaatttcacttgcatcagtcagagtttacctga

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_4|294_aa
MKVGVAYSPLSVAGFFLQVESSEERFNFCSFTLRKEGQGKEGGSGPAVVKKQEVKKVVNP
LFEKRPKNFDIGQDIQPKRDLTSFVKWPPLYQRQRAILCKWLKVPPEINQFTQALDHQTA
ALLLQLAHKYRSETKQEKKQRLLALAKKKAAGKGGIPTKRPPVLRAGVNTITTLLENKKA
QPVVIAHDVDPIELVVFLPALCHKMRVPYCIIKGEARLGRLVHRKTCTTVAFIQVNSEDK
GALAKLVGAIRTDYNDRYNEIRRHWGGNVLGPKSVACIGKLEKAKAQELATKLG

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_4|885_bp
atgaaagttggtgtggcctactcacccctctctgtagcagggttctttcttcaggtagag
tcgtctgaagaacgcttcaatttttgtagcttcaccctcaggaaagaaggccaagggaaa
gaaggtggctccggccctgctgtcgtgaagaagcaggaggttaagaaagtggtgaatccc
ctgtttgagaaacggcctaagaattttgacattggacaggacattcagcccaaaagagac
ctaaccagctttgtgaaatggcccccactatatcagcggcagagagccatcctctgtaag
tggctgaaagtgcctcctgagattaaccagttcacccaggccctggaccaccaaacagct
gctctgctacttcagctggcccacaagtacagatcagagactaagcaagagaagaaacag
aggctgttggccctggccaaaaagaaagctgctggcaaagggggcatccccactaagaga
ccacctgtccttcgagcaggagttaacaccatcaccaccttgctagagaataagaaagct
cagccggtggtgattgcacacgacgtggatcccatcgagctggttgtcttcttgcctgcc
ctgtgtcataaaatgcgggtcccttactgcattatcaagggggaggcaagactgggacgt
ctagtccacaggaagacctgcaccactgtcgccttcatacaggttaactcagaagacaaa
ggcgctttggctaagctagtgggagctatcaggactgactacaatgacagatacaatgag
atccgccgtcactggggaggcaatgtcctgggtcccaagtctgtggcttgcattggcaag
ctcgaaaaggcaaaggctcaagaacttgcaactaagctgggttaa

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_5|91_aa
MNEELLLMKEKREWFLEIESTAGEDAVSIVEMIKDLEYHINLADKAVEIATATLTFSNYL
PDQSAAIITEAGFSNSKDYDLLKAQMTVSIF

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_5|276_bp
atgaatgaggagttgcttcttatgaaggagaaaagagagtggtttcttgagatagaatct
actgctggtgaagatgccgtaagcattgttgaaatgataaaggatttagaatatcacata
aacttagctgataaagcagtggaaattgccacagccaccttaaccttcagcaactacctc
cctgatcagtcagctgccatcatcactgaggcaggattctccaacagcaaagattatgac
ttgctgaaggctcagatgactgttagcattttttag

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_6|248_aa
MPQRAAAPRTRLCAPEHARCAPSPRRNHGFAPRLQSGAGAEAILSEARVPAVEHKSVAAP
SGCPAPTPELREALEPDRYHPAATLLRPNKEAPGRRGACHARTGRARPKGQGRRRRSQSG
FCATHPARCGSRNCPRPPQKPDRAAPVAPGSGGTQKPVPPAANRHPAAPRGPASASAQPA
AIGRPQGHNPPAPTRDPPEPQPGATWRRRRAPNKGDSGDGGPVVDSQPERRRCDGYSQEY
VYSLKIVA

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_6|747_bp
atgccccagagggccgccgccccgcgcacgcggctgtgtgcgcccgagcacgcccgctgc
gccccctctccgcgccgcaatcacgggttcgcgccgcgccttcagtcaggcgcgggcgcc
gaggccattttgtctgaggctcgggtcccggccgtcgagcacaagagtgtagctgcaccc
agtggctgtcccgcgcccaccccggagctccgagaagctctggaaccagatcgttaccac
cctgcagccactctcctccggccgaacaaagaggccccgggacgccgcggagcctgccat
gcccggacgggtcgcgccagaccaaagggccaagggcggaggcggcggtcacaaagcggc
ttttgtgccacccacccggcccgctgcggaagccgaaactgcccccggccgccgcagaag
ccggaccgcgccgcccccgtcgctccgggctcgggagggactcaaaagccggtgcctccg
gcggccaaccgccaccccgcagccccgaggggcccggcatctgcctccgcacagccggcc
gcaatcggccggccacagggccataacccgcccgctcccacccgggacccaccggaaccg
caacccggggcaacctggaggagacgccgggctccgaacaaaggcgacagcggggatggg
gggccggtcgtggattcccagcccgagaggcgacgatgcgacggctactcacaggaatat
gtttactcattgaagattgtggcctaa

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_7|173_aa
MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK
EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI
EGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_7|522_bp
atggctcgaatgaaccgcccagctcctgtggaagtcacatacaagaacatgagatttctt
attacacacaatccaaccaatgcgaccttaaacaaatttatagaggaacttaagaagtat
ggagttaccacaatagtaagagtatgtgaagcaacttatgacactactcttgtggagaaa
gaaggtatccatgttcttgattggccttttgatgatggtgcaccaccatccaaccagatt
gttgatgactggttaagtcttgtgaaaattaagtttcgtgaagaacctggttgttgtatt
gctgttcattgcgttgcaggccttgggagagctccagtacttgttgccctagcattaatt
gaaggtggaatgaaatacgaagatgcagtacaattcataagacaaaagcggcgtggagct
tttaacagcaagcaacttctgtatttggagaagtatcgtcctaaaatgcggctgcgtttc
aaagattccaacggtcatagaaacaactgttgcattcaataa

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_8|188_aa
MIKGVTLGFHYKMRSVYAHFPINVVIQENGSLVEIRNFLGKKYIRRVWMRAGVVCSVSQA
QKDELILEGNDIELVSNSAALIQQATTVKKKDIREFLDGIYVSEKGTDLHFCNSFHIRCL
LELFDLRARLSLLLQVSSLIVANGHHNRAFPTHLTLLQAASKRTGTYKSFSIQSSLVSGK
NVVFTRSL

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_8|567_bp
atgatcaagggtgttacactaggcttccattacaagatgagatctgtgtatgctcacttc
cccatcaacgtcgttatccaggagaatgggtctcttgttgaaatccgaaatttcttgggt
aaaaaatacatccgcagggtttggatgagagcaggtgttgtttgttcagtatctcaagcc
cagaaagatgaattaatccttgaaggaaatgacattgagcttgtttcaaattcagcggct
ttgattcaacaagccacaacagttaaaaagaaggatatcagggaatttttggatggtatc
tatgtctctgaaaaaggaactgaccttcacttttgcaactcttttcatattcgttgtctc
ttggaactcttcgatcttcgtgctcggctgtctttattgcttcaggtgtcttccctgata
gttgcaaatggccaccacaaccgagcgttccctactcacctgacgttgctccaagcagca
agcaagcgcacgggtacttacaagtctttctccatacaatcttctcttgtttcaggaaag
aatgttgtttttaccagaagcctctaa

>gi568815592f:63476881_63680171|GENSCAN_predicted_peptide_9|403_aa
MISSMSGLIEDGWILLSVSALNQLLYAVLVEGWEENLALDTCSWQRNGGSTERSWRPLRE
TWDHILKTAYWIPRMFLGGSNLSPEVDQPCRVRVTEVVNAPAPPPHADGCGVSRRRTVPT
RQATFGLRAAAAATRIRRAARKPRIVSSAAAIWSQEEKRLWQRRRRPARTPSPRHPPGPL
LLLFGGGSVHHLPLAASGSARLAELAERSPLGPLAQRPRPTWAAPLAPVDHLDRGLGRES
QRRGRQAEGRDHGLSPDHWAERHTEVFMDIVDTFNHLIPTEHLDDALFLGSNLENEVCED
FSASQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGV
VKESGNDTIDEEELILPNRNLRDKVEENSVRSPRKSPRLMAQX

>gi568815592f:63476881_63680171|GENSCAN_predicted_CDS_9|1209_bp
atgatttcctcaatgtctggcttaatagaagatggctggattctcttatctgtttctgca
ttgaatcagctgctatatgctgttttggttgaagggtgggaagaaaatttggccttagac
acatgctcctggcaaaggaatggaggctctactgaaaggtcttggcgacccctcagggaa
acctgggaccacattctgaagactgcttactggataccaagaatgtttcttggaggtagc
aatttgagtcctgaggtagatcagccatgtagggtgagggtaacggaggtagttaatgct
cccgcgccgccgccgcacgccgatggctgcggggtctcgcgccgtcgcaccgtccccacg
cggcaagcgaccttcgggctcagggcggcggcggctgcaacgaggattaggagggcggcg
cggaagccaagaatagtgtcgtcagcagcagccatttggtcccaggaggaaaagaggctg
tggcagcgacgccgacgtcctgcgcgtaccccctctccgcggcacccaccgggccccctc
ctcctcctcttcggcggcggcagcgtccaccatcttcctcttgctgccagtggtagcgct
cgtctggcggagctggccgagagatcgcctctcgggcctcttgcgcaacgtcctcggcct
acctgggccgcgccgctggcgcctgtggaccatttggaccgcgggctggggagggagtcg
cagcgacgcggtcgccaggcggagggtcgggaccacggcctctctcccgaccactgggct
gaaagacacacagaagtcttcatggatatagttgatacatttaatcatttaattcctact
gaacacttagatgatgccctatttctaggatccaacctggagaatgaagtctgtgaggat
tttagtgcaagtcaaaatgtcttagaggactcgctgaagaacatgctcagcgataaggat
cctatgctaggatctgcaagtaaccagttctgtttgcctgttttggatagcaatgatccc
aatttccagatgccttgttcaacagttgttggtcttgacgatattatggatgaaggagtt
gttaaagaaagtggcaatgataccattgatgaagaagaactgattttacctaacaggaac
ttaagggacaaggtagaagaaaattcagtgagatctccaagaaaatcacctcgtttaatg
gcacaagnn