GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:16:25

Sequence gi568815589r:125049676_125289718 : 240043 bp : 43.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   7191   7230   40                              -3.16
 1.01 Init +   9666   9720   55  2  1   56   95    47 0.494   3.65
 1.02 Intr +  52747  52854  108  2  0   99  100    81 0.934  10.66
 1.03 Term +  91921  91967   47  2  2   98   42    79 0.498   1.67
 1.04 PlyA +  92245  92250    6                               1.05

 2.09 PlyA -  92261  92256    6                               1.05
 2.08 Term - 100246  99998  249  1  0   50   54   185 0.856   7.00
 2.07 Intr - 104067 103858  210  0  0   73   88   134 0.902  11.01
 2.06 Intr - 104310 104231   80  1  2  133   87    39 0.999   7.57
 2.05 Intr - 108707 108566  142  2  1   69   95    34 0.871   2.13
 2.04 Intr - 121505 121410   96  2  0   93   98    60 0.954   7.71
 2.03 Intr - 139634 139515  120  2  0   94   17    78 0.185   1.99
 2.02 Intr - 140159 139969  191  0  2   12  105   332 0.640  26.60
 2.01 Init - 146048 145685  364  2  1   33   39   178 0.028   4.61
 2.00 Prom - 150473 150434   40                              -4.56

 3.00 Prom + 153256 153295   40                              -2.96
 3.01 Init + 153339 153391   53  2  2  100   26    34 0.804  -0.97
 3.02 Intr + 157889 158046  158  2  2  117   86   134 0.985  15.75
 3.03 Intr + 163695 163847  153  1  0   26  119   120 0.925   8.94
 3.04 Intr + 170864 171025  162  0  0   60   27   141 0.660   5.15
 3.05 Intr + 178199 178384  186  0  0   72   71    91 0.630   5.46
 3.06 Intr + 182921 183070  150  0  0  114   99   103 0.986  14.13
 3.07 Term + 184013 184305  293  0  2   62   38   145 0.636   2.41
 3.08 PlyA + 184869 184874    6                              -0.45

 4.08 PlyA - 185839 185834    6                               1.05
 4.07 Term - 187479 186917  563  1  2   80   42   702 0.999  59.34
 4.06 Intr - 188633 188466  168  0  0   68   86   101 0.994   7.82
 4.05 Intr - 189152 188915  238  2  1   83   96   283 0.921  25.79
 4.04 Intr - 189656 189266  391  1  1   54   80   549 0.999  45.43
 4.03 Intr - 189858 189746  113  0  2   96   97    87 0.999   9.58
 4.02 Intr - 191232 191001  232  2  1   57   58   574 0.526  49.08
 4.01 Init - 191451 191330  122  0  2   95  119   395 0.592  40.96
 4.00 Prom - 213053 213014   40                              -4.76

 5.02 PlyA - 213123 213118    6                               1.05
 5.01 Sngl - 214478 214140  339  2  0   31   37   367 0.893  21.93
 5.00 Prom - 235562 235523   40                              -2.36


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:125049676_125289718|GENSCAN_predicted_peptide_1|69_aa
MPDSPLDPSAVKDVIETTVLLFHKDQLLLQPPPVHWIPVPLASDHNFTISYSLPSSTIRV
NYTVSNDKR

>gi568815589r:125049676_125289718|GENSCAN_predicted_CDS_1|210_bp
atgcctgattctcccctggatccttctgctgtaaaggatgttattgagacaactgtcctc
ctctttcataaagatcagctgctcctccagccaccacctgtgcactggattccagtccca
cttgcctctgaccacaacttcaccatcagctactccctgcccagttcaaccattcgagtt
aactacacagtgtccaacgacaaaagataa

>gi568815589r:125049676_125289718|GENSCAN_predicted_peptide_2|483_aa
MEQYIYKRKSDGIYIINLKRTWEKLLLAAHAIVAIENPADASVISPRNTGQRVVLKFAAA
TRATPVAGHFTPGTFTNQIQAPSGSHSFLWLLTPGLTTSLKQRHLMLTYLPLLCVIQILL
CSATHGPDVTQGKFRLRPPPLPPPLLQPPPPLLPRLVILKMAPLDLDKYVEIARLCKYLP
ENDLKSEPSPRGSALGMGSPPPEVTGARSGRRLTGDATGYRNAASRLCDYVCDLLLEESN
VQPVSTPVTVCGDIHGQGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQV
YGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERN
QEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHE
GYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTP
YFL

>gi568815589r:125049676_125289718|GENSCAN_predicted_CDS_2|1452_bp
atggaacagtacatctataaaaggaaaagtgatggcatctacatcataaatctgaagagg
acctgggagaagcttctgctggcagctcatgccattgttgccattgaaaaccctgctgat
gccagtgttatatcccctaggaatactggccagagggttgtgctgaagtttgctgctgcc
accagagccactccagttgctggccacttcactcctggaaccttcactaaccagatccag
gctccttccgggagccacagctttttgtggttactgaccccagggctgaccaccagcctc
aaacagaggcatcttatgttaacctacctaccattgctctgtgtaatacagattctcctc
tgcagcgccactcacgggccggacgtgacgcagggaaagttccggcttcggcctccgccg
ctgccgccgccgctgctacagccgccgccgccgctgttgccgcggcttgttattcttaaa
atggcgccgctagacctggacaagtatgtggaaatagcgcggctgtgcaagtacctgcca
gagaacgacctgaagtcggagccgagcccccgcggcagtgccctcgggatggggtcgcct
ccaccggaggtgacaggagcgcggagtggccggcgtctgacaggagatgccaccggctac
cggaacgcggcctcacggctatgtgactacgtttgtgacctcctcttagaagagtcaaat
gttcagccagtatcaacaccagtaacagtgtgtggagatatccatggacagggtgatttt
gtagacagaggttactatagtttggagaccttcacttaccttcttgcattaaaggctaaa
tggcctgatcgtattacacttttgcgaggaaatcatgagagtagacagataacacaggtc
tatggattttatgatgagtgccaaaccaaatatggaaatgctaatgcctggagatactgt
accaaagtttttgacatgctcacagtagcagctttaatagatgagcagattttgtgtgtc
catggtggtttatctcctgatatcaaaacactggatcaaattcgaaccatcgaacggaat
caggaaattcctcataaaggagcattttgtgatctggtttggtcagatcctgaagatgtg
gatacctgggctatcagtccccgaggagcaggttggctttttggagcaaaggtcacaaat
gagtttgttcatatcaacaacttaaaactcatctgcagagcacatcaactagtgcacgaa
ggctataaatttatgtttgatgagaagctggtgacagtatggtctgctcctaattactgc
tatcgttgtggaaatattgcttcgatcatggtcttcaaagatgtaaatacaagagaacca
aagttattccgggcagttccagattcagaacgtgttattcctcccagaacgacaacgcca
tatttcctttga

>gi568815589r:125049676_125289718|GENSCAN_predicted_peptide_3|384_aa
MKQLPVLEPGDKPRKATWYTLTVPGDSPCARVGHSCSYLPPVGNAKRGKVFIVGGANPNR
SFSDVHTMDLGKHQWDLDTCKGLLPRYEHASFIPSCTPDRIWVFGGANQSGNRNCLQVLN
PETRTWTTPEVTSPPPSPRTFHTSSAAIGNQLYVFGGGERGAQPVQDTKLHVFDAILPFD
VIEFTFLDTLTWSQPETLGNPPSPRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCIDISDM
KWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQHWTLLKFDTL
LPPGRLDHSMCIIPWPVTCASEKEDSNSLTLNHEAEKEDSADKVMSHSGDSHEESQTATL
LCLVFGGMNTEGEIYDDCIVTVVD

>gi568815589r:125049676_125289718|GENSCAN_predicted_CDS_3|1155_bp
atgaagcaactgccagtcttggaacctggagacaagcccaggaaagcaacatggtacacc
ttgactgtccctggagacagcccctgtgctcgagttggccacagctgttcatatttaccc
ccagttggtaatgccaagagagggaaggtcttcattgttgggggagcaaatccaaacaga
agcttctcagacgtgcacaccatggatctgggaaaacaccagtgggacttagatacctgc
aagggcctcttgccccggtatgaacatgctagcttcattccctcctgcacacctgaccgt
atctgggtatttggaggtgccaaccaatcaggaaatcgaaattgtctacaagtcctgaat
cctgaaaccaggacgtggaccacgccagaagtgaccagccccccaccatccccaagaaca
ttccacacatcatcggcagccattggaaaccagctatatgtctttgggggcggagagaga
ggtgcccagcccgtgcaggacacgaagctgcatgtgtttgacgcaattttgccatttgat
gttattgaatttacttttctagacactctgacctggtcacagccagagacacttggaaat
cctccatctccccggcatggtcatgtgatggtggcagcagggacaaagctcttcatccac
ggaggcttggcgggggacagattctatgatgacctccactgcattgatataagtgacatg
aaatggcagaagctaaatcccactggggctgctccagcaggctgtgctgcccactcagct
gtggccatgggaaaacatgtgtacatctttggtggaatgactcctgcaggagcactggac
acaatgtaccagtatcacacagaagagcagcattggaccttgcttaaatttgatactctt
ctaccccctggacgattggaccattccatgtgtatcattccatggccagtgacgtgtgct
tctgagaaagaagattccaactctctcactctgaaccatgaagctgagaaagaggattca
gctgacaaagtaatgagccacagtggtgactcacatgaggaaagccagactgctacactg
ctctgtttggtgtttggtgggatgaatacagaaggggaaatctatgacgattgtattgtg
actgtagtggactaa

>gi568815589r:125049676_125289718|GENSCAN_predicted_peptide_4|608_aa
MKLSLVAAMLLLLSAARAEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNR
ITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVT
HAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLG
GGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQ
KLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVL
EDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLS
GDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVY
EGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITI
TNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKL
SSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLYGSAGPPPTGEE
DTAEKDEL

>gi568815589r:125049676_125289718|GENSCAN_predicted_CDS_4|1827_bp
atgaagctctccctggtggccgcgatgctgctgctgctcagcgcggcgcgggccgaggag
gaggacaagaaggaggacgtgggcacggtggtcggcatcgacctggggaccacctactcc
tgcgtcggcgtgttcaagaacggccgcgtggagatcatcgccaacgatcagggcaaccgc
atcacgccgtcctatgtcgccttcactcctgaaggggaacgtctgattggcgatgccgcc
aagaaccagctcacctccaaccccgagaacacggtctttgacgccaagcggctcatcggc
cgcacgtggaatgacccgtctgtgcagcaggacatcaagttcttgccgttcaaggttacc
catgcagttgttactgtaccagcctattttaatgatgcccaacgccaagcaaccaaagac
gctggaactattgctggcctaaatgttatgaggatcatcaacgagcctacggcagctgct
attgcttatggcctggataagagggagggggagaagaacatcctggtgtttgacctgggt
ggcggaaccttcgatgtgtctcttctcaccattgacaatggtgtcttcgaagttgtggcc
actaatggagatactcatctgggtggagaagactttgaccagcgtgtcatggaacacttc
atcaaactgtacaaaaagaagacgggcaaagatgtcaggaaagacaatagagctgtgcag
aaactccggcgcgaggtagaaaaggccaaacgggccctgtcttctcagcatcaagcaaga
attgaaattgagtccttctatgaaggagaagacttttctgagaccctgactcgggccaaa
tttgaagagctcaacatggatctgttccggtctactatgaagcccgtccagaaagtgttg
gaagattctgatttgaagaagtctgatattgatgaaattgttcttgttggtggctcgact
cgaattccaaagattcagcaactggttaaagagttcttcaatggcaaggaaccatcccgt
ggcataaacccagatgaagctgtagcgtatggtgctgctgtccaggctggtgtgctctct
ggtgatcaagatacaggtgacctggtactgcttgatgtatgtccccttacacttggtatt
gaaactgtgggaggtgtcatgaccaaactgattccaaggaacacagtggtgcctaccaag
aagtctcagatcttttctacagcttctgataatcaaccaactgttacaatcaaggtctat
gaaggtgaaagacccctgacaaaagacaatcatcttctgggtacatttgatctgactgga
attcctcctgctcctcgtggggtcccacagattgaagtcacctttgagatagatgtgaat
ggtattcttcgagtgacagctgaagacaagggtacagggaacaaaaataagatcacaatc
accaatgaccagaatcgcctgacacctgaagaaatcgaaaggatggttaatgatgctgag
aagtttgctgaggaagacaaaaagctcaaggagcgcattgatactagaaatgagttggaa
agctatgcctattctctaaagaatcagattggagataaagaaaagctgggaggtaaactt
tcctctgaagataaggagaccatggaaaaagctgtagaagaaaagattgaatggctggaa
agccaccaagatgctgacattgaagacttcaaagctaagaagaaggaactggaagaaatt
gttcaaccaattatcagcaaactctatggaagtgcaggccctcccccaactggtgaagag
gatacagcagaaaaagatgagttgtag

>gi568815589r:125049676_125289718|GENSCAN_predicted_peptide_5|112_aa
MKFSFVYTVILSAFNDSNVLLKNQIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLH
VMKAMQSLKSQGYMKEQFAWRHFYWYLTNEGIQYLRDYLHLPPGDCTCYPTP

>gi568815589r:125049676_125289718|GENSCAN_predicted_CDS_5|339_bp
atgaaattctctttcgtctacactgtcatcctgtctgccttcaatgattcaaatgttctt
ctaaagaaccagattgccatttatgaactcctttttaaggagggagtcatggtggccaag
aaggatgtccacatgcctaagcacccagagctggcagacaagaacgtgcccaaccttcat
gtcatgaaggccatgcagtctctcaagtctcaaggctacatgaaggaacagtttgcctgg
agacatttctactggtaccttaccaatgagggtatccagtatctccgggattaccttcat
ctgccccccggagactgtacctgctaccctacgccatag