GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:13:02

Sequence gi568815591f:4957287_5165598 : 208312 bp : 47.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -    906    744  163  2  1   74   89    29 0.016   1.58
 1.04 Intr -   1788   1685  104  0  2   87   83   124 0.016  10.77
 1.03 Intr -  17003  16723  281  0  2   45   11   214 0.248   6.60
 1.02 Intr -  17401  17279  123  2  0   51   48    90 0.601   1.86
 1.01 Init -  19039  18991   49  1  1   85   61    32 0.593   1.31
 1.00 Prom -  23320  23281   40                              -3.26

 2.00 Prom +  23831  23870   40                              -5.56
 2.01 Init +  27706  27789   84  0  0   64   73   100 0.531   6.92
 2.02 Intr +  29281  29345   65  0  2   43   94    42 0.579  -2.18
 2.03 Intr +  36334  36527  194  1  2   59   65   285 0.711  22.44
 2.04 Intr +  39324  39512  189  1  0  139   47   124 0.488  12.96
 2.05 Intr +  52599  52669   71  1  2  -18   92   112 0.004  -0.10
 2.06 Term +  53905  53946   42  0  0  100   47    42 0.151  -1.54
 2.07 PlyA +  54656  54661    6                               1.05

 3.03 PlyA -  55695  55690    6                               1.05
 3.02 Term -  59342  59174  169  1  1   69   43   163 0.408   7.25
 3.01 Init -  63535  63501   35  1  2   56   83    29 0.251  -1.46
 3.00 Prom -  71115  71076   40                              -4.76

 4.06 PlyA -  72055  72050    6                               1.05
 4.05 Term -  73419  73315  105  0  0  110   43    77 0.994   3.81
 4.04 Intr -  74672  74504  169  1  1   75   90   192 0.663  18.05
 4.03 Intr -  76765  76680   86  1  2   84   65    13 0.358  -2.78
 4.02 Intr -  78048  77990   59  1  2   87   78    37 0.285   1.20
 4.01 Init -  80545  80437  109  1  1   70   94    88 0.482   7.98
 4.00 Prom -  81449  81410   40                              -6.66

 5.00 Prom +  82614  82653   40                              -7.16
 5.01 Init +  82979  82988   10  1  1   83   85    12 0.467   0.85
 5.02 Intr +  90747  90805   59  1  2  155  109    30 0.727  10.40
 5.03 Intr + 100009 100135  127  0  1   76   72   116 0.975   9.05
 5.04 Intr + 100398 100493   96  1  0   99  111    54 0.940   8.78
 5.05 Term + 106409 108315 1907  0  2   78   45  1372 0.050 117.26
 5.06 PlyA + 108736 108741    6                               1.05

 6.04 PlyA - 109287 109282    6                               1.05
 6.03 Term - 114889 114746  144  1  0   75   38    88 0.881   0.41
 6.02 Intr - 115228 115061  168  1  0  103   86   232 0.903  24.64
 6.01 Init - 121714 121712    3  1  0  113   81     0 0.578   1.80
 6.00 Prom - 135255 135216   40                              -5.16

 7.00 Prom + 135474 135513   40                              -2.66
 7.01 Init + 149840 149842    3  1  0   90   64     0 0.142  -2.20
 7.02 Intr + 151654 151746   93  0  0   89   98    34 0.405   4.66
 7.03 Intr + 159458 159497   40  1  1   83   92     1 0.351  -2.20
 7.04 Intr + 159833 160275  443  0  2  112  -48   712 0.999  53.17
 7.05 Term + 160355 160918  564  1  0   70   35   890 0.984  76.29
 7.06 PlyA + 162926 162931    6                               1.05

 8.05 PlyA - 163491 163486    6                              -0.45
 8.04 Term - 164065 163953  113  2  2   79   49   195 0.571  13.42
 8.03 Intr - 164937 164602  336  1  0   71    0   221 0.496   7.09
 8.02 Intr - 169639 169544   96  2  0   80   99    67 0.984   6.98
 8.01 Init - 170562 170331  232  0  1   59   68   340 0.972  27.52
 8.00 Prom - 171641 171602   40                              -7.46

 9.07 PlyA - 171775 171770    6                               1.05
 9.06 Term - 174057 173912  146  1  2   -2   44   121 0.270  -3.23
 9.05 Intr - 175203 175162   42  1  0  121  109    40 0.660   7.61
 9.04 Intr - 179403 179269  135  1  0   84  115    24 0.621   5.24
 9.03 Intr - 179601 179575   27  1  0  101   86    12 0.516   0.39
 9.02 Intr - 187034 186961   74  1  2  123   88    84 0.941  10.95
 9.01 Intr - 187258 187091  168  0  0   34   72   120 0.844   4.06

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 145767 145603  165  0  0   77   47   130 0.831   2.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_1|240_aa
MVTICFKRAEKEAKRNTPGPPSRASPQRPAERSDALAAPSRVPGDSRQVSRNNTRSRSLW
CSRPAPPPPPPQLNGGVTQGGRLASQTRPEARARPAADTHSPLNSPASQAGSATFATTPL
TPPKLQLRAPWQPLHSFRPCPGVTSRKRTARALPATRALSPGPDSHGSAAMFAPRLLDFQ
KTKYASGLRRAQTRLLGAARGGLFGGGTRLSSRSPFPLCHLGSPAFVNRGAWCVLRLQWV

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_1|720_bp
atggtgaccatctgtttcaaaagagctgaaaaggaagcaaagaggaacacgcccggaccc
ccgagccgggccagcccccagcgccccgcagaaaggtctgacgcacttgcggcgccctcg
cgagtgccgggtgacagtcgccaagtttcacggaacaacacgcgctccagatctctgtgg
tgctcacggcccgcgcccccgcccccacccccgcagctcaacggaggcgtcacgcaggga
ggccgcctcgcctcacagacccgcccagaagctcgagcgcgccccgcagccgacactcac
tcgccactcaactcgccggctagccaggcgggttcggcgaccttcgctaccacgccgctt
actcctccaaagctgcagctacgagctccgtggcagccgctgcattccttccggccctgc
cccggcgtcacctcgcgcaagcgtacagcgcgcgctctgccagctacccgcgctctgagc
ccggggccagattcccatggaagcgccgcgatgttcgccccccggctgctggatttccag
aagacgaaatacgcgagtggtcttcggcgagcacagacccgtctgctgggagcagcccgc
gggggcctctttggagggggcaccaggctgtcctccaggtcacctttccccctctgccac
ctggggtcccctgccttcgtgaacagaggggcctggtgtgtgctgaggctccagtgggtg

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_2|214_aa
MADFKVLSSQDIMWALHELKGHYAITRKDFESHQHMENLTSQDEVPRDTRCMQERGQGLL
VWQQEEPSEFDLAYANFLSLDISMLRLFETLETAPQLTLVLAIMLQSGWAEYYQWVGICT
SFLGISWALLDYHQALHTCLPSKPLLGLGSSVIYVLWNLLLLWPRVLAVALFSALFPNRP
VEQNKERGNKAKYYSQQIIDKMCLEEGDNCLLDC

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_2|645_bp
atggccgacttcaaagtgctcagtagtcaggacatcatgtgggccctgcacgagctcaaa
ggacactatgcaatcacccgaaaggactttgagagtcatcagcatatggaaaatctcacc
agccaggatgaggtacccagagataccaggtgcatgcaggagcgggggcaggggctgctg
gtgtggcagcaggaggagccctctgagtttgacttggcctacgccaatttcctctccctg
gatatcagcatgctgcggctctttgagaccttggagacggcaccacagctcacgctggtg
ctggccatcatgctgcagagtggctgggctgagtactaccagtgggttggcatctgcaca
tccttcctgggcatctcgtgggcactgctcgattaccaccaggccttgcacacctgcctc
ccctccaagcccctcctgggcctgggctcctctgtgatctacgtcctgtggaacctgctg
ctactgtggccccgagtcctagctgtggccctgttctcagccctcttccccaacagacca
gtggaacagaataaagagcgcggaaataaagccaaatactacagccaacagatcatcgac
aagatgtgcctagaagaaggagacaactgcctcttggactgttga

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_3|67_aa
MRERYRERKTRCQGSTIQKNLAREDWQTDINVMPMAPGGFRYLLVLTDIFTSYTGAFPCQ
TENAGDH

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_3|204_bp
atgagggaaagataccgagagaggaaaaccaggtgccaaggcagtacaattcagaagaac
cttgccagggaagactggcaaacggacatcaacgtgatgcctatggctcctggaggattt
agatacctcctggtgctcactgatatcttcaccagttacacgggggcttttccatgccag
actgaaaatgcaggagatcactga

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_4|175_aa
MTSHQPHLQDEEQSPQPSASGYPLQEVVDDDMSGPSEDPVVKRLLVWDKDLRVSDKYLLA
MVIAYSSPASLFSWQYQRIHFFLALYLTNDMEEDSETPKQNIFYFLYGKNCSQIALSHKL
WFQFFHSVRCRAWVFPEELEENAGPRGDADFHQELYSNANGRHQEEGEEPFVQII

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_4|528_bp
atgaccagccatcaaccacacctccaggatgaggagcagagcccccagcccagcgcctcg
gggtaccccctccaggaggtggtggatgatgacatgtcaggaccatcagaggatcctgtc
gttaaaagactcctggtctgggacaaagatctgagggtgtcggacaaatatctcctggct
atggtcatagcgtattctagcccggccagcctcttctcctggcaataccaacgcattcat
ttcttcctggctctctacctgaccaatgacatggaggaggacagcgagacccccaaacaa
aacatcttctacttcctgtacgggaagaactgctctcagatagccttgtcccacaagctt
tggttccagttcttccattccgtgcgctgcagggcttgggttttcccggaggagttggag
gagaatgctgggcccaggggagatgcggattttcatcaggaactttattccaatgctaat
ggcaggcaccaggaagaaggagaggagccatttgtgcagatcatctag

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_5|732_aa
MAAGLPATVSARFQEQQKMNTLQGPVSFKDVAVDFTQEEWQQLDPDEKITYRDVMLENYS
HLVSVGYDTTKPNVIIKLEQGEEPWIMGGEFPCQHSPEAWRVDDLIERIQENEDKHSRQA
ACINSKTLTEEKENTFSQIYMETSLVPSSIIAHNCVSCGKNLESISQLISSDGSYARTKP
DECNECGKTYHGEKMCEFNQNGDTYSHNEENILQKISILEKPFEYNECMEALDNEAVFIA
HKRAYIGEKPYEWNDSGPDFIQMSNFNAYQRSQMEMKPFECSECGKSFCKKSKFIIHQRA
HTGEKPYECNVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGE
KPYECSECGKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGEKLYK
CNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECNEC
GKTFNLNSAFIRHRKVHTEEKSHECSECGKFSQLYLTDHHTAHLEEKPYECNECGKTFLV
NSAFDGHQPLPKGEKSYECNVCGKLFNELSYYTEHYRSHSEEKPYGCSECGKTFSHNSSL
FRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHY
RSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHR
RGNMNVLDVENL

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_5|2199_bp
atggctgcaggtctaccagccacagtctctgcacgtttccaagagcagcagaaaatgaac
acattgcaggggccagtgtcattcaaagatgtggctgtggatttcacccaggaggagtgg
cagcagctggaccctgatgagaagataacttacagggatgtgatgttggagaactatagc
catctagtttctgtgggatatgataccaccaagccaaacgtcatcattaagttggagcag
ggagaggagccgtggataatgggaggtgaatttccatgtcaacatagtccagaagcctgg
agagttgatgacctgatagagagaatccaagaaaacgaagacaaacattcaaggcaagct
gcttgtatcaatagcaaaaccctgactgaagagaaagagaatacatttagtcaaatttac
atggaaacaagccttgttccttcaagcataatagctcataattgtgtctcatgtggaaag
aatttagaatctatttcgcaattaattagtagtgatggaagctatgctaggacaaaacct
gatgagtgtaatgaatgtgggaaaacatatcatggagagaaaatgtgtgaatttaatcaa
aatggggatacctattctcacaatgaagaaaatattcttcagaaaattagtattttggag
aaaccctttgaatataatgaatgcatggaagccttagacaatgaggctgtttttattgct
cataagagagcttacataggggagaagccctatgagtggaatgattctggaccagacttc
atacagatgtcaaattttaatgcatatcagagatcacaaatggaaatgaagccctttgaa
tgcagtgaatgtggaaaatccttctgtaaaaagtcaaaattcatcatccaccagagggct
cacacaggagagaaaccttatgaatgtaatgtatgtgggaaatccttcagccaaaaggga
accctcactgtacatcggagatcacacttagaggagaagccctataaatgtaatgaatgt
gggaaaaccttttgtcagaagttacacctcactcaacacctaagaactcattcaggagag
aaaccctacgaatgtagcgaatgtgggaaaaccttctgccaaaagacacatctcaccctg
caccagaggaatcattcaggagagaggccctatccatgtaacgaatgtgggaaatccttc
tcccgcaagtctgctctcagtgaccatcagagaactcacacgggagagaagctttataaa
tgtaatgaatgtgggaaatcctactaccgaaagtctactctgattacacatcagagaaca
cacacgggagagaagccctatcagtgtagcgagtgtgggaaattcttttctcgggtgtca
tacctcactatacattatagaagtcatttagaagagaaaccctatgaatgtaatgaatgt
ggcaaaaccttcaatttaaattcagccttcattagacatcggaaagtacacacagaagag
aaatcccatgaatgtagtgaatgtggaaagttctctcagttgtatctcaccgaccatcat
acagctcatttagaagagaaaccctatgaatgtaatgaatgtgggaaaaccttccttgta
aattcagccttcgatgggcaccagccacttccaaaaggggagaaatcctatgaatgtaat
gtatgtggaaagttattcaatgagttgtcatactatactgaacattatagaagtcattca
gaagagaaaccttatggatgtagcgaatgtgggaaaaccttttcccataattcatccctc
ttcagacatcaaagagtacacacaggcgagaaaccctatgaatgttacgaatgtggaaaa
ttcttctctcagaaatcatatctcactatacatcatcgaattcattcaggagagaaaccc
tatgaatgtagtaaatgtggaaaagtcttctctcggatgtcaaacctcactgtccactac
agaagccattcaggagagaaaccctatgaatgtaatgaatgtgggaaagtcttttctcag
aagtcatacctcactgtacactatagaactcattcaggagagaaaccctatgaatgtaac
gagtgtgggaaaaaattccaccacagatcagccttcaatagccatcagagaattcataga
agaggaaatatgaacgtacttgatgtggaaaatctctga

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_6|104_aa
MHGAVETLEQVLKAFLGVSIRVGSGFGGGDRGGREQQQQQQQRGPHGLRAGRLSGDKGLL
DPDSSAPELPWSSDASTSLSHALEPEPRPPTVNASPKPLRMTTP

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_6|315_bp
atgcatggggcggttgaaaccttggagcaggttctgaaggccttcctgggtgttagcatc
cgggtggggagcggctttggcggtggggaccggggcggccgggagcagcagcagcagcag
caacagcgggggccacatggcctgcgggcagggcggctgtcgggggacaagggattgtta
gatccggacagttctgccccagagctgccctggagctcggacgcctccacgagcctgagc
cacgccctcgagcccgagccacgcccgcccactgttaacgcctcacccaaacccctacgc
atgaccacgccctag

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_7|380_aa
MAKTKARLLPQGTGKFDLGALSVATALEFLIKAGNQDACLPRYGRDPNASCWPESNGTAL
QEFVILGFSVWPPGLRVLLFVLFLPLYLVTLAGNLLILGLALVDPALHSPMYFFLGALSA
AQAAYTLVLTPRMLAGFLLPSRGQAVDPSTCAAQMGLFVALGGSECLLLAAMALDRYLAI
CHPLCYPRLMTMDLPFCRGGLVNHVFCDLPAVLVLACGCRALQERVLLVACLLLLVLPLL
LILLSYTRVLVVILGVGGVAGRRKAFNTVASHLTVAVLHYGCATAMYARPLNSRSLEEDK
LVSLIYINVTPLLYPAIYTLRNRDMQEALQCMVGQRTLGMATRWILPDAGCQAVSVLRFL
PLRGISPFWSHLSLPNAYGV

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_7|1143_bp
atggcgaagacaaaagctaggctcctgcctcagggaactggaaaatttgatcttggggca
ctctcagtggccacagcccttgagttcctcatcaaggctgggaaccaggatgcctgcctt
cctaggtatggacgagaccccaacgcgagctgctggcctgagtccaatgggacagccctg
caggagttcgtgatcctgggcttctccgtgtggcccccggggctccgcgtgctgctcttc
gtcctcttcttgccgctctacctggtcaccctggcggggaacctactgatcctgggcctg
gccctggtggaccccgccctgcactcgccaatgtacttcttcctgggggcgctgtccgcg
gcgcaggcagcctacacgctggtgctcacgccacgcatgctggccggcttcctcctgccc
tccaggggccaggctgtggacccctctacctgcgccgcccagatgggcctcttcgtggcc
ctggggggctccgagtgcctgctgctggctgccatggccctagaccgctacctggctatc
tgccatccactctgctaccctcggctcatgaccatggacctgcccttctgccgcggcggc
ctggtcaaccacgtcttctgcgacctcccggccgtgctggtgctggcctgcgggtgccgg
gccctgcaggagcgcgtcctcctggtggcctgcctgctgctgctggtgctacccctgctc
ctcatcctgctctcctacacccgggtgctggtggtcatcctgggtgttgggggggtcgcg
ggccgccgcaaggccttcaacacggtggcgtcccacctcaccgtggctgtgctccactac
ggctgtgccacggccatgtatgccaggcccctgaacagccgttcccttgaggaggacaag
ctggtctcgctcatctatatcaacgtcaccccgctgctgtacccggccatctacacgctg
cggaaccgggacatgcaggaggccctgcaatgcatggtcggccagaggacgctggggatg
gccaccaggtggattttgcctgatgctgggtgccaggcggtgtctgtcctgagatttctc
ccactgaggggaatctcaccattctggagccatctaagcctccccaacgcctacggggtg
taa

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_8|258_aa
MGKADVGRFKINLLYAFAMVPSANHSTLISHVLFQGSLSFGDVAVGFTRKEWQQLDLEQR
TLYQDVMLEIYSHLLSVGCQVSKPAVISSLEQGKEPWMEEEEIRTWSFPEEVWQVATQPD
SQQQHEDQHLSHTFLDKKDWTGNELHECNELGKKLHQNPNLLPSKQQVRTRDLCRKSLMC
NLDFTPNAYLARRRFQCDGHGNFSIRNLKLHLQERIHAEVTSGLAGKKPYECSDCGKTSR
KANLIRHHGIHTREKLHG

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_8|777_bp
atggggaaagctgacgtcggaaggtttaagatcaatctcctctacgcctttgccatggta
cccagtgccaaccactccacattaatcagccatgtgctgttccaggggtcactgtcattc
ggggacgtggctgtgggcttcacccggaaagagtggcagcagctggacctggagcagagg
accctgtaccaggatgtgatgctggagatctacagccacctgctctctgtggggtgtcaa
gtcagcaaaccagctgtgatctccagtttggagcaggggaaggagccatggatggaggag
gaagagataaggacgtggagcttcccagaagaagtttggcaagttgctacccagccagat
agccaacagcaacacgaagaccaacatttgagccatacgtttctagacaagaaagactgg
accggaaatgagcttcatgaatgtaacgaacttggaaaaaaactccatcagaacccaaac
ctccttccatcaaaacagcaggtccgcacacgtgacttgtgcagaaagagtttgatgtgt
aacctggacttcactcctaacgcctacctggcgaggaggagatttcagtgcgacggccac
ggaaacttctctattcgaaacttgaaactccaccttcaggagcgaatccacgcggaggtc
accagcggactcgcggggaagaaaccgtacgagtgctccgactgcgggaagacctcccgg
aaggcgaacctcatccgccaccacgggatccacacgagggagaagctgcatgggtga

>gi568815591f:4957287_5165598|GENSCAN_predicted_peptide_9|197_aa
XHVWEERRLGSRAVRSASVAGTHLLQSRHCTGVLGAAPPDVSAGCRVLPSWAGGRHSSAS
SDPTVPWKLAQGTCHCDHLDADWFLSISGKGFPGVFAKAQDRTLSARWVPPLSIASLFLP
WSREPQRLKLESPPEGVCFSRIEKKNYGPGLQRQPCAVPSDLDVTLHYLEERMNELRVLE
TACHVYRHTTLNVPDLI

>gi568815591f:4957287_5165598|GENSCAN_predicted_CDS_9|594_bp
nnacacgtgtgggaggaacggcgtcttggctcccgggctgtgcgcagcgccagcgtggcc
ggcacccacttgctgcagagccggcactgcactggggtcctgggggcggctcctccagac
gtctccgcgggttgtcgggtgctgccaagttgggctgggggacgccacagctctgcctcc
tcggaccccaccgtcccctggaagctcgcgcagggcacctgccactgtgaccacttggac
gcggattggtttctctctatcagcggtaaaggttttcctggtgtctttgcaaaagctcag
gatcggactttgtcagcaaggtgggtccctcctctcagcatagcaagcttgtttctaccc
tggtcccgagaacctcagaggctgaagcttgagtccccacctgaaggtgtctgcttttcc
agaatagagaagaagaactatggcccaggtctacagagacagccttgtgcggtgccaagt
gacctggatgtaacactgcattatctagaggaacgaatgaatgaactgcgtgttcttgaa
acagcctgccatgtctaccgccacaccaccctgaacgtgcctgatctcatctga