GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:30:58

Sequence gi568815577f:29221281_29442830 : 221550 bp : 39.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    524    519    6                              -0.45
 1.02 Term -   1575   1162  414  0  0   38   33   340 0.877  17.78
 1.01 Init -   1885   1694  192  1  0   78   55   175 0.459  12.21
 1.00 Prom -  23441  23402   40                              -3.05

 2.06 PlyA -  23730  23725    6                               1.05
 2.05 Term -  32094  31666  429  0  0   46   41   241 0.775   9.52
 2.04 Intr -  35400  35292  109  2  1   74  109    57 0.292   5.77
 2.03 Intr -  42773  42666  108  1  0  119   67     8 0.012   0.28
 2.02 Intr -  54701  54561  141  1  0   42   23   144 0.013   1.85
 2.01 Init -  63215  63130   86  2  2   58   63    83 0.102   3.14
 2.00 Prom -  71703  71664   40                              -3.25

 3.03 PlyA -  71790  71785    6                               1.05
 3.02 Term -  76971  76685  287  1  2   26   47   316 0.532  15.88
 3.01 Init -  79688  79637   52  2  1   64   68    59 0.456   2.87
 3.00 Prom -  94285  94246   40                              -3.75

 4.00 Prom +  99318  99357   40                              -3.45
 4.01 Init + 100001 100234  234  1  0   47   78   282 0.842  21.29
 4.02 Intr + 104779 106113 1335  0  0   75   83  1099 0.999  95.41
 4.03 Intr + 108207 108413  207  2  0   76  119   223 0.995  22.55
 4.04 Term + 121119 121553  435  2  0   59   37   228 0.962   9.10
 4.05 PlyA + 124544 124549    6                               1.05

 5.08 PlyA - 126687 126682    6                               1.05
 5.07 Term - 134502 134370  133  2  1  101   37   113 0.502   4.08
 5.06 Intr - 136805 136402  404  2  2  100   69   189 0.759  10.50
 5.05 Intr - 139074 138798  277  2  1   78   71    65 0.129   0.40
 5.04 Intr - 143156 143060   97  0  1   93   39   104 0.183   4.15
 5.03 Intr - 154160 154100   61  2  1   73   28    58 0.031  -4.31
 5.02 Intr - 156252 156077  176  1  2   29   76   139 0.742   5.54
 5.01 Init - 157246 157039  208  1  1   62   20   196 0.515   9.23
 5.00 Prom - 171828 171789   40                              -3.05

 6.02 PlyA - 171945 171940    6                               1.05
 6.01 Sngl - 177744 177541  204  0  0   68   49   191 0.568   8.14
 6.00 Prom - 187261 187222   40                              -4.65

 7.02 PlyA - 188139 188134    6                               1.05
 7.01 Sngl - 191178 190885  294  0  0   50   48   189 0.800   6.55
 7.00 Prom - 194330 194291   40                              -6.65

 8.00 Prom + 194691 194730   40                              -4.15
 8.01 Init + 200214 200891  678  2  0   42   86   314 0.702  21.78
 8.02 Intr + 201952 202075  124  0  1   20   90    96 0.578   2.24
 8.03 Intr + 204307 204388   82  2  1   85   89    22 0.310  -0.22
 8.04 Intr + 209201 209482  282  2  0   56   89   105 0.311   3.01
 8.05 Intr + 213549 213711  163  0  1   64   97    29 0.396   0.46
 8.06 Term + 214574 214699  126  1  0   58   38   103 0.290  -0.40
 8.07 PlyA + 215467 215472    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_1|201_aa
MESGRVNVTVKVGGDSLVLSVAQDALEGALQCLHHHLLDVIIFGRFLQMAGQVHDRHIGG
EDMPVAVMAWTVVISHDAKVGMDDLDQGCEEVGGTGGIADDLEAVFELLMVHPHHEHGVI
NRQGRDDDHFDSLLSVCPSLLHGSGSEDASGLPNIMSTGITPFAFGGIFLREHGDRISTD
DKFPILSLANAMESYWNMQSM

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_1|606_bp
atggaaagtggaagagtaaatgtcactgttaaagttggaggagacagcctggtgctcagt
gtagcccaagatgcccttgaaggggccctccaatgcctgcatcaccaccttcttgatgta
atcatatttggcaggtttctccagatggcaggtcaggtccatgaccgacatattggtggt
gaggacatgccagtggcagtgatggcatggactgtggtcataagtcatgatgccaaagtt
ggcatggatgaccttgaccaggggtgcgaagaagttggtggtacaggaggcatcgctgat
gatcttgaggctgtttttgaacttctcatggttcacccccatcacgaacatggggtcatc
aacagacagggcagagatgatgaccattttgactccctactctcagtatgccccagcctt
ctccatgggagtgggagtgaagatgccagtgggctccccaacataatgagcactggcatc
accccatttgcttttggtgggatcttcctccgggaacacggtgataggatttccactgat
gacaagtttcccattctcagccttgccaatgccatggaatcatactggaatatgcagagc
atgtag

>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_2|290_aa
MPGFNSDTLTAVADLHVITHNNNANYAIRMPNTKSEPECKLWTLGDNDVSVRFIDCNKCT
TLVGDVNNGGGYACVGPPCSLRHNIEIKPIDNPTMASKCSSEHLVFNTQVFRAMMTVNHM
SSCFENSPQTMGADGLFGSSTPLFHLPQHRDLVPCVTATPAIAKRVQHTAWPMFSEGASP
KPWQFPHGVEPAVAQKSRIEVWEPPPRFQKMHGNAWMPRQKFATQVGPTWRISARAVQKG
NVESEPPHRVPTGAPPSGAVRRGLLSSKPQNGRFNDSLPCAPGKAIDAQC

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_2|873_bp
atgccaggattcaactcagacacactgactgctgttgcagacctccatgtgataactcat
aataataacgccaactatgctattagaatgccgaacaccaagagtgaacctgaatgtaaa
ctatggactctgggtgataatgatgtgtcagttaggtttattgactgcaacaaatgtacc
actctggtaggggatgtcaataatggtggaggctatgcatgtgtggggcctccctgttcc
ttgagacacaatattgaaattaagccaattgataaccccacaatggcctcaaagtgttca
agtgaacacttagtgttcaacactcaagtgttcagagcgatgatgactgtgaatcatatg
agctcttgctttgaaaatagtccacagacaatgggagcagatgggctttttggcagcagt
acccctcttttccatctgccacagcatagggacttggtgccctgtgtcacagccactcca
gccattgctaaaagggtccaacatacagcttggcccatgttttcagagggtgcaagcccc
aaaccttggcagtttccacatggtgttgagcctgcagttgcacagaagtcaagaattgag
gtttgggaacctcctcctagatttcagaagatgcatggaaacgcctggatgcccaggcaa
aagtttgctacacaggtggggcccacatggagaatctctgccagggcagtacagaaggga
aatgtggagtcagagcccccacacagagtgcctactggtgcaccacctagtggagctgtg
agaagagggttactgtcctccaaaccccaaaatgggagattcaatgacagcctgccctgt
gcacctggaaaagccatagacgctcaatgctag

>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_3|112_aa
MTPGVKAVVSYNQDNETVKQGRPRQVFPFRCRCQEASSQVQRPVVSAGPSRALVPLSSSG
AYSGVYPTVRFEIMFPSHLTPLENQSTGCQRSGMHAQRRGLGTPTPRGFLRR

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_3|339_bp
atgacaccaggtgtaaaggcagtggtgtcatataatcaagacaatgagacagtgaaacaa
gggcgcccacgacaggtgttcccttttcgctgtcgctgccaggaagcttccagccaggtt
cagcgcccagtggtgtcagccggcccatctcgagccttggttccgctgtcatcttctggt
gcttattctggtgtttatccaactgtccgttttgaaattatgttcccaagccatttaaca
cctctggagaaccaaagcactggctgtcagcggagcgggatgcacgcgcagcggagggga
ctgggcacgccaaccccacgagggttcctgcggagatga

>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_4|736_aa
MSLSENSVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFH
SRIVGQADGELNITLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEE
SCFQFLKFKFLDSTADQQECPRKKCFSSHCQKTDLKLSLLDQRDLETDEVEEFLENKNVQ
TPQCKLRRYQGNAKASPPLQDSASQTYESMCLEKDAALALPSLCPKYRKFQKAFGTDRVR
TGESSVKDIHASVQPNERSENECLGGVPECRDLQVMLKCDESKLAMEPEETKKDPASQCP
TEKSEVTPFPHNSSIDPHGLYSLSLLHTYDQYGDLNFAGMQNTTVLTEKPLSGTDVQEKT
FGESQDLPLKSDLGTREDSSVASSDRSSVEREVAEHLAKGFWSDICSTDTPCQMQLSPAV
AKDGSEQISQKRSECPWLGIRISESPEPGQRTFTTLSSVNCPFISTLSTEGCSSNLEIGN
DDYVSEPQQEPCPYACVISLGDDSETDTEGDSESCSAREQECEVKLPFNAQRIISLSRND
FQSLLKMHKLTPEQLDCIHDIRRRSKNRIAAQRCRKRKLDCIQNLESEIEKLQSEKESLL
KERDHILSTLGETKQNLTGLCQKVCKEAALSQEQIQILAKYSAADCPLSFLISEKDKSTP
DGELALPSIFSLSDRPPAVLPPCARGNSEPGYARGQESQQMSTATSEQAGPAEQCRQSGG
ISDFCQQMTDKCTTDE

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_4|2211_bp
atgtctctgagtgagaactcggtttttgcctatgaatcttctgtgcatagcaccaatgtt
ttactcagccttaatgaccagcggaagaaagatgtgctgtgcgatgtcaccatctttgtg
gagggacagcggttccgcgctcaccggtccgtgctggcggcatgcagcagttacttccac
tcaagaatcgtaggccaggctgatggagagctgaacattactcttccagaagaggtgaca
gttaaaggatttgaacctttaattcagtttgcctacactgctaaactgattttaagtaaa
gagaatgtggatgaagtgtgcaaatgtgtggagtttttaagtgtacataatattgaggaa
tcctgctttcagtttctgaaatttaagtttttggactccactgcagaccagcaagaatgc
ccaagaaaaaaatgcttttcatcacactgtcagaaaacagaccttaaactttcacttttg
gaccagagggatctagaaactgatgaagtggaggaatttctggaaaataaaaatgttcag
actcctcagtgtaaactccgcaggtatcaaggaaatgcaaaagcctcacctcctctacaa
gacagtgccagtcagacatatgagtccatgtgcttagagaaggatgctgctctggccttg
ccttctttatgccccaaatacagaaaattccaaaaagcatttggaactgacagagtccgt
actggggaatctagtgtcaaagacattcatgcttctgttcagccaaatgaaaggtctgaa
aatgaatgcctgggaggagtcccggagtgtagagatttgcaggtgatgttaaaatgtgac
gaaagtaaattagcaatggaacctgaagaaacgaagaaagatcctgcttctcagtgccca
actgaaaaatcagaagtgactcctttcccccacaattcttccatagaccctcatggactt
tattctttgtctcttttacacacatatgaccaatatggtgacttgaattttgctggtatg
caaaacacaacagtgttaacagaaaagcctttgtcaggtacagacgtccaagaaaaaaca
tttggtgaaagtcaggatttacctttgaaatccgacttgggcaccagggaagatagtagt
gttgcatctagtgataggagtagtgtggagcgagaagtggcagaacacctagcaaaaggc
ttctggagtgacatttgcagcacggacactccttgccaaatgcagttatcacctgctgtg
gccaaagatggctcagaacagatctcacagaaacggtctgagtgtccgtggttaggtatc
aggattagtgagagcccagaaccaggtcaaaggactttcacaacattaagttctgtcaac
tgcccttttataagtactctgagtactgaaggctgttcaagcaatttggaaattggaaac
gatgattatgtttcagaaccccagcaagaaccttgcccatatgcttgtgtcattagcttg
ggagacgactctgagacggacaccgaaggagacagtgaatcctgttcagccagagaacaa
gaatgtgaggtaaaactgccattcaatgcacaacggataatttcactgtctcgaaatgat
tttcagtccttgttgaaaatgcacaagcttactccagaacagctggattgtatccatgat
attcgaagaagaagtaaaaacagaattgctgcacagcgctgtcgcaagagaaaacttgac
tgtatacagaatcttgaatcagaaattgagaagctgcaaagtgaaaaggagagcttgttg
aaggaaagagatcacattttgtcaactctgggtgagacaaagcagaacctaactggactt
tgccagaaagtttgtaaagaagcagctctgagtcaagaacaaatacagatactcgccaag
tactcagctgcagattgcccactttcatttttaatttctgaaaaagataaaagtactcct
gatggtgaactggcgttaccatcaattttcagtttatctgaccggcctccagcagtgctg
cctccctgtgccagaggaaacagtgagcctggctacgcgcgagggcaggagtcccagcag
atgtccacagccacctctgagcaagctgggcctgcggaacagtgtcgtcagagtggtggg
atctcagatttctgtcagcagatgactgataaatgtactactgatgagtaa

>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_5|451_aa
MKEIHQRSDQSIRDAWGASGKEGCAENRMERIKEGIDSDYFNKRPAIPTDNMSITPMARS
KRHGDRGLGGDSDAAVLWARSPFKATGLCTIEQASLDAPFPGSVLRHVRGHFKTSVPETF
NLSLQSGQKSYVEILTSNAMVFGGGALIGPPSDFAKGTGPSLMSTAASLICLYHTQNAVY
QYLPDGQLRFVSPKYLRQVSINLESLSAKAKDVPMTASGSLGYMMTCTQVVRAQLGFIHF
SLILYIDETSINMHKRYIGLVQKGGTTRSKGFQGRASPLPVTPAGKYKERAEEVRGGHQT
TGTSSQGVWGLGEWEKRITLTPLDPVGVAKAGVIIYMNMGNELPICCPLLEEGINPEVWA
LEGTNSSSSLKPSHRMKLFFMHHRESKDGSWSPYSDSWGNPTTSGIPKSCGSHLAITRLR
TLIFNLLVKSVSSRIEAIKLQMVLRMEPQMS

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_5|1356_bp
atgaaagagatacatcaacgcagtgatcagagcatcagggatgcttggggggcatcagga
aaggaaggctgtgcagagaacaggatggagaggataaaggagggcattgattctgactac
ttcaacaagaggcctgccatccccactgataatatgagcattacccccatggcccgttca
aaacgtcatggcgatagaggtttagggggggacagtgatgctgctgtactgtgggccagg
tcacccttcaaggccacaggcctttgtacaatcgaacaggcttctcttgacgcaccattt
cctggcagtgtgctcaggcatgttcgtggccatttcaaaacttcagttccagagactttc
aacttaagtcttcaaagtggacagaaatcatatgttgaaattctaacctccaatgcaatg
gtatttggaggaggagccttgataggtccacctagtgacttcgcaaaaggtactggccct
tctctcatgagcacagctgccagccttatatgtttatatcacactcagaatgccgtctat
caatatctgcctgatggacagctacgttttgtgagcccaaagtatttgagacaggtctca
attaatttagaaagtttatctgccaaggctaaggacgtgcctatgacagcgtcaggaagt
cttgggtacatgatgacatgtacccaagtggtcagggcacagcttggttttatacatttt
agcttgattttatacattgatgagacctcaatcaatatgcataagaggtacattggtttg
gtccagaaaggtggaacaactcgaagtaagggattccagggaagagcatccccacttcca
gtcactccagcagggaagtataaggaaagggcagaagaagtgaggggtggacatcagacc
acagggactagctctcagggcgtgtggggactaggtgagtgggagaagcggatcacgctg
actccactagatccagtaggagtagccaaagctggagttattatctacatgaatatgggg
aacgagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggca
ttggaaggaacaaactcaagctccagccttaagccttcccacaggatgaaacttttcttt
atgcatcacagagagagcaaggatggctcttggagtccttactcagactcatggggcaac
cccacaaccagtggcatacctaagtcctgtggcagccatcttgctattactcgccttcgg
acccttatttttaacctccttgtcaaatctgtttcctctagaatcgaggccatcaagcta
cagatggtcttacgaatggaaccccaaatgagctaa

>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_6|67_aa
MQGLILGTPKSRDHEAEKESAATKEERQYSLVSQKASEGLIEKEGNDPVAICGKVSPGGL
RTAHWST

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_6|204_bp
atgcaaggactaatccttgggactccaaaatcaagagaccatgaagctgagaaggaatca
gcagcaactaaggaggaaaggcagtacagcctggtatcccagaaggcaagtgaagggctc
atcgagaaagaagggaatgaccctgtggccatctgtggcaaagtcagtcctgggggactg
agaactgctcattggagtacctga

>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_7|97_aa
MQHTRRYHRRLGKGQLGIASLDTLCRAHVEHTQTICTPQMSQRLEAQHTYYHQPRETHKY
HERSKNAFPPFMLTPASQFWRSQQQELGREAKEKGIA

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_7|294_bp
atgcagcacactagacggtaccaccggaggcttggaaaaggccaactgggtattgcatct
cttgacaccctgtgcagagcccacgtggagcacacacagaccatctgcaccccacaaatg
agccagcgtttggaggcccagcacacatattatcaccagccaagagaaacccataaatat
catgaacggagtaaaaatgcctttccccctttcatgctaacccctgcttcccagttctgg
aggagccagcagcaggagttgggaagagaagcaaaggagaaaggaattgcataa

>gi568815577f:29221281_29442830|GENSCAN_predicted_peptide_8|484_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSLLLFNIVLEVLARAIRKEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKRVTEESASALQEAT
AHCLHFLSLPTGESFRKEEHKHWDARGDFLKTQNKQCNYPIAGSKTWVKRRENDSFGNWI
YSVFSNCLVIDFKSEKKESLNNSFCKCVKAECEEKKLFSGTRSWFTFKKKISCLWQNGIA
ALSWMVICTSKFITNLAGEMLKTKAFISHLDPWGCQFYLLVLLPVEGVQVLGVLNINWTK
RTKKERMKQLKQRFIEIRNILHKFVLDLICKPTVEQKNMYQLPMPGEDSNYLEDRQGHHN
ASHL

>gi568815577f:29221281_29442830|GENSCAN_predicted_CDS_8|1455_bp
atgattatctcaatagatgcagaaaaagcctttgacaaaattcaacaacccttcatgcta
aaaactctcaataaattaggtattgatgggacgtatttcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcactgctcctattcaacatagtgttggaagtt
ctggccagggcaatcaggaaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagacgacatgattgtttatctagaaaaccccatcgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaagagggtgactgaggagtctgcctctgcccttcaagaagccaca
gctcattgtctgcacttcctttcattgccaactggggagagcttcagaaaggaggaacat
aagcattgggatgcacgaggagactttctaaagacacagaataaacaatgcaattatcca
atagcaggttctaaaacatgggtaaaaagaagagagaatgacagttttggaaactggata
tactctgtattcagcaattgccttgtaatagacttcaagagtgagaaaaaagaatccctt
aataatagtttctgcaaatgtgtgaaagctgagtgtgaggagaaaaagttgttttcagga
actaggagctggttcacctttaaaaagaaaatcagctgcctctggcaaaatggaattgca
gcattgtcctggatggtaatttgcactagtaaatttatcaccaacctggcaggggagatg
ctgaagacaaaagcttttatctctcaccttgatccttggggatgccaattttatttgctg
gttctgctaccggtggagggtgtccaggttctcggtgtcttgaacataaattggacaaaa
cgtacaaagaaagaaagaatgaagcaactaaagcagagatttattgaaatcagaaacata
ctccacaagtttgtacttgacctcatctgtaagcctactgttgagcagaaaaacatgtac
cagttaccaatgccaggtgaagattccaactatctggaggatagacaaggtcatcataat
gccagccacctgtaa