GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:30:17

Sequence gi568815583f:51946461_52164997 : 218537 bp : 44.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -    929    832   98  0  2   79   94    61 0.907   5.53
 1.10 Intr -   3534   3348  187  0  1   68  105   270 0.973  25.96
 1.09 Intr -   5519   5384  136  1  1   90   95    -3 0.609   1.17
 1.08 Intr -   6803   6669  135  1  0   81   93    43 0.919   3.78
 1.07 Intr -   8115   8021   95  0  2   68  105    54 0.980   3.86
 1.06 Intr -  12366  12282   85  2  1   17   76   114 0.639   2.92
 1.05 Intr -  13584  13439  146  0  2   72  110    89 0.978   8.58
 1.04 Intr -  14273  14179   95  0  2   52   81    76 0.969   2.98
 1.03 Intr -  16033  15929  105  2  0   62   63   107 0.970   5.79
 1.02 Intr -  20044  19289  756  2  0   51   90   996 0.984  87.54
 1.01 Init -  25285  24937  349  1  1   92   57   255 0.701  20.15
 1.00 Prom -  45428  45389   40                              -0.76

 2.03 PlyA -  45498  45493    6                               1.05
 2.02 Term -  72558  72349  210  0  0   39   44   103 0.610  -1.71
 2.01 Init -  73033  72935   99  1  0   83   38   182 0.923  10.96
 2.00 Prom -  98256  98217   40                               0.04

 3.00 Prom +  99066  99105   40                              -5.46
 3.01 Init + 100001 100555  555  1  0   68   95   316 0.957  25.27
 3.02 Intr + 103533 103677  145  2  1   88   92    57 0.930   5.96
 3.03 Intr + 112173 112337  165  1  0   87   67    80 0.975   5.73
 3.04 Intr + 114839 115040  202  0  1  101   94   112 0.997  11.44
 3.05 Term + 117442 118540 1099  1  1   64   41   508 0.999  35.26
 3.06 PlyA + 118745 118750    6                               1.05

 4.00 Prom + 133551 133590   40                              -2.06
 4.01 Init + 141304 141311    8  0  2  103   91     0 0.860   2.30
 4.02 Intr + 147797 148028  232  2  1   99   74    88 0.903   6.28
 4.03 Term + 148784 148951  168  1  0   37   42   202 0.999   8.38
 4.04 PlyA + 149039 149044    6                               1.05

 5.03 PlyA - 149980 149975    6                               1.05
 5.02 Term - 156263 156174   90  2  0   92   39    57 0.045  -1.08
 5.01 Init - 166266 165778  489  0  0   85   80   833 0.610  77.40
 5.00 Prom - 170033 169994   40                              -4.36

 6.13 PlyA - 171931 171926    6                               1.05
 6.12 Term - 173446 173366   81  1  0   93   48    -1 0.191  -5.91
 6.11 Intr - 173910 173842   69  0  0   63   86    75 0.399   4.18
 6.10 Intr - 178179 178013  167  1  2   61   52   107 0.870   4.08
 6.09 Intr - 179584 179488   97  1  1   68   83    93 0.984   6.38
 6.08 Intr - 181784 181736   49  1  1   63   92    55 0.545   2.08
 6.07 Intr - 187009 186918   92  1  2   88   77   183 0.438  15.99
 6.06 Intr - 188645 188532  114  2  0  114   93   -16 0.797   2.14
 6.05 Intr - 189296 189153  144  2  0   86   55   204 0.974  17.38
 6.04 Intr - 194812 194680  133  0  1   86   99   181 0.983  19.65
 6.03 Intr - 201075 200999   77  0  2   65  106     8 0.047  -1.39
 6.02 Intr - 203465 203424   42  2  0  141  100    42 0.970   9.14
 6.01 Init - 207719 207480  240  2  0   58   91   211 0.795  16.38
 6.00 Prom - 211104 211065   40                              -0.66

 7.00 Prom + 211851 211890   40                              -5.46
 7.01 Init + 211900 211909   10  0  1   99   79     9 0.893   0.67
 7.02 Intr + 212833 212963  131  2  2   58   77   108 0.922   7.11
 7.03 Term + 213026 213160  135  1  0   76   47    72 0.689  -0.08
 7.04 PlyA + 214162 214167    6                               1.05

 8.02 PlyA - 215862 215857    6                               1.05
 8.01 Term - 217526 217053  474  2  0   97   36   121 0.209   2.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 198440 198370   71  2  2   98   45   101 0.949   7.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_1|729_aa
MADMEDLFGSDADSEAERKGGFAGLRRMGAWQAFRCGSRTTVEAPAPRARGGVSSTPASA
PPALPEVPSSSGGQDGESDSLRLEALGVGGADGSWELVERKGRGAWVEVQASLRSADSDS
GSDSDSDQENAASGSNASGSESDQDERGDSGQPSNKELFGDDSEDEGASHHSGSDNHSER
SDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEGHRSDGGSHHSEAEGSEKAHSDDE
KWGREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDERQQ
LSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDD
EEEQDHKSESARGSDSEDEVLRMKRKNAIASDSEADSDTEVPKDNSGTMDLFGGADDISS
GSDGEDKPPTPGQPVDENGLPQDQQEEEPIPETRIEVEIPKVNTDLGNDLYFVKLPNFLS
VEPRPFDPQYYEDEFEDEEMLDEEGRTRLKLKVENTIRWRIRRDEEGNEIKESNARIVKW
SDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQGTGLQGQAVFKTKLTFRPHSTDSATHRK
MTLSLADRCSKTQKIRILPMAGRDPECQRTEMIKKEEERLRASIRRESQQRRMREKQHQR
GLSASYLEPDRYDEEEEGEESISLAAIKNRYKGGIREERARIYSSDSDEGSEEDKAQRLL
KAKKLTSDE

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_1|2187_bp
atggcggatatggaggatctcttcgggagcgacgccgacagcgaagctgagcgtaaaggt
gggttcgctggtcttcggaggatgggtgcgtggcaggccttccgctgtgggagccggaca
accgtggaggctccagcgccgcgggcaagaggtggcgtttcctccactcctgcctcagcg
ccccctgcactcccggaggtgccatcctcctccggcgggcaggatggagagtcagacagt
ctgcgcctcgaggctctgggtgtcggtggagcagacggttcctgggagcttgtggagcga
aaggggcgcggggcatgggtggaagtgcaggcgagcctgcgcagcgcggattctgattct
ggatctgactcagattctgatcaagagaatgctgcctctggcagtaatgcctctggaagt
gaaagtgatcaggatgaaagaggtgattcaggacaaccaagtaataaggaactgtttgga
gatgacagtgaggacgagggagcttcacatcatagtggtagtgataatcactctgaaaga
tcagacaatagatcagaagcttctgagcgttctgaccatgaggacaatgacccctcagat
gtagatcagcacagtggatcagaagcccctaatgatgatgaagacgaaggtcatagatcg
gatggagggagccatcattcagaagcagaaggttctgaaaaagcacattcagatgatgaa
aaatggggcagagaagataaaagtgaccagtcagatgatgaaaagatacaaaattctgat
gatgaggagagggcacaaggatctgatgaagataagctgcagaattctgacgatgatgag
aaaatgcagaacacagatgatgaggagaggcctcagctttccgatgatgagagacaacag
ctatctgaggaggaaaaggctaattctgatgatgaacggccggtagcttctgataatgat
gatgagaaacagaattctgatgatgaagaacaaccacagctgtctgatgaagagaaaatg
caaaattctgatgatgaaaggccacaggcctcagatgaagaacacaggcattcagatgat
gaagaggaacaggatcataaatcagaatctgcaagaggcagtgatagtgaagatgaagtt
ttacgaatgaaacgcaagaatgcgattgcatctgattcagaagcggatagtgacactgag
gtgccaaaagataatagtggaaccatggatttatttggaggtgcagatgatatctcttca
gggagtgatggagaagacaaaccacctactccaggacagcctgttgatgaaaatggattg
cctcaggatcaacaggaagaggagccaattcctgagaccagaatagaagtagaaataccc
aaagtaaacactgatttaggaaacgacttatattttgttaaactgcccaactttctcagt
gtagagcccagaccttttgatcctcagtattatgaagatgaatttgaagatgaagaaatg
ctggatgaagaaggtagaaccaggttaaaattaaaggtagaaaatactataagatggagg
atacgccgagatgaagaaggaaatgaaattaaagaaagcaatgctcggatagtcaagtgg
tcagatggaagcatgtccctgcatttaggcaatgaagtgtttgatgtgtacaaagcccca
ctgcagggcgaccacaatcatctttttataagacaaggtactggtctacagggacaagca
gtctttaaaacgaaactcaccttcagacctcactctacggacagtgccacacatagaaag
atgactctgtcacttgcagataggtgttcaaagacacagaagattagaatcttgccaatg
gctggtcgtgatcctgaatgccaacgcacagaaatgattaagaaagaagaagaacgtttg
agggcttccatacgtagggaatctcagcagcgccgaatgagagagaaacagcaccagcgg
gggctgagcgccagttacctggaacctgatcgatacgatgaggaggaggaaggcgaggag
tccatcagcttggctgccattaaaaaccgatataaagggggcattcgagaggaacgagcc
agaatctattcatcagacagtgatgagggatcagaagaagataaagctcaaagattactc
aaagcaaagaaacttaccagtgatgag

>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_2|102_aa
MEEGAGSAVAAAAAAAGPAAAPSRAAPPAHPAHGGRQLGPFALLPALALREQSDQTQCQR
LLSTYYVQGTGQSERKRPQSPGRVDLKMDWLEGDSPSTRQTR

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_2|309_bp
atggaggagggagccggctccgccgtcgccgccgccgccgccgccgccgggcccgccgcg
gcgccctcccgagccgccccgccggcgcaccccgcacacggaggaagacagctggggccg
tttgctctactacctgccctggcattaagggaacaaagtgaccaaacccagtgccagcgt
ttactaagcacctactacgtgcaaggcactgggcaatccgagaggaagaggcctcagtct
ccaggaagggtggaccttaagatggattggctggaaggcgacagcccgagcacaagacag
acgcgttag

>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_3|721_aa
MAEKFESLMNIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK
HALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE
QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP
HYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ
MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFS
PMDRLTAEEALSHPYMSIYSFPMDEPISSHPFHIEDEVDDILLMDETHSHIYNWERYHDC
QFSEHDWPVHNNFDIDEVQLDPRALSDVTDEEEVQVDPRKYLDGDREKYLEDPAFDTNYS
TEPCWQYSDHHENKYCDLECSHTCNYKTRSSSYLDNLVWRESEVNHYYEPKLIIDLSNWK
EQSKEKSDKKGKSKCERNGLVKAQIALEEASQQLAGKEREKNQGFDFDSFIAGTIQLSSQ
HEPTDVVDKLNDLNSSVSQLELKSLISKSVSQEKQEKGMANLAQLEALYQSSWDSQFVSG
GEDCFFINQFCEVRKDEQVEKENTYTSYLDKFFSRKEDTEMLETEPVEDGKLGERGHEEG
FLNNSGEFLFNKQLESIGIPQFHSPVGSPLKSIQATLTPSAMKSSPQIPHQTYSSILKHL
N

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_3|2166_bp
atggcagagaaatttgaaagtctcatgaacattcatggttttgatctgggttctaggtat
atggacttaaaaccattgggttgtggaggcaatggcttggttttttctgctgtagacaat
gactgtgacaaaagagtagccatcaagaaaattgtccttactgatccccagagtgtcaaa
catgctctacgtgaaatcaaaattattagaagacttgaccatgataacattgtgaaagtg
tttgagattcttggtcccagtggaagccaattaacagacgatgtgggctctcttacggaa
ctgaacagtgtttacattgttcaggagtacatggagacagacttggctaatgtgctggag
cagggccctttactggaagagcatgccaggcttttcatgtatcagctgctacgggggctc
aagtatattcactctgcaaatgtactgcacagagatctcaaaccagctaatcttttcatt
aatacggaagacttggtgctgaagataggtgactttggtcttgcacggatcatggatcct
cattattcccataagggtcatctttctgaaggattggttactaaatggtacagatctcca
cgtcttttactttctcctaataattatactaaagccattgacatgtgggctgcaggctgc
atctttgctgaaatgctgactggtaaaaccctttttgcaggtgcacatgaacttgaacag
atgcagctgattttagaatctattcctgttgtacatgaggaagatcgtcaggagcttctc
agcgtaattccagtttacattagaaatgacatgactgagccacacaaacctttaactcag
ctgcttccaggaattagtcgagaagcactggatttcctggaacaaattttgacatttagc
cccatggatcggttaacagcagaagaagcactctcccatccttacatgagcatatattct
tttccaatggatgagccaatttcaagccatccttttcatattgaagatgaagttgatgat
attttgcttatggatgaaactcacagtcacatttataactgggaaaggtatcatgattgt
cagttttcagagcatgattggcctgtacataacaactttgatattgatgaagttcagctt
gatccaagagctctgtccgatgtcactgatgaagaagaagtacaagttgatccccgaaaa
tatttggatggagatcgggaaaagtatctggaggatcctgcttttgataccaattactct
actgagccttgttggcaatactcagatcatcatgaaaacaaatattgtgatctggagtgt
agccatacttgtaactacaaaacgaggtcatcatcatatttagataacttagtttggaga
gagagtgaagttaaccattactatgaacccaagcttattatagatctttccaattggaaa
gaacaaagcaaagaaaaatctgataagaaaggcaaatcaaaatgtgaaaggaatggattg
gttaaagcccagatagcgctagaggaagcatcacagcaactggctggaaaagaaagggaa
aagaatcagggatttgattttgattcctttattgcaggaactattcagcttagttcccag
catgagcctactgatgttgttgataaattaaatgacttgaatagctcagtgtcccaacta
gaattgaaaagtttgatatcaaagtcagtaagccaagaaaaacaggaaaaaggaatggca
aatctggctcaattagaagccttgtaccagtcttcttgggacagccagtttgtgagtggt
ggggaggactgttttttcataaatcagttttgtgaggtaaggaaggatgaacaagttgag
aaggaaaacacttacactagttacttggacaagttctttagcaggaaagaagatactgaa
atgctagaaactgagccagtagaggatgggaagcttggggagagaggacatgaggaagga
tttctgaacaacagtggggagttcctctttaacaagcagctcgagtccataggcatccca
cagtttcacagtccagttgggtcaccacttaagtcaatacaggccacattaacaccttct
gctatgaaatcttcccctcaaattcctcatcaaacatacagcagcattctgaaacatctg
aactaa

>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_4|135_aa
MPSSSQLLALSSFPWKNIPAVGAWNTPASATPLWPDVYGCVNVQQEASGFHPGAKVYGAS
RLERTVWLTEVACLAAGSTYVGTFNNVATLHCLTAAIMGRMHAPGKGPSRLALPYRHSIP
TWLKLTSDDVKEQIY

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_4|408_bp
atgcccagctcatctcagctgcttgccctctcatcctttccttggaaaaacatcccagct
gttggggcctggaatactccagcatcagccacacccctctggcctgatgtgtatggctgt
gtcaatgtgcagcaggaggcaagtggcttccaccctggtgccaaggtctatggagccagc
agactggagaggacagtctggctgacagaggtggcctgccttgcagctggaagcacttac
gtgggaacatttaataacgtggccacacttcactgcctgactgccgccatcatgggtcgc
atgcatgctcctgggaagggcccgtcccggttggctttgccctatcgccacagcatcccc
acttggctgaagttgacatctgatgacgtgaaggagcagatttactaa

>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_5|192_aa
MVDQLRERTTMADPLRERTELLLADYLGYCAREPGTPEPAPSTPEAAVLRSAAARLRQIH
RSFFSAYLGYPGNRFELVALMADSVLSDSPGPTWGRVVTLVTFAGTLLERGPLVTARWKK
WGFQPRLKEQEGDVARDCQRLVALLSSRLMGQHRAWLQAQGGWGELIACMNADGSDARDG
AFDDAGRRGEEI

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_5|579_bp
atggttgaccagttgcgggagcgcaccaccatggccgacccgctgcgggagcgcaccgag
ctgttgctggccgactacctggggtactgcgcccgggaacccggcacccccgagccggcg
ccatccacgcccgaggccgccgtgctgcgctccgcggccgccaggttacggcagattcac
cggtcctttttctccgcctacctcggctaccccgggaaccgcttcgagctggtggcgctg
atggcggattccgtgctctccgacagccccggccccacctggggcagagtggtgacgctc
gtgaccttcgcagggacgctgctggagagagggccgctggtgaccgcccggtggaagaag
tggggcttccagccgcggctaaaggagcaggagggcgacgtcgcccgggactgccagcgc
ctggtggccttgctgagctcgcggctcatggggcagcaccgcgcctggctgcaggctcag
ggcggctggggagaattaatagcatgcatgaatgcagatggaagtgatgcaagagatgga
gcatttgatgatgcaggcaggagaggagaggagatctag

>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_6|434_aa
MGPPPSAEHMSVLCQPKAQNLVLSKGTDYGLVIPVHQVAERVEALGQFVMKTRRTLKGHG
NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACG
GLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE
SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGARNRGFESSELADRATETQRSTRLGVR
VPGSGLCYLTGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRL
YDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE
NRVSTLRVSPDGTAFCSGSWDHTLRWVLSGFADEILDLDYVTACGDSGVISGLKQHRVVR
AFVSRALIVARPAG

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_6|1305_bp
atggggccgcctccctctgcggaacatatgtctgtgctgtgtcagcccaaagcccagaac
ctggtccttagcaaggggactgactatggccttgtcattccagtgcaccaggtggcggag
cgggtggaggccctggggcagtttgtcatgaagaccagaaggaccctcaaaggccacggg
aacaaagtcctgtgcatggactggtgcaaagataagaggaggatcgtgagctcgtcacag
gatgggaaggtgatcgtgtgggattccttcaccacaaacaaggagcacgcggtcaccatg
ccctgcacgtgggtgatggcatgtgcttatgccccatcgggatgtgccattgcttgtggt
ggtttggataataagtgttctgtgtaccccttgacgtttgacaaaaatgaaaacatggct
gccaaaaagaagtctgttgctatgcacaccaactacctgtcggcctgcagcttcaccaac
tctgacatgcagatcctgacagcgagcggcgatggcacatgtgccctgtgggacgtggag
agcgggcagctgctgcagagcttccacggacatggggctgacgtcctctgcttggacctg
gccccctcagaaactggaaacaccttcgtgtctgggggtgcaagaaacagaggctttgaa
agctcagaattggcagacagggccacagagactcagagaagcactagactaggagtcagg
gtgcctgggtcagggctttgctacctgactggatgtgacaagaaagccatggtgtgggac
atgcgctccggccagtgcgtgcaggcctttgaaacacatgaatctgacatcaacagtgtc
cggtactaccccagtggagatgcctttgcttcagggtcagatgacgctacgtgtcgcctc
tatgacctgcgggcagatagggaggttgccatctattccaaagaaagcatcatatttgga
gcatccagcgtggacttctccctcagtggtcgcctgctgtttgctggatacaatgattac
actatcaacgtctgggatgttctcaaagggtcccgggtctccatcctgtttggacatgaa
aaccgcgttagcactctacgagtttcccccgatgggactgctttctgctctggatcatgg
gatcataccctcagatgggtgctgtcgggatttgctgatgagatacttgatttggactat
gtgacagcatgtggagactcaggggttataagtggcttaaaacagcacagggttgtaagg
gcctttgtgtcccgggctctcatagttgccaggccagctggctga

>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_7|91_aa
MAYTLEDSVDGDNTGGGKPGKRLLFFGSPLSSGHTICRTTLLCGPSKGEDACLCGLPAQL
GPLKLEMLNILDASPDQGIRIKVMAGTQEEV

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_7|276_bp
atggcgtacacgttggaggacagcgtcgatggagacaacactggaggagggaaaccaggg
aagagactcctcttctttggcagccccctctccagcggacacaccatctgccgcaccacg
cttctttgtggtccctccaagggagaggacgcttgcctctgtggcctccctgctcagttg
ggtcctctgaagcttgagatgctgaatattctggatgccagtccagaccaaggaatcaga
atcaaagtcatggctggaactcaagaggaagtgtag

>gi568815583f:51946461_52164997|GENSCAN_predicted_peptide_8|157_aa
GCCGLLGVHSRPLLPGSLLHLEVSPVKAAKQQRWHPAPSSGDSIPEGHQPDASWNAPGGG
ICRPLLGGLTQSRGMGSGTRLKKQSGCPLVEQIRCAGGNLPHPDHPDSPEHPGPTESSSL
AMICHSSCAALWGIPPSLDHPDSQELAGQDGLLELQR

>gi568815583f:51946461_52164997|GENSCAN_predicted_CDS_8|474_bp
ggctgctgcggtttgctgggggtccactccagacccttattgcctgggtccctcctgcac
ctggaggtatcaccagtgaaggctgcaaaacagcaaagatggcatccagctccttcctct
ggagactccatcccagaggggcaccaacctgatgccagctggaacgctcctggaggaggc
atttgtagacccctgttgggaggtctcacccagtcaagaggaatgggatcagggacccgc
ttaaagaagcagtctggctgccccctggtggagcagatacgctgtgctgggggaaacctc
cctcatccagaccacccagactctccagagcatccaggtcccactgaaagtagcagtctg
gccatgatctgccacagcagctgtgctgcgctgtggggaattcctcccagtttggaccac
cctgactcccaggagctggcaggccaggatggcctacttgagctgcagagatag