Restriction map for pF1KA0800
 (Linear) (Six-base) MAPSORT of: KIAA0800.seq  Check: 1043  from: 1  to: 4521



KIAA0800.orf

 With 182 enzymes: SgfI * 

                        July 18, 2007 13:35  ..

AarI CACCTGCnnnn'nnnn_

Cuts at:      0    3082    3298    3343    4521 
   Size:       3082     216      45    1178

  Fragments arranged by size: 

                3082    1178     216      45
 
Acc65I G'GTAC_C

Cuts at:      0      93    4521 
   Size:         93    4428
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     158    1105    1346    1612    1784    2029    3370    4521 
   Size:        158     947     241     266     172     245    1341    1151

  Fragments arranged by size: 

                1341    1151     947     266     245     241     172     158
            
 
AflIII A'CryG_T

Cuts at:      0      18    1934    4521 
   Size:         18    1916    2587

  Fragments arranged by size: 

                2587    1916      18
 
AgeI A'CCGG_T

Cuts at:      0    1231    4521 
   Size:       1231    3290
 
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:      0    1585    2224    4521 
   Size:       1585     639    2297

  Fragments arranged by size: 

                2297    1585     639
 
AlwNI CAG_nnn'CTG

Cuts at:      0    2348    2364    2671    4179    4296    4521 
   Size:       2348      16     307    1508     117     225

  Fragments arranged by size: 

                2348    1508     307     225     117      16
 
ApaI G_GGCC'C

Cuts at:      0     408    2268    4521 
   Size:        408    1860    2253

  Fragments arranged by size: 

                2253    1860     408
 
ApaLI G'TGCA_C

Cuts at:      0    1505    4521 
   Size:       1505    3016
 
ApoI r'AATT_y

Cuts at:      0     501    1156    1168    1488    1717    2027    2101    4521 
   Size:        501     655      12     320     229     310      74    2420

  Fragments arranged by size: 

                2420     655     501     320     310     229      74      12
            
 
AseI AT'TA_AT

Cuts at:      0    3824    4521 
   Size:       3824     697
 
AvaI C'yCGr_G

Cuts at:      0     407    4521 
   Size:        407    4114
 
BamHI G'GATC_C

Cuts at:      0     156    4521 
   Size:        156    4365
 
BanI G'GyrC_C

Cuts at:      0      93     937    1896    2758    2944    3218    3331    4521 
   Size:         93     844     959     862     186     274     113    1190

  Fragments arranged by size: 

                1190     959     862     844     274     186     113      93
            
 
BanII G_rGCy'C

Cuts at:      0      41     296     408    1427    2268    4521 
   Size:         41     255     112    1019     841    2253

  Fragments arranged by size: 

                2253    1019     841     255     112      41
 
BbsI GAAGACnn'nnnn_

Cuts at:      0     537    1438    1837    4427    4521 
   Size:        537     901     399    2590      94

  Fragments arranged by size: 

                2590     901     537     399      94
 
BbvCI CC'TCA_GC

Cuts at:      0    1997    2792    4521 
   Size:       1997     795    1729

  Fragments arranged by size: 

                1997    1729     795
 
BclI T'GATC_A

Cuts at:      0    1466    3818    4521 
   Size:       1466    2352     703

  Fragments arranged by size: 

                2352    1466     703
 
BfrBI ATG'CAT

Cuts at:      0     271    1296    4521 
   Size:        271    1025    3225

  Fragments arranged by size: 

                3225    1025     271
 
BglI GCCn_nnn'nGGC

Cuts at:      0     412    4521 
   Size:        412    4109
 
BglII A'GATC_T

Cuts at:      0     713    3651    4521 
   Size:        713    2938     870

  Fragments arranged by size: 

                2938     870     713
 
BlpI GC'TnA_GC

Cuts at:      0      35    4521 
   Size:         35    4486
 
Bme1580I G_kGCm'C

Cuts at:      0     408    1509    2268    4521 
   Size:        408    1101     759    2253

  Fragments arranged by size: 

                2253    1101     759     408
 
BmgBI CAC'GTC

Cuts at:      0    1935    4521 
   Size:       1935    2586
 
BmrI ACTGGGnnnn_n'

Cuts at:      0     581    1556    2511    2659    4521 
   Size:        581     975     955     148    1862

  Fragments arranged by size: 

                1862     975     955     581     148
 
BmtI G_CTAG'C

Cuts at:      0    1538    2821    4384    4521 
   Size:       1538    1283    1563     137

  Fragments arranged by size: 

                1563    1538    1283     137
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:      0      73     722    1897    3832    4318    4521 
   Size:         73     649    1175    1935     486     203

  Fragments arranged by size: 

                1935    1175     649     486     203      73
 
Bpu10I CC'TnA_GC

Cuts at:      0    1997    2792    3113    4521 
   Size:       1997     795     321    1408

  Fragments arranged by size: 

                1997    1408     795     321
 
BsaI GGTCTCn'nnnn_

Cuts at:      0     677    4521 
   Size:        677    3844
 
BsaBI GATnn'nnATC

Cuts at:      0     179     875    2053    2239    4521 
   Size:        179     696    1178     186    2282

  Fragments arranged by size: 

                2282    1178     696     186     179
 
BsaHI Gr'CG_yC

Cuts at:      0    3722    4521 
   Size:       3722     799
 
BsaWI w'CCGG_w

Cuts at:      0    1231    4521 
   Size:       1231    3290
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:      0     974    1004    4291    4321    4521 
   Size:        974      30    3287      30     200

  Fragments arranged by size: 

                3287     974     200      30      30
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:      0     646    2108    3089    3394    4216    4327    4390    4411 
   Size:        646    1462     981     305     822     111      63      21

Cuts at:   4411    4453    4521 
   Size:         42      68

  Fragments arranged by size: 

                1462     981     822     646     305     111      68      63
                  42      21
 
BseYI C'CCAG_C

Cuts at:      0     210    1737    2961    4521 
   Size:        210    1527    1224    1560

  Fragments arranged by size: 

                1560    1527    1224     210
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:      0    3321    3467    3728    4521 
   Size:       3321     146     261     793

  Fragments arranged by size: 

                3321     793     261     146
 
BsiHKAI G_wGCw'C

Cuts at:      0      41    1427    1509    2159    2213    4521 
   Size:         41    1386      82     650      54    2308

  Fragments arranged by size: 

                2308    1386     650      82      54      41
 
BsmI GAATG_Cn'

Cuts at:      0     261     273    1646    3298    3519    4521 
   Size:        261      12    1373    1652     221    1002

  Fragments arranged by size: 

                1652    1373    1002     261     221      12
 
Bsp1286I G_dGCh'C

Cuts at:      0      41     296     408    1427    1509    2159    2213    2268 
   Size:         41     255     112    1019      82     650      54      55

Cuts at:   2268    4521 
   Size:       2253

  Fragments arranged by size: 

                2253    1019     650     255     112      82      55      54
                  41
 
BspHI T'CATG_A

Cuts at:      0     251    1692    4521 
   Size:        251    1441    2829

  Fragments arranged by size: 

                2829    1441     251
 
BspMI ACCTGCnnnn'nnnn_

Cuts at:      0    1567    2633    3082    3298    3343    4521 
   Size:       1567    1066     449     216      45    1178

  Fragments arranged by size: 

                1567    1178    1066     449     216      45
 
BsrBI CCG'CTC

Cuts at:      0    3315    3740    3877    4521 
   Size:       3315     425     137     644

  Fragments arranged by size: 

                3315     644     425     137
 
BsrDI GCAATG_nn'

Cuts at:      0     476    2723    2907    3593    4521 
   Size:        476    2247     184     686     928

  Fragments arranged by size: 

                2247     928     686     476     184
 
BsrFI r'CCGG_y

Cuts at:      0    1231    4521 
   Size:       1231    3290
 
BsrGI T'GTAC_A

Cuts at:      0    4072    4521 
   Size:       4072     449
 
BstBI TT'CG_AA

Cuts at:      0     528    3846    4521 
   Size:        528    3318     675

  Fragments arranged by size: 

                3318     675     528
 
BstXI CCAn_nnnn'nTGG

Cuts at:      0    1605    3805    4521 
   Size:       1605    2200     716

  Fragments arranged by size: 

                2200    1605     716
 
BstYI r'GATC_y

Cuts at:      0     156     713    1951    2354    2525    3651    4521 
   Size:        156     557    1238     403     171    1126     870

  Fragments arranged by size: 

                1238    1126     870     557     403     171     156
 
Bsu36I CC'TnA_GG

Cuts at:      0     776    4521 
   Size:        776    3745
 
BtgI C'CryG_G

Cuts at:      0     592    1277    2797    2940    4521 
   Size:        592     685    1520     143    1581

  Fragments arranged by size: 

                1581    1520     685     592     143
 
BtsI GCAGTG_nn'

Cuts at:      0      64      84     305    2157    2403    2669    4521 
   Size:         64      20     221    1852     246     266    1852

  Fragments arranged by size: 

                1852    1852     266     246     221      64      20
 
CspCI CAAnnnnnGTGGnnnnnnnnnn_nn'

Cuts at:      0    1152    1187    4521 
   Size:       1152      35    3334

  Fragments arranged by size: 

                3334    1152      35
 
DraI TTT'AAA

Cuts at:      0     302    4521 
   Size:        302    4219
 
DrdI GACnn_nn'nnGTC

Cuts at:      0     185    4521 
   Size:        185    4336
 
EaeI y'GGCC_r

Cuts at:      0    1595    2165    4521 
   Size:       1595     570    2356

  Fragments arranged by size: 

                2356    1595     570
 
EarI CTCTTCn'nnn_

Cuts at:      0     134     238     609    3962    4193    4208    4521 
   Size:        134     104     371    3353     231      15     313

  Fragments arranged by size: 

                3353     371     313     231     134     104      15
 
EciI GGCGGAnnnnnnnnn_nn'

Cuts at:      0    3218    4318    4521 
   Size:       3218    1100     203

  Fragments arranged by size: 

                3218    1100     203
 
EcoICRI GAG'CTC

Cuts at:      0      39    1425    4521 
   Size:         39    1386    3096

  Fragments arranged by size: 

                3096    1386      39
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:      0      73     158     722    1105    1346    1612    1784    1897 
   Size:         73      85     564     383     241     266     172     113

Cuts at:   1897    2029    3370    3832    4318    4521 
   Size:        132    1341     462     486     203

  Fragments arranged by size: 

                1341     564     486     462     383     266     241     203
                 172     132     113      85      73
 
EcoNI CCTnn'n_nnAGG

Cuts at:      0    4393    4521 
   Size:       4393     128
 
EcoO109I rG'GnC_Cy

Cuts at:      0    2265    3440    3840    4521 
   Size:       2265    1175     400     681

  Fragments arranged by size: 

                2265    1175     681     400
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:      0    2566    3540    4521 
   Size:       2566     974     981

  Fragments arranged by size: 

                2566     981     974
 
FspI TGC'GCA

Cuts at:      0    1178    1573    4521 
   Size:       1178     395    2948

  Fragments arranged by size: 

                2948    1178     395
 
HaeII r_GCGC'y

Cuts at:      0    3139    4521 
   Size:       3139    1382
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:      0     974    1006    1936    1943    1968    1975    2875    2907 
   Size:        974      32     930       7      25       7     900      32

Cuts at:   2907    3724    3756    4408    4440    4521 
   Size:        817      32     652      32      81

  Fragments arranged by size: 

                 974     930     900     817     652      81      32      32
                  32      32      25       7       7
 
HincII GTy'rAC

Cuts at:      0    3635    4521 
   Size:       3635     886
 
HindIII A'AGCT_T

Cuts at:      0     695    4521 
   Size:        695    3826
 
KpnI G_GTAC'C

Cuts at:      0      97    4521 
   Size:         97    4424
 
MfeI C'AATT_G

Cuts at:      0     118    1824    2058    4521 
   Size:        118    1706     234    2463

  Fragments arranged by size: 

                2463    1706     234     118
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:      0    1919    2216    2915    4289    4521 
   Size:       1919     297     699    1374     232

  Fragments arranged by size: 

                1919    1374     699     297     232
 
MscI TGG'CCA

Cuts at:      0    1597    2167    4521 
   Size:       1597     570    2354

  Fragments arranged by size: 

                2354    1597     570
 
MslI CAynn'nnrTG

Cuts at:      0      77    1039    2206    2233    3605    3803    4045    4521 
   Size:         77     962    1167      27    1372     198     242     476

  Fragments arranged by size: 

                1372    1167     962     476     242     198      77      27
            
 
MspA1I CmG'CkG

Cuts at:      0     510    1762    2348    2364    2979    3348    4521 
   Size:        510    1252     586      16     615     369    1173

  Fragments arranged by size: 

                1252    1173     615     586     510     369      16
 
NcoI C'CATG_G

Cuts at:      0    1277    2940    4521 
   Size:       1277    1663    1581

  Fragments arranged by size: 

                1663    1581    1277
 
NdeI CA'TA_TG

Cuts at:      0     273    4521 
   Size:        273    4248
 
NheI G'CTAG_C

Cuts at:      0    1534    2817    4380    4521 
   Size:       1534    1283    1563     141

  Fragments arranged by size: 

                1563    1534    1283     141
 
NsiI A_TGCA'T

Cuts at:      0     273    1298    4521 
   Size:        273    1025    3223

  Fragments arranged by size: 

                3223    1025     273
 
NspI r_CATG'y

Cuts at:      0      22     885    1296    1682    3049    4521 
   Size:         22     863     411     386    1367    1472

  Fragments arranged by size: 

                1472    1367     863     411     386      22
 
PasI CC'CwG_GG

Cuts at:      0     926    2808    4521 
   Size:        926    1882    1713

  Fragments arranged by size: 

                1882    1713     926
 
PciI A'CATG_T

Cuts at:      0      18    4521 
   Size:         18    4503
 
PflMI CCAn_nnn'nTGG

Cuts at:      0    2174    3187    4296    4521 
   Size:       2174    1013    1109     225

  Fragments arranged by size: 

                2174    1109    1013     225
 
PfoI T'CCnGG_A

Cuts at:      0    3257    4521 
   Size:       3257    1264
 
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:      0    1990    2022    4521 
   Size:       1990      32    2499

  Fragments arranged by size: 

                2499    1990      32
 
PpuMI rG'GwC_Cy

Cuts at:      0    3440    3840    4521 
   Size:       3440     400     681

  Fragments arranged by size: 

                3440     681     400
 
PspOMI G'GGCC_C

Cuts at:      0     404    2264    4521 
   Size:        404    1860    2257

  Fragments arranged by size: 

                2257    1860     404
 
PstI C_TGCA'G

Cuts at:      0     312    2387    2498    4521 
   Size:        312    2075     111    2023

  Fragments arranged by size: 

                2075    2023     312     111
 
PvuII CAG'CTG

Cuts at:      0     510    1762    2348    2364    2979    3348    4521 
   Size:        510    1252     586      16     615     369    1173

  Fragments arranged by size: 

                1252    1173     615     586     510     369      16
 
SacI G_AGCT'C

Cuts at:      0      41    1427    4521 
   Size:         41    1386    3094

  Fragments arranged by size: 

                3094    1386      41
 
ScaI AGT'ACT

Cuts at:      0    1473    4521 
   Size:       1473    3048
 
SfcI C'TryA_G

Cuts at:      0       5     308     489     544     550     665    1955    1967 
   Size:          5     303     181      55       6     115    1290      12

Cuts at:   1967    2383    2494    2949    3695    4031    4521 
   Size:        416     111     455     746     336     490

  Fragments arranged by size: 

                1290     746     490     455     416     336     303     181
                 115     111      55      12       6       5
 
SfiI GGCCn_nnn'nGGCC

Cuts at:      0     412    4521 
   Size:        412    4109
 
SpeI A'CTAG_T

Cuts at:      0     745    4521 
   Size:        745    3776
 
SphI G_CATG'C

Cuts at:      0    1296    1682    4521 
   Size:       1296     386    2839

  Fragments arranged by size: 

                2839    1296     386
 
SspI AAT'ATT

Cuts at:      0     997    1529    4521 
   Size:        997     532    2992

  Fragments arranged by size: 

                2992     997     532
 
StyI C'CwwG_G

Cuts at:      0    1277    2940    4521 
   Size:       1277    1663    1581

  Fragments arranged by size: 

                1663    1581    1277
 
TaqII GACCGAnnnnnnnnn_nn'

Cuts at:      0     918    1673    2746    4521 
   Size:        918     755    1073    1775

  Fragments arranged by size: 

                1775    1073     918     755
 
TatI w'GTAC_w

Cuts at:      0    1188    1471    4072    4521 
   Size:       1188     283    2601     449

  Fragments arranged by size: 

                2601    1188     449     283
 
TstI CACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:      0    1626    1658    3675    3707    3737    3769    3800    3832 
   Size:       1626      32    2017      32      30      32      31      32

Cuts at:   3832    4521 
   Size:        689

  Fragments arranged by size: 

                2017    1626     689      32      32      32      32      31
                  30
 
Tth111I GACn'n_nGTC

Cuts at:      0    2404    4521 
   Size:       2404    2117
 
XbaI T'CTAG_A

Cuts at:      0    4392    4521 
   Size:       4392     129
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:      0     849    4521 
   Size:        849    3672
 
XmnI GAAnn'nnTTC

Cuts at:      0     394    4521 
   Size:        394    4127
 

 Enzymes that do cut:

     AarI   Acc65I     AcuI   AflIII     AgeI     AlfI    AlwNI     ApaI
    ApaLI     ApoI     AseI     AvaI    BamHI     BanI    BanII     BbsI
    BbvCI     BclI    BfrBI     BglI    BglII     BlpI Bme1580I    BmgBI
     BmrI     BmtI     BpmI   Bpu10I     BsaI    BsaBI    BsaHI    BsaWI
    BsaXI    BseRI    BseYI     BsgI  BsiHKAI     BsmI Bsp1286I    BspHI
    BspMI    BsrBI    BsrDI    BsrFI    BsrGI    BstBI    BstXI    BstYI
   Bsu36I     BtgI     BtsI    CspCI     DraI     DrdI     EaeI     EarI
     EciI  EcoICRI  Eco57MI    EcoNI EcoO109I     FalI     FspI    HaeII
    Hin4I   HincII  HindIII     KpnI     MfeI     MmeI     MscI     MslI
   MspA1I     NcoI     NdeI     NheI     NsiI     NspI     PasI     PciI
    PflMI     PfoI     PpiI    PpuMI   PspOMI     PstI    PvuII     SacI
     ScaI     SfcI     SfiI     SpeI     SphI     SspI     StyI    TaqII
     TatI     TstI  Tth111I     XbaI     XcmI     XmnI

 Enzymes that do not cut: 

    AatII     AccI     AclI     AfeI    AflII     AhdI     AleI     AloI
     AscI    AsiSI    AvrII     BaeI     BbeI     BcgI    BciVI     BplI
    BpuEI    BsaAI    BsiEI    BsiWI    BsmBI    BspEI   BssHII    BssSI
   BstAPI   BstEII  BstZ17I    BtgZI     ClaI   DraIII     EagI    EcoRI
    EcoRV     FseI    FspAI     HpaI     KasI     MluI     NaeI     NarI
   NgoMIV     NotI     NruI     PacI     PmeI     PmlI    PshAI     PsiI
    PspXI     PsrI     PvuI    RsrII    SacII     SalI    SanDI     SapI
     SbfI    SexAI     SfoI     SgfI    SgrAI     SmaI     SmlI    SnaBI
     SrfI     StuI     SwaI     XhoI     XmaI     ZraI
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