GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:43:19

Sequence gi568815586f:93278323_93499376 : 221054 bp : 41.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1513   1749  237  0  0   95   36   122 0.592   2.88
 1.02 PlyA +   2579   2584    6                               1.05

 2.00 Prom +   5084   5123   40                              -4.75
 2.01 Init +  17886  18035  150  2  0   86   48    73 0.118   3.23
 2.02 Intr +  35065  35276  212  0  2   92   30   116 0.647   2.99
 2.03 Intr +  36310  36489  180  1  0    8   55   210 0.599   7.76
 2.04 Intr +  83086  83239  154  1  1   64   90    35 0.012   0.45
 2.05 Intr +  87698  87739   42  1  0   43  107    58 0.244   0.72
 2.06 Intr +  92754  92909  156  2  0   62   67   104 0.522   4.99
 2.07 Intr +  99805 100099  295  0  1   17   75   225 0.029   9.76
 2.08 Intr + 100286 100371   86  0  2   68   96    29 0.033   0.32
 2.09 Intr + 116194 116397  204  0  0   55   78   166 0.394  10.77
 2.10 Intr + 120446 120533   88  1  1   38  111    65 0.517   2.42
 2.11 Term + 120855 121057  203  1  2   98   44    85 0.893   1.67
 2.12 PlyA + 121220 121225    6                              -0.45

 3.08 PlyA - 121383 121378    6                               1.05
 3.07 Term - 121463 121411   53  0  2   96   43    56 0.008  -1.49
 3.06 Intr - 132552 132412  141  1  0   82   70   142 0.758  11.20
 3.05 Intr - 132977 132731  247  2  1   98  115   242 0.999  24.01
 3.04 Intr - 163481 163379  103  1  1   91   20    76 0.009   0.36
 3.03 Intr - 164981 164923   59  2  2   86   96    25 0.010  -0.14
 3.02 Intr - 170925 170845   81  0  0  127   59    32 0.294   3.12
 3.01 Init - 175513 175508    6  1  0   72  131     9 0.702   4.03
 3.00 Prom - 177173 177134   40                              -7.15

 4.04 PlyA - 177601 177596    6                               1.05
 4.03 Term - 189649 189228  422  2  2    3   49   223 0.225   4.37
 4.02 Intr - 192451 192365   87  2  0   64   82    53 0.253   1.32
 4.01 Init - 198395 198278  118  2  1   35   69   157 0.932   8.91
 4.00 Prom - 207141 207102   40                              -4.35

 5.00 Prom + 215685 215724   40                              -2.85
 5.01 Sngl + 218729 219034  306  1  0   49   43   238 0.989  11.02
 5.02 PlyA + 219111 219116    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  69055  68886  170  2  2   99   44   148 0.986   8.56
S.002 Term + 100527 100596   70  0  1   78   47   129 0.874   4.23
S.003 Term + 151274 151414  141  1  0    1   47   234 0.870   7.55
S.004 Term + 163826 164098  273  1  0   37   51   231 0.838   8.79
S.005 Term + 179608 179739  132  0  0  131   49    70 0.800   4.51
S.006 Term - 205846 205646  201  1  0   61   38   138 0.835   2.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:93278323_93499376|GENSCAN_predicted_peptide_1|78_aa
ARVIAHVPSPNKASKPTTQTWVQRQTLPLTERSSVSLSGEWESSLTGAKTLALGMIKFKA
FLGHSHNQSLQAFTCTTI

>gi568815586f:93278323_93499376|GENSCAN_predicted_CDS_1|237_bp
gcaagagtgattgcccatgttccatcccccaacaaagcatcaaaaccaaccacacagacc
tgggttcaaaggcagactctaccacttactgagagatcatcagtgtccttatctggagaa
tgggaatcatccctaacaggtgcaaagactctagccttgggcatgatcaaattcaaagcc
ttcttgggacactctcataatcagtcactgcaggctttcacctgcacaaccatctag

>gi568815586f:93278323_93499376|GENSCAN_predicted_peptide_2|589_aa
MEPKFLATVRECCLRPTLSDWGGNMRVLTGDFPKESLTPSGLKDDSKWHTQSGLKKTSGL
KKLPTLVLAIGNTVYKCTLLQLVLENLGTDASPQGNIRVGDQVKSQSYLQDLPYILALFS
TCGRFQSLRSEPAPGDLYPESGRKANRRKPTAEAIALRMIRGNRPSLTFAHWKSQSQVSL
GHFRPFVLLFQTAQNAKIKSRILSFGGMLEVDFISGAQTPLRSRVKSFKFLKSSSAIIAF
DGDWILLSGSSLNPVCLRNLHSVSIPSPRVWGGTLSGMRVLGITIGKVEKDYSPTLEQRP
VPPASERPPAPGLTGLAAPPAPTSAPGRSCARLALAPTPRRGGGGRAPTAAAGAAAAAAG
ARLYDEVQAQPDADLRPRGLQEAGGVPVLPERAGGRDETKGARPAPVSPSGHSRRRLVPG
KVPGRNRVITLQRFENVVYIRSASQAGSIQLWFTLQVLLVSSSRYPDQWIVPGGGMEPEE
EPGGAAVREVYEEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQC
HKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR

>gi568815586f:93278323_93499376|GENSCAN_predicted_CDS_2|1770_bp
atggagccaaagttccttgccacagtgagagaatgctgccttcgccccaccctcagtgac
tggggaggaaacatgagggtcctcacaggggattttccaaaagagagtttaaccccaagt
ggtctgaaagatgattctaaatggcacacacaaagtggcctcaagaagacctctggcctc
aagaagctccccactcttgtactggcaattggcaatacagtgtacaaatgtacactgctt
caactggtcctagaaaacctgggaaccgatgcatccccacaaggaaatattagagttggg
gaccaggtgaaatcacagtcataccttcaggaccttccatatatacttgccttattcagc
acgtgtggcagattccagagcctgcggtctgaaccagcccctggtgacctttaccccgag
agcggaagaaaggcaaacaggcggaagcccacagccgaggccatcgcgctgcgcatgatc
cgtggcaaccgtccttccttgacctttgcccactggaaaagccaatcccaagtcagcctg
gggcacttccggccatttgttttactctttcaaacagctcaaaatgccaaaattaaatca
agaattttatcatttggaggcatgcttgaagtagattttatttctggtgcccaaacccct
ctcaggtccagagtaaaaagcttcaaattcctgaagagttcctctgccatcattgccttt
gatggtgactggattctgctatctggaagctctctgaacccagtgtgtttacggaatctt
catagtgttagcattccttcccccagggtatggggcggaaccctctctggaatgagggtc
ttaggaatcacaatcggaaaggtggagaaagattacagtcctaccttggagcagcgtccc
gtcccgcccgcgtcggagcggccgccggccccgggactgaccggcctcgccgcacctccc
gcaccgactagcgctcccgggcgctcctgcgcccgactcgccctcgcccccactccccgg
cggggtggcggcggccgggcccccacggcggcggccggagcagcagcagcagcagcagga
gcccgcctctatgatgaagttcaagcccaaccagacgcggacctacgaccgcgagggctt
caagaagcgggcggcgtgcctgtgcttccggagcgagcaggaggacgagatgagacaaag
ggggctcgcccagccccagtttctccatctgggcactcgagaaggcgcctggtccccggg
aaggtcccgggccgcaatagagttataaccttgcagaggtttgagaatgttgtttatata
cgaagtgcttctcaggctggaagtatacagttatggttcaccttacaggtgctgctggtg
agtagcagccggtacccagaccagtggattgtcccaggaggaggaatggaacccgaggag
gaacctggcggtgctgccgtgagggaagtttatgaggagcagaaccaagaccgaaagcac
agaacatatgtttatgttctaacagtcactgaaatattagaagattgggaagattctgtt
aatattggaaggaagagagagtggttcaaagtagaagatgctatcaaagttctccagtgt
cataaacctgtacatgcagagtatctggaaaagctaaagctgggttgttccccagccaat
ggaaattctacagtcccttcccttccggataataatgccttgtttgtaaccgctgcacag
acctctgggttgccatctagtgtaagatag

>gi568815586f:93278323_93499376|GENSCAN_predicted_peptide_3|229_aa
MPIASDIIEKHGRNQSDLRQTGDGEGGRKLNAISQAISYAWHTLPYKVSWAGSAASRLLR
PAARSGRPEAARRGVGRGGEGSRETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPF
EGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLS
IQALLSAPNPDDPLANDVAEQWKTNEAQAIETDGFAEYANAVNEKTILG

>gi568815586f:93278323_93499376|GENSCAN_predicted_CDS_3|690_bp
atgccgatagcaagtgacataatagagaaacatgggagaaatcaatcagacttgagacag
acaggtgatggtgaaggaggaagaaagctcaatgccatttcacaggccatttcctatgct
tggcatactcttccctacaaggtcagctgggcaggcagcgcggcctctcgcctccttcgg
cccgcggcccgctctgggaggcccgaggcggcgcggagaggggttggccgcggcggcgag
ggaagtcgggaaacccagcgtttgctggcagaaccagttcctggcatcaaagccgaacca
gatgagagcaacgcccgttattttcatgtggtcattgctggccctcaggattcccccttt
gagggagggacttttaaacttgaactattccttccagaagaatacccaatggcagcccct
aaagtacgtttcatgaccaaaatttatcatcctaatgtagacaagttgggaagaatatgt
ttagatattttgaaagataagtggtccccagcactgcagatccgcacagttctgctatcg
atccaggccttgttaagtgctcccaatccagatgatccattagcaaatgatgtagcggag
cagtggaagaccaacgaagcccaagccatagaaacagatggatttgctgaatatgctaat
gctgtgaatgagaaaacaattttggggtag

>gi568815586f:93278323_93499376|GENSCAN_predicted_peptide_4|208_aa
MVNIGKDGPHRKATKQIVQVQESLFSGDDVQGALKNEKITTQMQLEAIILSELMQKQPNT
TCSNLQVGAQRKARPAGSQIIHPRKIISEIKSLSPEFNPKTKATEPLRVRGLRNRLPRAP
ELFDLKESLEPQAASPPHGRPPGNKGGAIRNAQPHAGSSAGRTKAGDAGNLALPGTTGGR
PLQLPTNTVGLPSFEEVLDRRSRGKRLP

>gi568815586f:93278323_93499376|GENSCAN_predicted_CDS_4|627_bp
atggtaaacattggcaaagatgggccacacagaaaggctaccaaacaaattgtgcaggtt
caagaaagccttttcagtggagatgatgtccaaggtgctctgaagaatgagaaaataaca
acacagatgcagctggaggccattatcctaagtgaattaatgcaaaaacagccaaatact
acatgttctaacttacaagtaggagcccagagaaaagcacgccctgctgggagtcagatt
attcaccccaggaagatcatttcagagatcaagtccctcagcccggaattcaaccccaaa
acaaaagctacagagcctctgagggtcagaggtttgaggaacaggctaccaagagcacca
gaactcttcgacctaaaggagtccctagagccacaagctgcatcacctccccacgggcgt
ccgccagggaacaaagggggcgctataagaaacgcgcagccacatgccggctcttctgca
ggaaggacaaaggctggggatgcaggcaacctcgccctgccgggaacgacaggcgggaga
cctctacaactgccgaccaacactgtgggactgcccagtttcgaggaagtcctcgacagg
aggagtagagggaagcggttaccttga

>gi568815586f:93278323_93499376|GENSCAN_predicted_peptide_5|101_aa
MNSETESVIKKQQPKSSGPDRSTAEFYQMCKEPVPILLILFPQQQQQKIEEEGLLPNSFY
KNGIILIPKSDRDITEKQNYGPVSLINMDAKILNKIRANQI

>gi568815586f:93278323_93499376|GENSCAN_predicted_CDS_5|306_bp
atgaattctgaaactgaatcagtaataaaaaaacaacaaccaaaaagctctggaccagac
agatccacagctgaattctaccagatgtgcaaagagccagtaccaatcctactgatacta
ttcccccaacaacaacaacaaaaaatcgaggaggaaggactcctccccaactcattctac
aaaaacggcatcatcctgatacccaaatctgacagagacataacagaaaaacaaaactat
gggccagtatccctgataaacatggatgctaaaatcctcaacaaaatacgagcaaaccaa
atctag