Result of FASTA (ccds) for pF1KA0335
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0335, 1483 aa
  1>>>pF1KA0335 1483 - 1483 aa - 1483 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.9701+/-0.00168; mu= -3.5473+/- 0.096
 mean_var=472.5171+/-117.143, 0's: 0 Z-trim(106.1): 437  B-trim: 0 in 0/50
 Lambda= 0.059002
 statistics sampled from 8338 (8806) to 8338 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.271), width:  16
 Scan time:  4.170

The best scores are:                                      opt bits E(32554)
CCDS73170.1 ZNF518A gene_id:9849|Hs108|chr10       (1483) 9860 856.6       0


>>CCDS73170.1 ZNF518A gene_id:9849|Hs108|chr10            (1483 aa)
 initn: 9860 init1: 9860 opt: 9860  Z-score: 4560.9  bits: 856.6 E(32554):    0
Smith-Waterman score: 9860; 100.0% identity (100.0% similar) in 1483 aa overlap (1-1483:1-1483)

               10        20        30        40        50        60
pF1KA0 MPSEQKQLFCDEKQTTLKKDYDVKNEIVDRSAPKPKISGSIHYALKNVKIDLPKINIPNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MPSEQKQLFCDEKQTTLKKDYDVKNEIVDRSAPKPKISGSIHYALKNVKIDLPKINIPNE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 VLLKHEVDKYRKLFQSKQQTARKSISIKTVSCVEECTLLHKSERAEEEGVKMSAKILNFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VLLKHEVDKYRKLFQSKQQTARKSISIKTVSCVEECTLLHKSERAEEEGVKMSAKILNFS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 CLKCRDNTRYSPNDLQKHFQMWHHGELPSYPCEMCNFSANDFQVFKQHRRTHRSTLVKCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 CLKCRDNTRYSPNDLQKHFQMWHHGELPSYPCEMCNFSANDFQVFKQHRRTHRSTLVKCD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 ICNNESVYTLLNLTKHFTSTHCVNGNFQCEKCKFSTQDVGTFVQHIHRHNEIHYKCGKCH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ICNNESVYTLLNLTKHFTSTHCVNGNFQCEKCKFSTQDVGTFVQHIHRHNEIHYKCGKCH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 HVCFTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLVRHVITLHKEHLYAKEKLEKDKY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HVCFTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLVRHVITLHKEHLYAKEKLEKDKY
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 EKRMAKTSAGLKLILKRYKIGASRKTFWKRKKINSGSDRSIEKNTQVLKKMNKTQTKSED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EKRMAKTSAGLKLILKRYKIGASRKTFWKRKKINSGSDRSIEKNTQVLKKMNKTQTKSED
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 QSHVVQEHLSEEKDERLHCENNDKAPESESEKPTPLSTGQGNRAEEGPNASSGFMKTAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QSHVVQEHLSEEKDERLHCENNDKAPESESEKPTPLSTGQGNRAEEGPNASSGFMKTAVL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 GPTLKNVMMKNNKLAVSPNYNATFMGFKMMDGKQHIVLKLVPIKQNVCSPGSQSGAAKDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GPTLKNVMMKNNKLAVSPNYNATFMGFKMMDGKQHIVLKLVPIKQNVCSPGSQSGAAKDG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 TANLQPQTLDTNGFLTGVTTELNDTVYMKAATPFSCSSSILSGKASSEKEMTLISQRNNM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TANLQPQTLDTNGFLTGVTTELNDTVYMKAATPFSCSSSILSGKASSEKEMTLISQRNNM
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 LQTMDYEKSVSSLSATSELVTASVNLTTKFETRDNVDFWGNHLTQSHPEVLGTTIKSPDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LQTMDYEKSVSSLSATSELVTASVNLTTKFETRDNVDFWGNHLTQSHPEVLGTTIKSPDK
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 VNCVAKPNAYNSGDMHNYCINYGNCELPVESSNQGSLPFHNYSKVNNSNKRRRFSGTAVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VNCVAKPNAYNSGDMHNYCINYGNCELPVESSNQGSLPFHNYSKVNNSNKRRRFSGTAVY
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 ENPQRESSSSKTVVQQPISESFLSLVRQESSKPDSLLASISLLNDKDGTLKAKSEIEEQY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ENPQRESSSSKTVVQQPISESFLSLVRQESSKPDSLLASISLLNDKDGTLKAKSEIEEQY
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 VLEKGQNIDGQNLYSNENQNLECATEKSKWEDFSNVDSPMMPRITSVFSLQSQQASEFLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VLEKGQNIDGQNLYSNENQNLECATEKSKWEDFSNVDSPMMPRITSVFSLQSQQASEFLP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 PEVNQLLQDVLKIKPDVKQDSSNTPNKGLPLHCDQSFQKHEREGKIVESSKDFKVQGIFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PEVNQLLQDVLKIKPDVKQDSSNTPNKGLPLHCDQSFQKHEREGKIVESSKDFKVQGIFP
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 VPPGSVGINVPTNDLNLKFGKEKQVSSIPQDVRDSEKMPRISGFGTLLKTQSDAIITQQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VPPGSVGINVPTNDLNLKFGKEKQVSSIPQDVRDSEKMPRISGFGTLLKTQSDAIITQQL
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 VKDKLRATTQNLGSFYMQSPLLNSEQKKTIIVQTSKGFLIPLNITNKPGLPVIPGNALPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VKDKLRATTQNLGSFYMQSPLLNSEQKKTIIVQTSKGFLIPLNITNKPGLPVIPGNALPL
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA0 VNSQGIPASLFVNKKPGMVLTLNNGKLEGVSAVKTEGAPARGTVTKEPCKTPILKVEPNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VNSQGIPASLFVNKKPGMVLTLNNGKLEGVSAVKTEGAPARGTVTKEPCKTPILKVEPNN
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA0 NCLTPGLCSSIGSCLSMKSSSENTLPLKGPYILKPTSSVKAVLIPNMLSEQQSTKLNISD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NCLTPGLCSSIGSCLSMKSSSENTLPLKGPYILKPTSSVKAVLIPNMLSEQQSTKLNISD
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA0 SVKQQNEIFPKPPLYTFLPDGKQAVFLKCVMPNKTELLKPKLVQNSTYQNIQPKKPEGTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SVKQQNEIFPKPPLYTFLPDGKQAVFLKCVMPNKTELLKPKLVQNSTYQNIQPKKPEGTP
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA0 QRILLKIFNPVLNVTAANNLSVSNSASSLQKDNVPSNQIIGGEQKEPESRDALPFLLDDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QRILLKIFNPVLNVTAANNLSVSNSASSLQKDNVPSNQIIGGEQKEPESRDALPFLLDDL
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA0 MPANEIVITSTATCPESSEEPICVSDCSESRVLRCKTNCRIERNFNRKKTSKKIFSKTKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MPANEIVITSTATCPESSEEPICVSDCSESRVLRCKTNCRIERNFNRKKTSKKIFSKTKT
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA0 HGSKDSETAFVSRNRNCKRKCRDSYQEPPRRKATLHRKCKEKAKPEDVRETFGFSRPRLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HGSKDSETAFVSRNRNCKRKCRDSYQEPPRRKATLHRKCKEKAKPEDVRETFGFSRPRLS
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360      1370      1380
pF1KA0 KDSIRTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADAPEVVSVMKTIAKFNGHVLKVSLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KDSIRTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADAPEVVSVMKTIAKFNGHVLKVSLS
             1330      1340      1350      1360      1370      1380

             1390      1400      1410      1420      1430      1440
pF1KA0 KRTINALLKPVCYNPPKTTYDDFSKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KRTINALLKPVCYNPPKTTYDDFSKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTT
             1390      1400      1410      1420      1430      1440

             1450      1460      1470      1480   
pF1KA0 SENILKAKFNCWFCGRVFDNQDTWAGHGQRHLMEATRDWNMLE
       :::::::::::::::::::::::::::::::::::::::::::
CCDS73 SENILKAKFNCWFCGRVFDNQDTWAGHGQRHLMEATRDWNMLE
             1450      1460      1470      1480   




1483 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 19:39:01 2016 done: Thu Nov  3 19:39:02 2016
 Total Scan time:  4.170 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
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