GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:15:24

Sequence gi568815581f:76769030_77048835 : 279806 bp : 50.50% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    717    842  126  1  0   74   63   114 0.986   8.15
 1.02 Intr +   5968   6142  175  2  1   79   80   171 0.884  14.40
 1.03 Intr +   7377   7512  136  0  1   80   91    77 0.961   7.77
 1.04 Term +   9159   9323  165  2  0   76   39   119 0.996   3.72
 1.05 PlyA +   9770   9775    6                               1.05

 2.03 PlyA -  10452  10447    6                               1.05
 2.02 Term -  12322  12248   75  1  0  112   45    70 0.931   2.94
 2.01 Init -  37477  37340  138  1  0   88   57   121 0.024   7.14
 2.00 Prom -  49327  49288   40                              -5.86

 3.02 PlyA -  51567  51562    6                               1.05
 3.01 Sngl -  57701  57216  486  2  0   43   37   185 0.275   4.97
 3.00 Prom -  59620  59581   40                              -5.16

 4.00 Prom +  63057  63096   40                              -2.86
 4.01 Init +  70367  70454   88  1  1  114   49    38 0.656   3.33
 4.02 Intr +  81394  81644  251  2  2   43  110    79 0.130   2.76
 4.03 Term +  87991  88173  183  0  0   60   38   136 0.506   3.34
 4.04 PlyA +  88835  88840    6                               1.05

 5.00 Prom +  89884  89923   40                              -2.86
 5.01 Init +  93760  93845   86  0  2   74   97    29 0.035   2.75
 5.02 Intr +  99846  99953  108  0  0   57   86    65 0.033   2.60
 5.03 Intr + 103822 103934  113  1  2  165   77   113 0.196  17.92
 5.04 Intr + 113122 113269  148  2  1  101   94   253 0.585  26.49
 5.05 Intr + 133526 133641  116  2  2   90   59   237 0.812  21.09
 5.06 Intr + 134274 134347   74  1  2   51   78    82 0.937   2.63
 5.07 Intr + 135223 135393  171  0  0   65   80   211 0.773  18.14
 5.08 Intr + 136140 136304  165  2  0    2   96   228 0.781  15.16
 5.09 Intr + 136989 137158  170  2  2  121  105   234 0.861  27.14
 5.10 Term + 139267 139270    4  1  1  130   49     0 0.424  -3.32
 5.11 PlyA + 141924 141929    6                               1.05

 6.00 Prom + 142690 142729   40                              -6.16
 6.01 Init + 144686 144755   70  1  1   85   71    91 0.861   8.31
 6.02 Intr + 154031 154081   51  0  0  111   66    55 0.026   4.48
 6.03 Intr + 155894 156068  175  0  1   16   97   196 0.062  12.30
 6.04 Intr + 157568 157701  134  2  2   34   69   370 0.994  29.99
 6.05 Intr + 161456 161557  102  0  0   63   38    89 0.445   1.55
 6.06 Intr + 163616 163746  131  0  2   55  105   390 0.998  37.81
 6.07 Intr + 168959 169114  156  1  0  116   61   336 0.998  33.91
 6.08 Intr + 171373 171519  147  0  0  110  105   257 0.999  30.03
 6.09 Intr + 171703 171819  117  0  0   54   94   245 0.730  22.36
 6.10 Intr + 177347 177421   75  1  0  129   82   162 0.997  19.41
 6.11 Intr + 178801 179057  257  0  2  144   89   182 0.992  20.14
 6.12 Intr + 179611 179782  172  1  1   63   37   318 0.315  24.15
 6.13 Intr + 181650 181674   25  2  1   82   55    31 0.030  -3.20
 6.14 Term + 188596 188801  206  2  2   59   55   134 0.295   4.73
 6.15 PlyA + 189085 189090    6                               1.05

 7.13 PlyA - 190672 190667    6                               1.05
 7.12 Term - 193189 192845  345  1  0   36   47   177 0.302   2.89
 7.11 Intr - 197810 197659  152  0  2   79   64    39 0.196   0.48
 7.10 Intr - 200266 200149  118  1  1   81   60    51 0.290   1.64
 7.09 Intr - 206122 205974  149  2  2   52   59    76 0.095   1.05
 7.08 Intr - 207428 207388   41  1  2   83   87    13 0.036  -1.43
 7.07 Intr - 213874 213809   66  0  0   95   75    59 0.196   3.32
 7.06 Intr - 214187 214073  115  0  1   40   71    70 0.437   0.01
 7.05 Intr - 214739 214689   51  0  0  122   91    16 0.761   4.18
 7.04 Intr - 218044 217993   52  1  1   73  116    32 0.873   2.98
 7.03 Intr - 219418 219270  149  2  2   63   86    87 0.794   5.95
 7.02 Intr - 226700 226527  174  0  0  103   60    54 0.040   4.01
 7.01 Init - 248177 248009  169  2  1   81   50    70 0.266   2.20
 7.00 Prom - 256743 256704   40                              -1.96

 8.03 PlyA - 260021 260016    6                               1.05
 8.02 Term - 268981 268881  101  2  2   78   49    77 0.125   1.09
 8.01 Init - 270929 270824  106  2  1   85   54    89 0.187   5.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  44088  44006   83  1  2  110   45    58 0.806   1.56
S.002 Init -  49134  49099   36  0  0   76   81    49 0.866   2.06
S.003 Init + 155980 156068   89  0  2   94   97   215 0.831  23.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_1|200_aa
XLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNRFGRNP
VVLLGILVHFIAFYLIFLNMPGDAPIAPVKGTDSSAYIKSSKEVAILCSFLLGLGDSCFN
TQLLSILGFLYSEDSAPAFAIFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFFGTISF
FTVEWEAAAFVARGSDYRSI

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_1|603_bp
ngtctggaattaactttcttctctggtgtatatggaacctgtattggtgctacaaataaa
tttggagcagaagagaaaagccttattggactttctggcattttcatcggcattggagaa
attttaggtggaagcctcttcggcctgctgagcaagaacaatcgttttggtagaaatcca
gttgtgctgttgggcatcctggtgcacttcatagctttttatctaatatttctcaacatg
cctggagatgccccgattgctcctgttaaaggaactgacagcagtgcttacatcaaatcc
agcaaagaagttgccattctctgcagttttctgttgggccttggagacagctgctttaat
acccagctgcttagtatcttgggctttctgtattctgaagacagcgccccagcatttgcc
atcttcaagtttgttcagtctatttgcgcagccgtggcatttttctacagcaactacctt
ctccttcactggcaactcctggtcatggtgatatttgggttttttggaacaatttctttc
ttcactgtggaatgggaagctgccgcctttgtagcccgcggctctgactaccgaagtatc
tga

>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_2|70_aa
MRLHSSALGWSMGLGALEQVAALIGEARAGQEPTAGAGRLRHSRLQLSLLVTFDGDSCHV
VGCPEDYSVA

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_2|213_bp
atgcgcctgcactcctcagcccttgggtggtcgatgggactgggtgccctggagcaggtg
gcggcgctcattggggaggctcgggcagggcaggagcccacggcgggggcggggaggctc
agacatagcaggctgcagctgtccttgcttgtgacctttgatggagacagctgccatgtc
gtaggctgccctgaggactactccgtagcatga

>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_3|161_aa
MQFQQQKCTITPARKQQVQASYYSAFDSPALTWLLTAFTRRNLNLHRNDETGAEGDIPEP
GRLQASFPPQPILSAEWGREVLLASCWTAAALACGSYTHSLTGTSAGRNRIGYLHLNAPL
PLTGTCHCSVQSCPPRCLEGLCGTAEYTRTQRRGASLNTVT

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_3|486_bp
atgcaatttcagcagcagaaatgcaccatcactccggccaggaagcagcaggtacaggca
tcttattactcggcatttgatagcccggctctcacttggttgttaacagccttcacaaga
agaaacctcaatctgcaccgaaatgatgagaccggtgcagagggagacatcccggagcct
ggacgccttcaggcctcgtttcctccccagcccatcctcagcgcagagtgggggagagaa
gtcctgcttgcctcatgttggacagcagccgcccttgcatgtggaagttacacacactca
ctcacagggaccagcgcagggagaaacagaattggctacctccacctcaatgctcccctt
ccgctcacgggcacctgccactgctctgtccagtcctgccctccacggtgccttgagggc
ctgtgtggtacagccgagtacaccaggacccagcgaagaggtgcctccctcaacactgtc
acatag

>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_4|173_aa
MPGPNRFFCHVGDVLSVLCNTVAMSHVQGGRIVRKPRRGLLEENDAEHPGPWTASSPEAD
RSLDNSGQGAWRAAPTCRSGPYLCCLNSSFKARAAKDSQDILPPKAVELGRPRRTKQGPR
LSHGILYTAMEAGAEMDQQRGPSATPPIYFPSVEDGKVMAVSVWQAPTWNWTP

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_4|522_bp
atgcccggccccaacagatttttctgccatgttggagatgttctctctgtgctgtgcaac
acagtagccatgagccacgtgcaaggtggccggattgtcaggaaaccaaggaggggcctt
ttggaagagaatgatgctgagcatccgggtccctggacagccagcagccctgaggcagac
agaagtttggacaactcaggacagggagcttggagggcagcccctacatgtcggagtggt
ccctacctgtgttgcctcaactcttccttcaaggcaagagccgctaaggacagtcaggac
atcctaccgcccaaggctgttgagctcggccggccaaggaggacaaagcaggggccacgg
ctctcccacggcatcctctatacagccatggaggctggagcagagatggaccaacaaagg
ggtccatctgccacaccccccatctacttcccttctgttgaagatgggaaggtcatggct
gtctcagtgtggcaagctcccacctggaactggacaccataa

>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_5|384_aa
MVNGLFLFSLYTPQAPSMSSKNNLEAFRRPEQRGHRAARSQLRSDAASARRGFVARTRRE
LGPGRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTEVMGGPESRGVLRKMSDLL
ELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMERIQAIAQNVSDIAVKVDQI
LRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWTSDPCYAFFGVDGTECSFL
IYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHLLDLMGSGKESLIFMKKRT
KRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDVFSPRVLKGGPLGEMVQWA
DILTALYVLGHGLRVTVSLKELQR

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_5|1155_bp
atggtaaatggcttgtttctcttctccctctacacaccccaggccccgtctatgagctct
aaaaacaaccttgaagccttcagaaggcctgagcagcgaggccaccgggccgcgcgctcc
cagcttcgctcggacgcggcttcggcccgcagagggttcgtggcccggacgcggcgagag
ctgggcccaggacggctttttgtcctgggcatcggcttcttcactctctgcttcctgatg
acgtctctgggaggccagttctcggcccggcgcctgggggactcgccattcaccatccgc
acagaagtgatggggggccccgagtcccgcggcgtcctgcgcaagatgagcgacctgctg
gagctgatggtgaagcgcatggacgcactggccaggctggagaacagcagtgagctgcac
cgggccggcggcgacctgcactttcccgcagacaggatgccccctggggccggcctcatg
gagcggatccaggctattgcccagaacgtctccgacatcgctgtgaaggtggaccagatc
ctgcgccacagtctgctcctgcacagcaaggtgtcagaaggccggcgggaccagtgtgag
gcacccagtgaccccaagttccctgactgctcagggaaggtggagtggatgcgtgcccgc
tggacctctgacccctgctacgccttctttggggtggacggcaccgagtgctccttcctc
atctacctcagtgaggtcgagtggttctgccccccgctgccctggaggaaccagacggct
gcccagagggcacccaagcccctccccaaagtccaggcagttttccgaagcaacctgtcc
caccttctggacctgatgggcagcgggaaggagtccctgatcttcatgaagaagcggacc
aagaggctcacagcccagtgggcgctggctgcccagcgcctggcacagaagctgggggcc
acccagagggaccagaagcagatcctggtccacatcggcttcctgacggaggagtccggg
gacgtgttcagccctcgggtcctgaagggcgggcccctaggggagatggtgcagtgggcg
gacattctgactgcactctatgtcctgggccatggcctgcgggtcacagtctccctgaag
gagctgcagagatag

>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_6|605_aa
MGACEKMLLEGDVASNTLLIEKPTLSAGDQKHHRHGTTLDGGFLGAQNLKGSSLSNLGVP
PGRGSCPLTMPLPFDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYA
TLHGYRTNWGYWNLNPKQFMTMFPPSVREGRLNILGLNKRFIRDPSAQKAGLVCLQIPHT
PDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKGKEKFLGILNKYMEIHGTV
YYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGPAPLEAIANGCIFLQS
RFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYNNSEEFEAAIKAIMRT
QVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSPFVLAPNATHLEWARN
TSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLNSQDAFLKLQVPCDST
ESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDFRKGQLAVTVAAREED
PGTHREEIPVKTEAEIRAMQLRQQTLRPAGDRRKLGGQRWTLLWRLQREYGPAGTLMLDF
WPLEL

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_6|1818_bp
atgggtgcctgtgagaagatgcttctagaaggagatgtggccagcaacacattgctcatt
gaaaagccaacgctgtcggcaggtgaccagaaacatcatcgacacggcaccactttggac
ggtgggtttcttggggcccagaatctgaagggctcttctctcagtaacttaggggtaccg
ccaggccggggaagctgcccgctcaccatgcccctgcccttcgacctcatctacaccgac
taccacggcctgcagcagatgaagcggcacatgggactctccttcaagaagtaccggtgc
cgaatcagggtcatcgacaccttcgggacggaacctgcgtacaaccacgaggagtacgcc
acgctgcacggctaccggaccaactggggctactggaacctcaaccccaagcagttcatg
accatgtttcccccttccgtgcgggaaggtagattaaatatccttggactcaataaacgg
tttattcgggatcccagtgcgcagaaggcagggctcgtgtgcctgcagattcctcatacc
cccgacaactccttcatgggcttcgtgtccgaggagctcaacgagacggagaagcggctc
atcaaaggcggcaaggccagcaacatggccgtggtgtacggcaaggaggcgagcatctgg
aaggggaaggagaagttcctgggcatcctgaacaaatacatggagatccatggcaccgtg
tactacgagagccagcggccccccgaggtgccagcctttgtgaagaaccacggcctctta
ccgcagcctgagtttcagcagctgctgcgcaaggccaaactcttcatcgggtttggcttc
ccctacgagggccccgcccccctggaggccatcgccaatggttgcatcttcctgcagtcc
cgcttcagcccgccccacagctccctcaaccacgagttcttccgaggcaagcccacctcc
agagaggtgttctcccagcatccctacgcggagaacttcatcggcaagccccacgtgtgg
acagtcgactacaacaactcagaggagtttgaagcagccatcaaggccattatgagaact
caggtagacccctacctaccctacgagtacacctgcgaggggatgctggagcggatccac
gcctacatccagcaccaggacttctgcagagctccagaccctgccctaccagaggcccac
gccccgcagagcccctttgtcctggcccccaatgccacccacctcgagtgggctcggaac
accagcttggctcctggggcctggccccccgcgcacgccctgcgggcctggctggccgtg
cctgggagggcctgcaccgacacctgcctggaccacgggctaatctgtgagccctccttc
ttccccttcctgaacagccaggacgccttcctcaagctgcaggtgccctgtgacagcacc
gagtcggagatgaaccacctgtacccggcgttcgcccagcctggccaggagtgctacctg
cagaaggagcctctgctcttcagctgcgccggctccaacaccaagtaccgccggctctgc
ccctgccgcgacttccgcaagggccagctggctgtgacagtggccgcacgagaagaggac
ccggggacacacagggaagaaatccctgtgaagacagaggcagagatcagagccatgcag
ctgcgccagcaaacactaaggcctgctggtgaccgccggaagctgggagggcaaagatgg
acccttctctggcgccttcagagggaatacggccctgctggcaccctgatgctggacttc
tggcctctagaactgtga

>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_7|526_aa
MTTEVMYCQESVGDCCAQLSECVLNGSVKRLLNQSDSILDRGWENEFEACWAAFPGAQQP
DAKRCTFWGGTFLIFHKLNILKTKLRLCLQPSVATSYYLREGAGAMHLLMFASRAAPAGI
KLLLYIRGSQLLLPLGYSDTVLQLPGHCRGPLLPIATSPTDCDKGLDEAVSTNSLALVKP
QGSNPGSHVASSQTPVRIGRCAPEAVQAKVTRGGGHRLMQGCVGWQLGLTVQGGAVRELF
IYPQVFSEQNLPGCLDENSLYEDNICLLKKSKALADPGAFMGLREEEVYGQPWVGSEKAP
VPTSVSGTGSLAPSLQDLPGLKLIRTSGPKDANEGPRQVISLANEAAAPALFPLEYLINT
AEGASQFTQEGETLRTLPVIFSGKPFLSSPPTSSQQPGSALPELQGLAQALQWQGDAGPR
SDHKSHIDCQILDEQALKSCLCRLQSGSPGPGLGCQEHSGLRRGFQSVGQGWGKGGPGGA
TGHTGQKHLPPGWHFTFGKLLHWIMKTFVFSKARKKRITITTSQGT

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_7|1581_bp
atgaccacagaagtcatgtactgtcaagagagcgtgggggactgttgtgcgcagctttca
gaatgtgtccttaacggaagtgtcaagagacttttgaaccagagtgactccatcttggat
aggggctgggaaaatgagtttgaggcctgctgggctgcattccctggagctcaacagcct
gatgccaaaaggtgcacattttggggcggcacatttctgatcttccacaagctgaatatt
ctgaagaccaaattaagactgtgtttgcaacccagcgtggccacgagctattacctaaga
gaaggagctggggccatgcatttgctaatgtttgcatccagggctgctccagcaggaatt
aaattgctcctctacatccggggatcccagttgctattgcccctcgggtactcggacact
gtcctccaactacctggtcactgcagaggccctctcctccccatcgctacctcccccacc
gactgtgacaagggtttggacgaagcagtctcaacaaactctttggccctcgtcaagcct
caaggatctaatccagggtcccacgttgcctctagtcagacaccagtcagaattgggagg
tgcgctccagaggctgtgcaggccaaggtgacacgaggaggcggccacaggctgatgcag
ggctgcgtgggctggcagttaggactgacggtacaaggaggggcagttagggagctgttc
atctacccacaagtgttctctgagcagaacctcccaggatgcttggatgagaacagcctt
tatgaagataacatatgcctgttgaaaaaatcaaaagctctggctgatcctggggctttt
atgggcctcagagaggaggaagtgtatgggcagccatgggtgggctcggaaaaggcacca
gttcccacttcagtcagtgggactggcagcctggcccctagccttcaggacctccctggc
ctgaagctaatcagaacctctgggccgaaagatgcaaatgaagggcctcgtcaagtcatt
tcccttgcaaatgaagctgccgctccggcgctttttcctcttgaatacctcatcaacacc
gcagagggggcttctcagttcacccaggagggagagaccctcagaactctgccagtcatc
ttctcagggaagcctttcctgtcctcacctcccacctcgtcccagcagcccggctctgcg
ttgccagaactccagggcttagctcaggccctacagtggcaaggggacgcagggccccgc
tcagaccacaagtcgcacatcgactgtcaaatcctcgatgagcaggctctgaagagttgc
ctgtgccggctgcaatctggctcgcctgggcccgggctggggtgccaggagcactctgga
ctgaggcggggcttccagagcgtggggcagggctgggggaaaggagggcctggaggagcc
acaggccacaccggacaaaaacaccttccaccagggtggcacttcaccttcgggaagctc
cttcactggataatgaagacttttgtcttcagcaaagcgaggaagaaaagaattaccatt
accaccagccaaggcacctga

>gi568815581f:76769030_77048835|GENSCAN_predicted_peptide_8|68_aa
MANAGFGRSGHMSSQVRTPGLQALELQAPNPSGDFEVSASNKLVSHQSSIGAMCLATFYC
VVWRIPTG

>gi568815581f:76769030_77048835|GENSCAN_predicted_CDS_8|207_bp
atggccaatgccggatttggcagatcaggccacatgagcagccaggttaggacaccgggg
cttcaagctttggaactgcaggctccaaacccctctggagactttgaagtatctgctagt
aataagctggtgtctcatcagtccagtattggtgccatgtgtctggccaccttctactgt
gtagtgtggaggattcccacagggtga