GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:03:44

Sequence gi568815592f:34426306_34632527 : 206222 bp : 50.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7352   7421   70  1  1   64   70   101 0.943   7.11
 1.02 Intr +   9716   9827  112  0  1   74   31    35 0.275  -4.16
 1.03 Intr +  12299  12370   72  2  0  107   67    72 0.354   5.52
 1.04 Intr +  12816  12911   96  0  0   69   69   118 0.295   7.12
 1.05 Intr +  22155  22193   39  0  0  125  103    31 0.773   5.64
 1.06 Term +  22911  23025  115  0  1   53   42    99 0.719  -0.16
 1.07 PlyA +  23684  23689    6                               1.05

 2.00 Prom +  24343  24382   40                              -6.56
 2.01 Init +  29441  29447    7  1  1  114  100     0 0.372   4.99
 2.02 Intr +  39819  39965  147  1  0  133   91    80 0.849  13.01
 2.03 Intr +  46410  46452   43  1  1  138  116    -5 0.498   4.60
 2.04 Intr +  59964  60099  136  0  1   78  111    40 0.072   5.87
 2.05 Intr +  61893  62016  124  2  1   91   37    25 0.071  -2.14
 2.06 Term +  63439  63506   68  2  2  104   44    77 0.250   3.00
 2.07 PlyA +  66622  66627    6                               1.05

 3.04 PlyA -  67850  67845    6                               1.05
 3.03 Term -  69826  69656  171  1  0   87   44    63 0.171  -0.37
 3.02 Intr -  71305  71222   84  1  0   47  105    27 0.102   0.32
 3.01 Init -  88920  88831   90  0  0   62   62   152 0.347   8.49
 3.00 Prom -  91083  91044   40                              -7.96

 4.05 PlyA -  92505  92500    6                               1.05
 4.04 Term -  94400  94288  113  0  2  108   50   107 0.914   7.62
 4.03 Intr -  94909  94757  153  2  0   90   92    94 0.817  10.04
 4.02 Intr -  95546  95444  103  2  1  109   43    17 0.573  -0.95
 4.01 Init -  96645  96580   66  0  0   56  113     6 0.337   0.98
 4.00 Prom -  97209  97170   40                              -7.16

 5.00 Prom +  98066  98105   40                             -11.14
 5.01 Init + 100001 100063   63  1  0   72   78   106 0.955   9.15
 5.02 Intr + 101027 101183  157  1  1   35   42   446 0.855  34.28
 5.03 Intr + 102337 102572  236  2  2   90   32   428 0.684  34.81
 5.04 Intr + 103092 103247  156  2  0  108   48   236 0.919  21.81
 5.05 Intr + 103361 103584  224  1  2   90   46   414 0.679  34.33
 5.06 Intr + 103938 104058  121  0  1   38   78   160 0.999  10.50
 5.07 Intr + 104155 104282  128  0  2   79  109   113 0.999  11.98
 5.08 Intr + 105295 105482  188  1  2   69   74   428 0.992  38.83
 5.09 Term + 106116 106225  110  1  2  122   44   213 0.999  18.97
 5.10 PlyA + 109927 109932    6                               1.05

 6.08 PlyA - 111518 111513    6                               1.05
 6.07 Term - 112147 111969  179  2  2   71   48   457 0.998  37.85
 6.06 Intr - 113091 112945  147  1  0   63   84   181 0.991  15.41
 6.05 Intr - 113257 113210   48  2  0  112   77    17 0.758   1.65
 6.04 Intr - 114876 114679  198  1  0   33   91   324 0.967  26.52
 6.03 Intr - 117303 117223   81  1  0   96   58    40 0.721   1.41
 6.02 Intr - 118351 117715  637  1  1   83   99   640 0.360  56.27
 6.01 Init - 124735 124640   96  1  0   65   61    92 0.160   2.52
 6.00 Prom - 126770 126731   40                              -7.86

 7.00 Prom + 127319 127358   40                              -8.86
 7.01 Init + 128630 128705   76  1  1   62   66   130 0.627   7.54
 7.02 Intr + 128929 128963   35  2  2  128   69    24 0.595   2.44
 7.03 Intr + 131056 131256  201  0  0   69   45   104 0.511   3.68
 7.04 Intr + 132966 133036   71  2  2   73   76    58 0.324   1.08
 7.05 Intr + 141132 141249  118  0  1   42   72    49 0.069  -0.83
 7.06 Intr + 143799 144013  215  2  2   39   94   157 0.388   8.91
 7.07 Intr + 146376 146533  158  0  2   64   89   115 0.852   8.85
 7.08 Intr + 149960 150196  237  0  0   60    9   200 0.229   6.89
 7.09 Term + 152641 152705   65  2  2   71   55    77 0.437   0.75
 7.10 PlyA + 153195 153200    6                               1.05

 8.06 PlyA - 153406 153401    6                               1.05
 8.05 Term - 157865 157714  152  0  2  117   29    89 0.599   3.97
 8.04 Intr - 161971 161860  112  1  1  113   89    -9 0.636   1.65
 8.03 Intr - 167754 167647  108  0  0   63   81    86 0.697   5.88
 8.02 Intr - 180599 180250  350  0  2   77  100   116 0.709   6.78
 8.01 Init - 180901 180865   37  1  1   59  107    30 0.830   2.18
 8.00 Prom - 187571 187532   40                              -5.26

 9.00 Prom + 188233 188272   40                              -8.16
 9.01 Init + 190233 190346  114  2  0  110   44   148 0.921  12.81
 9.02 Intr + 204863 204937   75  1  0   72   91    24 0.002   0.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_1|167_aa
MIHIAVEVVYTGGHHVAVNVYAQGSIPLNEYTKIVYAFFLDGHLSCYQFLAITNKAARSI
RSLDKALILSTNCQSEKSLNPPNERAVTLTTKIRGFIFEVSETKNPPEGANSGHTDLLSQ
GWQGIRPYRWSTGKADAIWRFHFLSHGTGSLQIGEQALSLTPAVFCA

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_1|504_bp
atgatccacattgctgtggaggtggtctatactggaggccatcacgttgctgtcaatgtc
tatgctcaaggaagtattccactgaatgaatataccaaaatagtttatgcattcttcctc
gatggacatttgagttgttatcagtttttggctatcaccaataaagctgctagaagcatc
aggtctttagacaaagctttaattctttcaaccaactgccaatcagaaaaatctttgaat
ccacctaatgaaagagctgtaacactcaccaccaagatccgtggcttcatttttgaagtc
agcgagaccaagaacccaccagaaggagccaattctggacacactgacctgctctcccag
ggctggcagggcatacggccctatcggtggagcactggcaaggctgatgccatatggcgg
ttccacttcctcagccatggaactggatctttgcaaattggagagcaggcgctgagcctc
actcctgctgtcttctgtgcctga

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_2|174_aa
MPTPARSQSDAVAAAAPAPSSPGKSAGLEAGPQTSRFAPSRRRWSPELLPPGLWCLKPGG
MGKGVRAQLSAEREGGGGVVKYLSPMWFSQPWGEVGAIIPALKMRKQEGGQTLTIALSHF
PSIPGKGAPRDVPGNYLAAKAIILPCPLPYKQWGHDASLGPQTNVHVDPMSDSL

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_2|525_bp
atgcccaccccggcgagatcccagagcgacgcggtggcggcggcagcgccagccccctcc
tcccccgggaagtcggccgggcttgaggccgggccccagacgtcccgcttcgccccgagt
cgccgccgatggtccccggagctcctgcccccaggcctgtggtgcctgaaacctggcggg
atgggaaagggggtaagagcacagctgtcagctgagagggagggaggaggaggtgttgta
aaatatttgtctccaatgtggttctcacagccatggggtgaagtaggtgccatcatcccc
gctttgaagatgagaaaacaggaagggggccagaccctgaccattgccctttcccatttc
ccatcaataccaggcaagggagcaccaagagatgtcccagggaattacctggctgccaag
gctattattcttccctgccccttgccatacaaacagtggggccacgatgcctctttgggt
ccccagaccaatgtccatgtggaccctatgtctgacagtctttga

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_3|114_aa
MLAAPHTPLPSLVPGPAPPAGLFGSYQVPLNQRGVAAWGQGWGTHTLGGDSKKEEELKAA
FSPMAQSPASAQLAASLLSSYNHTGEQQAAGFIPVVGMGKLRLSFTKDKGPVNS

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_3|345_bp
atgctggctgcgccccacaccccgctccccagcctggtccctggcccggcccctccagct
ggcctgtttggctcctatcaggtgccgctgaatcagagaggtgtggctgcctgggggcag
ggctggggcacgcacacccttggaggggattccaagaaggaggaagagctcaaggctgcc
tttagtcctatggcacaatcacctgcatctgcacaacttgctgcctctctgctctccagc
tacaaccacacaggggagcagcaggcagctggcttcatccctgttgtagggatggggaaa
ctgaggctcagcttcaccaaggataaggggcctgtaaacagttga

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_4|144_aa
MQCGRAPPNRLRAQREGKGRGKASASASVKWAVARIKRSTRPRATGPRLTHGELSTALVT
TGHGIHSTAFITLRVLLPTGMSLSPVSGVYLSGYLPYFQHPVQCRQHRVLQHAGGINNTT
IFERLLCAIVSASSHALSPNLTAH

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_4|435_bp
atgcaatgtgggcgggcaccacccaatcggctgagggcccagagagaaggaaaaggcaga
ggaaaggcctcggcgtccgcatctgtaaaatgggctgttgcaaggattaaacggagcact
agacctcgggccactggaccgcgcctgacacacggcgagctctccacagccctcgtcacc
accggacacggcatccacagcacggcattcatcacgttgcgtgtcctccttcccacagga
atgtcacttagtccagtcagcggtgtttatctgtctggttatctgccgtatttccagcat
ccagtgcagtgccggcaacatagggtactgcagcacgcaggcggcatcaacaacacaacc
atttttgagcgcctactgtgtgccattgtgagcgcctcctcacatgctttatctccaaac
ctcacagcccactga

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_5|460_aa
MSSSYDEASLAPEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQQL
TDWAKRWRQLIEKGPQYGSLERAWGAIMTEADKVSELHQEVKNNLLNEDLEKVKNWQKDA
YHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTE
QSVTPEQQKKLQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEK
RLVFLKEVLLDIKRHLNLAENSRYLGMAGTEGTGTASRCYIHVYRELEQAIRGADAQEDL
RWFRSTSGPGMPMNWPQFEEWNPDLPHTTTKKEKQPKKAEGVALTNATGAVESTSQAGDR
GSVSSYDRGQPYATEWSDDESGNPFGGSETNGGANPFEDDSKGVRVRALYDYDGQEQDEL
SFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_5|1383_bp
atgtccagctcctacgatgaggcctcactggcgccagaggagaccaccgacagcttctgg
gaggtggggaactacaagcggaccgtgaagcgcatcgatgacggccaccgtctatgcaac
gacctgatgaactgcgtgcaggagcgcgccaagatcgagaaggcgtacgggcagcagctc
accgactgggccaagcgttggcgccagctcatcgagaaaggcccacagtatggcagcctg
gagcgggcctggggtgccataatgacagaggcagacaaggtgagcgagctgcaccaggag
gtgaagaacaatctgctgaatgaggacctggagaaggtgaagaactggcagaaggacgcc
tatcacaagcagatcatgggtggcttcaaggagacgaaggaggctgaagatggcttccgc
aaggcccagaagccttgggccaagaagatgaaggagctggaggcagccaagaaggcctac
catttggcttgcaaagaggaaaagctggccatgacacgggagatgaacagcaagacggag
caatcggtcacacctgagcagcaaaagaagctgcaggacaaagtggacaagtgcaagcag
gatgtgcagaagacacaggagaagtatgagaaagtgctggaagatgtgggcaagaccaca
ccccagtacatggagaacatggagcaggtgtttgagcaatgccagcaatttgaggaaaag
cggctggtcttcctcaaggaggtgctgctggacatcaaacggcacctcaacctggctgag
aacagcaggtacctgggcatggcaggcaccgagggcacaggcacagccagcagatgctac
atccatgtgtaccgtgagctggagcaggccatccggggggctgatgcccaggaagacctc
agatggttccgcagcaccagtggccccggcatgcccatgaactggccccagtttgaggag
tggaacccagaccttcctcacaccaccaccaagaaggagaaacagcctaagaaggcagag
ggagtggcgctgaccaatgccactggggcggtagagtccacatcccaggctggggaccgc
ggcagtgttagcagctacgacagaggccagccctacgccaccgagtggtcagacgacgag
agtgggaacccctttgggggcagtgagaccaacgggggcgccaacccctttgaggacgac
tccaagggagtgcgcgtgcgggcactctacgactatgacggccaggagcaggacgagctc
agctttaaggccggagacgaactcaccaagctgggcgaggaggatgagcagggctggtgc
cgtgggcggctggacagcgggcagctgggcctctaccctgccaactacgtggaggctatc
tag

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_6|461_aa
MLAAPAGRARQSSLFSLTFLLSQKALEVVPVRPEGLSAQPCRGCPMTRKPPTLSQAQPTV
HRAPHPHNQLSGPHRDGEAVKPESSFISVDTAASPNSSGMGSASPGLSSVSPSHLLLPPD
TVSRTGLEKAAAGAVGLERRDWSPSPPATPEQGLSAFYLSYFDMLYPEDSSWAAKAPGAS
SREEPPEEPEQCPVIDSQAPAGSLDLVPGGLTLEEHSLEQVQSMVVGEVLKDIETACKLL
NITAGLGSDGTIRMRPSLTPPLKLLPMSTGHDPMDWSPSNVQKWLLWTEHQYRLPPMGKA
FQELAGKELCAMSEEQFRQRSPLGGDVLHAHLDIWKSAAWMKERTSPGAIHYCASTSEES
WTDSEVDSSCSGQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIR
KNRPAMNYDKLSRSIRQYYKKGIIRKPDISQRLVYQFVHPI

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_6|1386_bp
atgctggctgccccagctgggagggcccggcaaagcagtttattcagtttgaccttcctc
ctgtcccagaaagcgctggaagtagtgccagtgaggccagaaggcctgtctgcccaacca
tgtcgtggctgcccaatgacccggaagcccccaactctgtcccaggcccagcccactgtc
cacagggcccctcatccccataaccagcttagcggcccccacagggatggagaagcagtc
aaacctgagtcctctttcatttccgtagacacagccgccagcccaaacagcagcggcatg
ggcagcgccagcccgggtctgagcagcgtatcccccagccacctcctgctgccccccgac
acggtgtcgcggacaggcttggagaaggcggcagcgggggcagtgggtctcgagagacgg
gactggagtcccagtccacccgccacgcccgagcagggcctgtccgccttctacctctcc
tactttgacatgctgtaccctgaggacagcagctgggcagccaaggcccctggggccagc
agtcgggaggagccacctgaggagcctgagcagtgcccggtcattgacagccaagcccca
gcgggcagcctggacttggtgcccggcgggctgaccttggaggagcactcgctggagcag
gtgcagtccatggtggtgggcgaagtgctcaaggacatcgagacggcctgcaagctgctc
aacatcaccgcaggtcttggctcagatggcaccatccgcatgaggccttccctgacccct
ccattaaaattgctgcccatgagcacaggacatgatcccatggactggagccccagcaat
gtgcagaagtggctcctgtggacagagcaccaataccggctgccccccatgggcaaggcc
ttccaggagctggcgggcaaggagctgtgcgccatgtcggaggagcagttccgccagcgc
tcgcccctgggtggggatgtgctgcacgcccacctggacatctggaagtcagcggcctgg
atgaaagagcggacttcacctggggcgattcactactgtgcctcgaccagtgaggagagc
tggaccgacagcgaggtggactcatcatgctccgggcagcccatccacctgtggcagttc
ctcaaggagttgctactcaagccccacagctatggccgcttcattaggtggctcaacaag
gagaagggcatcttcaaaattgaggactcagcccaggtggcccggctgtggggcatccgc
aagaaccgtcccgccatgaactacgacaagctgagccgctccatccgccagtattacaag
aagggcatcatccggaagccagacatctcccagcgcctcgtctaccagttcgtgcacccc
atctga

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_7|391_aa
MAIIKDTGYAGLMAWVWAAGRPQLIEIWQILEMSTFEGALYLAVIVTGTLVEDQLSVIPQ
RRLREDGAEEGEVTQGPEMVHSTTPNPQWSSPPGSIKKDTLRFQGLADHQPGHVFDKCHL
TPHSNTHRCLLCAYFNKSTDTDLLDEGKDNWEDHALDQVTVRGREWRQSCVTTEAAPTSP
CRLVTLKLFCPLDTAFASCQRSQDPRAQSGTQLAAAAGSMTRPASRVSLTNLPGVATGRS
YRTGGRHCTQPTSNPLTNPVVPIAQMGKLRPKLHPAGPSEQKGEVYLAEGTSLEDQHPDD
DEQNGHEDVHNQGSDVQALGGGGIRLGPSQVTNHLPVPRLHGISKCYEAQAAGVHEEGVE
QGSDDTVGHGDIHDGRYPQLLHTPPQTSPSQ

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_7|1176_bp
atggccatcataaaggacacaggctacgcggggctcatggcctgggtgtgggctgctggg
cggccccagctgatagaaatctggcaaatcttagaaatgagcaccttcgagggagccctg
tacttggctgttatcgtcactggcaccttggttgaggatcagttatcagtcattccccag
agaaggttgagggaggatggagcggaggaaggggaggtaacacaaggtcctgaaatggta
cactcgaccactcctaatccccaatggtccagccctccagggtcaataaagaaagacacg
ctgcgtttccagggccttgctgaccaccaacctggccacgtgtttgacaaatgccatctt
actcctcacagcaacactcacaggtgtttactatgtgcctatttcaacaaatcaacagat
accgacttgttggatgaaggaaaggacaactgggaggatcatgcgctggatcaagtcaca
gtcaggggaagggaatggaggcagtcctgcgtgaccacagaagctgcccccaccagcccc
tgccggctggtgacccttaaactcttctgccctcttgacacggcttttgcgtcatgtcag
agaagccaggatccccgcgcccagtctgggacgcagttggcagcagctgcaggaagcatg
acccgcccagcatctcgggtgtcactcacgaacctcccaggtgtcgctactggcaggtcc
taccgcacagggggcaggcactgtacccagcccacctccaaccccctcaccaaccctgtt
gttcccattgcacagatgggaaaactgaggcccaagctccatcctgcagggccctcggaa
cagaagggtgaggtgtatctggctgaagggacaagcttggaagatcaacacccggatgat
gatgagcagaatggtcatgaggatgtccacaatcagggctcagatgttcaggcacttggc
ggtggaggcatacgcctgggccccagtcaggtcaccaaccatcttcctgtccctagactt
cacggaataagcaaatgctatgaagcccaggcagcaggggttcacgaagagggtgttgaa
cagggatcagacgacacggtcgggcacggagatatccacgatggtcgctaccctcagctg
cttcacacaccacctcaaacatcaccttctcagtga

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_8|252_aa
MISKDDGALASTDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPFASPQK
NRQSDENNLKDPGGSEFDSISKNTWAPAPDTWAPAPDQTEQDQNRLSQNSVNLSPSSHAN
NLSVVTYSKAGIVVGYQNLLHQVLELQWNLKCGWASRFESTSIQKATTLGKLNVPSTLSP
FPRTNHFCAHPWRRDELLAEGQNSFAPTHSLLVTADGYGVDEGMDGVQARGDTTQEPGCK
CMEEWSQSPSRA

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_8|759_bp
atgatttccaaagatgacggtgcattggcatcaactgatgtcatctgggtgattctcagt
gtggaggtgggtggacttttaggagtaacgcagcagctgtcatcttttgaaacggagttc
aacacacagccgcatcgtaaggtagaaggaaacttcaacccttttgcctctccccaaaag
aaccgacaatcagatgaaaacaacttaaaagaccctgggggctccgagttcgactcgatc
agcaaaaacacatgggctcctgctcctgacacatgggctcctgctcctgaccaaactgag
caagaccagaatagactgtcacagaactctgtaaatctgtctcccagcagtcacgcaaac
aacttatcagtagtgacttacagtaaggctgggattgtcgttggctaccagaacctgtta
caccaggtcttagaactccagtggaatctgaaatgtggatgggcctcccggtttgaaagt
acctccatccagaaggcaaccacacttggcaagttaaatgtcccaagcaccttgtctccc
ttcccaagaacaaaccatttctgtgcacatccttggaggcgagatgagctccttgcagag
ggccagaactcttttgcccccacacactccctgctggtcacagcagacggttatggagta
gatgagggaatggatggtgtccaggccaggggtgacaccacccaggaaccaggctgcaag
tgcatggaggagtggagccagagccctagtagggcctag

>gi568815592f:34426306_34632527|GENSCAN_predicted_peptide_9|63_aa
MEGVEEKKVPAVPETLKKKRRNFAELKINRLRKKFAQKYTLLKGRQDVLAKRNCSKEASS
NVM

>gi568815592f:34426306_34632527|GENSCAN_predicted_CDS_9|189_bp
atggagggtgtcgaagagaagaaggttcctgctgtgccagaaacccttaagaaaaagcga
aggaattttgcagagctgaagatcaatcgcctgagaaagaagtttgcccaaaagtatacc
ctgctgaaaggtagacaggatgtactggctaaaagaaactgtagtaaagaagccagtagt
aatgtaatg